BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0450.0014.p (152 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C4L2R6.1 C4L2R6_EXISA Putative uncharacterized protein 96 1e-18 B1YEC1.1 B1YEC1_EXIS2 Putative uncharacterized protein 93 8e-18 A8VRP3.1 A8VRP3_9BACI Putative uncharacterized protein 83 9e-15 A7GNX6.1 A7GNX6_BACCN Putative uncharacterized protein 66 8e-10 C3B2M4.1 C3B2M4_BACMY Putative uncharacterized protein 64 4e-09 >C4L2R6.1 C4L2R6_EXISA Putative uncharacterized protein Length = 163 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 82/134 (61%) Query: 15 LTVTLPQIKQAVRQFEEDMPAPINRTALIMEDKSIDLSRLKRYLGGVPEQKFYMSRETFE 74 + +TL +++ A+ ++E+ +P +NRT L+ + + ID RLK +L G+P+Q+F+MS+ETF Sbjct: 27 IDITLSELRHAIHEYEQTLPKGVNRTVLLDDSQEIDTKRLKHHLSGIPKQRFFMSKETFH 86 Query: 75 IFEESDKLVPYYLDLVQSAVDNYISDTGKLPLVEDAWLPEVHYRLLATERYLKETPPFPL 134 I E ++ V Y +D VQ A+D Y+ KLPL + ++ L YLK P P Sbjct: 87 IVPEDERDVIYEMDQVQRALDLYMDQEKKLPLQKFQNALQLDLTCLREGGYLKTLPKRPY 146 Query: 135 YITEEEMMLTHRPE 148 Y+ +E ++++ P+ Sbjct: 147 YVVDETLIVSLEPK 160 >B1YEC1.1 B1YEC1_EXIS2 Putative uncharacterized protein Length = 154 Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 81/144 (56%) Query: 5 RAKKNSPTVPLTVTLPQIKQAVRQFEEDMPAPINRTALIMEDKSIDLSRLKRYLGGVPEQ 64 +AK+ +P VTL ++K+A FE +P NRT L+ +++ ID++RL +LG Q Sbjct: 9 QAKEETPLPVRDVTLDEVKRATHDFELALPKGTNRTILLDQEQRIDMARLAPHLGVRSTQ 68 Query: 65 KFYMSRETFEIFEESDKLVPYYLDLVQSAVDNYISDTGKLPLVEDAWLPEVHYRLLATER 124 FYMSRETF I E D+ Y +D VQ AVD Y KLPL + +V L + Sbjct: 69 VFYMSRETFAIMEAKDRATVYEMDHVQVAVDRYFDKERKLPLKPYSKTFQVDCAKLFEQG 128 Query: 125 YLKETPPFPLYITEEEMMLTHRPE 148 YL+E P Y+ +E M+++ P+ Sbjct: 129 YLRELPHHTYYLVDESMIVSLEPK 152 >A8VRP3.1 A8VRP3_9BACI Putative uncharacterized protein Length = 144 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 14/147 (9%) Query: 1 MIFKRAKKNSPTVP---------LTVTLPQIKQAVRQFEEDMPAPINRTALIMEDKSIDL 51 M F++ K+ S T +TVT+ +++AV +F E I +I + ID Sbjct: 1 MGFRKRKQTSATDSEEPKRQFETVTVTIEDVRRAVNRFAERSSEEIPLRTIIHTNNEIDF 60 Query: 52 SRLKRYLGGVPEQKFYMSRETFEIFEESDKLVPYYLDLVQSAVDNYISDTGKLPLVEDAW 111 L LGG+P+Q FYMSRET+E+FEE++ +P Y+D Q AVD Y+ +TG P++ Sbjct: 61 ELLADDLGGLPDQPFYMSRETYEVFEEAE--LPGYIDRCQIAVDQYVLETGSEPVIPGDP 118 Query: 112 LPEVHYRLLATERYLKETPPF-PLYIT 137 +V+++ L + YL E P F PL+ + Sbjct: 119 SRKVNFQKL--KHYLSEPPSFCPLFAS 143 >A7GNX6.1 A7GNX6_BACCN Putative uncharacterized protein Length = 149 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 16/151 (10%) Query: 3 FKRAKKNSPTVPLTVTLPQIKQAVRQFEEDMPAPINRTALIMEDKSIDLSRLKRYLGGVP 62 FK K+ P +T +++QA+ +F E I T L+ +D +++ LK YL P Sbjct: 5 FKSGKEERP-----ITKDELEQAMAKFLE-TNTNIVYTVLVNDDYTVNYDLLKPYLQAFP 58 Query: 63 EQKFYMSRETFEIFEESDKLVPYY--LDLVQSAVDNYISDTGKLPLVEDAWLPEVHYRLL 120 KF +++ET E+FE +D+ + +DLVQ AVD Y+++ P+VED RL+ Sbjct: 59 TNKFLITKETLEVFEHTDENLELVKEIDLVQKAVDQYVTEKETFPIVEDN-----EDRLI 113 Query: 121 ATER---YLKETPPFPLYITEEEMMLTHRPE 148 + YL LYI+E+ +++ +P+ Sbjct: 114 CGIKLAPYLNRILKRDLYISEKHYLVSSKPD 144 >C3B2M4.1 C3B2M4_BACMY Putative uncharacterized protein Length = 151 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 13/139 (9%) Query: 16 TVTLPQIKQAVRQFEEDMPAPINRTALIMEDKSIDLSRLKRYLGGVPEQKFYMSRETFEI 75 ++T +++QA+ +F E + A I T L+ ED +++ LK YL P F +++ET E+ Sbjct: 13 SITKDELEQAMAKFLE-INANIVYTVLVNEDYTVNYDLLKPYLPAFPTNTFIITKETLEV 71 Query: 76 FEESD---KLVPYYLDLVQSAVDNYISDTGKLPLVEDAWLPEVHYRLLATER---YLKET 129 FE ++ KLV +DLVQ AVD Y+++ P+VED RL+ + YL Sbjct: 72 FEHTEENLKLVK-EIDLVQKAVDQYVTEKEMFPIVEDD-----EDRLICGMKLAPYLDRI 125 Query: 130 PPFPLYITEEEMMLTHRPE 148 LYI+E+ +++ +P+ Sbjct: 126 LKRKLYISEKHYLVSSQPD 144 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 919,099,815 Number of extensions: 36255933 Number of successful extensions: 96156 Number of sequences better than 1.0e-05: 77 Number of HSP's gapped: 96080 Number of HSP's successfully gapped: 77 Length of query: 152 Length of database: 3,060,696,203 Length adjustment: 114 Effective length of query: 38 Effective length of database: 1,986,700,493 Effective search space: 75494618734 Effective search space used: 75494618734 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)