BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0450.0007.p
         (184 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIQ3.1 B3KIQ3_9BACI Putative uncharacterized protein                 73   1e-11

>B3KIQ3.1 B3KIQ3_9BACI Putative uncharacterized protein
          Length = 268

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%)

Query: 42  IKRASFYLLNCFQLTYSTLSDSPALLMSRRKYEELREQADAYTLYVLTERLTAETGDVVN 101
           I++    L+    L+     D PALL+SR+++ ++      +    + +RL   T D   
Sbjct: 134 IEQTCDQLVQDLALSDQNWGDIPALLLSRKEFGDIYTSVTEHNCDDIGDRLARLTDDAEG 193

Query: 102 SPQLASVMKSPTAEGELKLCSMHEGTWYFQRALYMENNSGGWLVRVSGKPAEDWMIAVPL 161
           S  LA  MK+  + GEL+L   +  +W  Q A ++ N S  WL+R+S +  +DW+ A P 
Sbjct: 194 SIALAKCMKNKVSSGELQLSIWNGISWESQNAAFIVNESMNWLLRMSLEGDQDWLTAAPA 253

Query: 162 TRPQLCSIFYRWLLQ 176
           T+ Q   +   WL Q
Sbjct: 254 TKEQFRHMLLMWLKQ 268


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,113,767,414
Number of extensions: 43582998
Number of successful extensions: 86867
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 86867
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 3,060,696,203
Length adjustment: 127
Effective length of query: 57
Effective length of database: 1,864,227,298
Effective search space: 106260955986
Effective search space used: 106260955986
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)