BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0450.0008.p
         (117 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIQ0.1 B3KIQ0_9BACI Putative uncharacterized protein                 79   1e-13

>B3KIQ0.1 B3KIQ0_9BACI Putative uncharacterized protein
          Length = 79

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 43/51 (84%)

Query: 2  LITFQNKIVPVYFTTENKQPTQKVLRLLNNTLELKIQKGKSALQKCLNSLI 52
          LI FQNK VPVYFTT++KQP QKVL+LL + L+ KIQ GK ALQKCLNSLI
Sbjct: 4  LIMFQNKPVPVYFTTDSKQPVQKVLKLLTSALDHKIQTGKKALQKCLNSLI 54


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.134    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 371,936,979
Number of extensions: 21423577
Number of successful extensions: 16998
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 16999
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 3,060,696,203
Length adjustment: 84
Effective length of query: 33
Effective length of database: 2,269,330,943
Effective search space: 74887921119
Effective search space used: 74887921119
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)