BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0450.0003.p (371 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6T8.1 B3K6T8_9BACI Putative uncharacterized protein 382 e-104 B1DG14.1 B1DG14_9BACL Putative uncharacterized protein 228 1e-57 B4BLF5.1 B4BLF5_9BACI Putative uncharacterized protein 179 3e-43 C5D440.1 C5D440_9BACI Putative uncharacterized protein 178 7e-43 C3J7H4.1 C3J7H4_9BACI Putative uncharacterized protein 177 2e-42 >B3K6T8.1 B3K6T8_9BACI Putative uncharacterized protein Length = 326 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/321 (57%), Positives = 232/321 (72%) Query: 41 MGFRVIKTXXXXXXXXXXXXXVGIPNAQSAGLLAILGVETTRKRSLRTITARFLASLVXX 100 MGFRVIKT + IP A SAGLLAILGV+ TRKRS+R+I++RF ASL+ Sbjct: 1 MGFRVIKTAAASLLAILITDALNIPGATSAGLLAILGVDVTRKRSVRSISSRFFASLLGL 60 Query: 101 XXXXXXXXXXXXHYWVLGLYVLVGFPMIVKSGYKEGIVTSSVIVFRVFGQAELSVHVLLQ 160 HYWVL LY+L+ FP I ++ +KEGIVTSSV+VFRVF E+ + +LL Sbjct: 61 ILACILFYFLGFHYWVLALYILLAFPAISRANFKEGIVTSSVVVFRVFQGEEIGLGILLT 120 Query: 161 QIELLFIGLGSAGLVNLIYMPQTGGVIAGIRKEVDGYFSVIFTQMARTLRDPGYLWDGKE 220 QIELL IGLGSA LVNL+YMP + G + IR++VDG FSVIF + TLR+P ++WDGKE Sbjct: 121 QIELLIIGLGSAMLVNLVYMPNSEGAMMEIRRKVDGLFSVIFHHFSLTLRNPEHIWDGKE 180 Query: 221 LIGAGEAVQRGLTAASREMENHVIHPDEAWNVYFYMRKEQLESIQNMMQLLSQVYRQLPH 280 LI A +++G+ A R EN +IHPD +WN+YFYMRKEQ+E+IQ+MM +SQVY +LPH Sbjct: 181 LIEANRQIEKGIEEAKRASENQMIHPDGSWNIYFYMRKEQMENIQSMMHQISQVYERLPH 240 Query: 281 GDMVADLFDQLSNDVLAEEYTGRTEKLLEGLEKEFQGMELPETREEFEVRSAILQLCREL 340 G + A++FDQLS DV+AE YTG++E LL LE F+ MELP TREEFEVRSAILQLC EL Sbjct: 241 GVLTAEIFDQLSQDVVAEGYTGKSEGLLIELEDRFKEMELPTTREEFEVRSAILQLCHEL 300 Query: 341 SLYLNIAKRYKMPVDIKPVKR 361 YLNI+K+YK P KP KR Sbjct: 301 EYYLNISKKYKAPTAKKPQKR 321 >B1DG14.1 B1DG14_9BACL Putative uncharacterized protein Length = 322 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 122/311 (39%), Positives = 187/311 (60%) Query: 41 MGFRVIKTXXXXXXXXXXXXXVGIPNAQSAGLLAILGVETTRKRSLRTITARFLASLVXX 100 MG R+IKT + + AG+LAILGVE +R + L++ RF+AS + Sbjct: 1 MGIRIIKTALAAIIAIYSAVYLNLEPPLGAGILAILGVEVSRMKGLKSAIQRFVASSLGL 60 Query: 101 XXXXXXXXXXXXHYWVLGLYVLVGFPMIVKSGYKEGIVTSSVIVFRVFGQAELSVHVLLQ 160 H WV+ L++L+ FP++ + K+GIVTS+VIVF++F E++V VL Sbjct: 61 FFASLVFTIFGFHIWVVALFILMTFPVLARFQLKDGIVTSAVIVFQLFNHGEVTVDVLEN 120 Query: 161 QIELLFIGLGSAGLVNLIYMPQTGGVIAGIRKEVDGYFSVIFTQMARTLRDPGYLWDGKE 220 ++ L+ GLG A ++N IYMP+ ++ ++ V+ F IFT+M RTLR+P ++W+G E Sbjct: 121 EVLLMICGLGWATVINFIYMPKDQHLLESLKASVEKLFGDIFTEMGRTLREPSHIWNGSE 180 Query: 221 LIGAGEAVQRGLTAASREMENHVIHPDEAWNVYFYMRKEQLESIQNMMQLLSQVYRQLPH 280 L+ + G A EN + + W+ YF MR+ QLES+Q M++ L+ +Y +LP Sbjct: 181 LLEVHRIIDEGARRAVLNKENRLFGQEHYWSTYFEMRRLQLESVQAMLEELALIYEKLPQ 240 Query: 281 GDMVADLFDQLSNDVLAEEYTGRTEKLLEGLEKEFQGMELPETREEFEVRSAILQLCREL 340 + +A+L + LS +V +E Y G TEK L L + ++ MELP TR+EFE+R+AIL++ EL Sbjct: 241 NEPLAELLELLSGEVKSEVYRGITEKRLSELRQLYKSMELPRTRDEFELRAAILKMTMEL 300 Query: 341 SLYLNIAKRYK 351 YL IAKR K Sbjct: 301 ERYLAIAKRLK 311 >B4BLF5.1 B4BLF5_9BACI Putative uncharacterized protein Length = 327 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 106/324 (32%), Positives = 172/324 (53%), Gaps = 1/324 (0%) Query: 41 MGFRVIKTXXXXXXXXXXXXXVGIPNAQSAGLLAILGVETTRKRSLRTITARFLASLVXX 100 +G+R +KT +G+ N SAG++ IL V+ T+KRSL ARF A +V Sbjct: 3 IGYRTLKTAVGAALAIAIAQLIGLHNFASAGIIVILCVQVTKKRSLEAARARFTACVVAI 62 Query: 101 XXXXXXXXXXXXHYWVLGLYVLVGFPMIVKSGYKEGIVTSSVIVFRVFGQAELSVHVLLQ 160 H W +GL +L+ P+ V+ EGI TSSVI+ ++ EL+ +++ Sbjct: 63 GFAALFFTVFGYHPWTIGLLLLLFIPVTVRLKVNEGIATSSVIILHLYAAKELTWALIVN 122 Query: 161 QIELLFIGLGSAGLVNLIYMPQTGGVIAGIRKEVDGYFSVIFTQMARTLRDPGYLWDGKE 220 ++ L+ +G+G A LVN+ YMP + R+ V+ F +I ++ R LR WDGKE Sbjct: 123 ELLLVIVGIGVALLVNM-YMPSAEKQLKEYRRIVEDLFRIILKEVVRYLRTNELDWDGKE 181 Query: 221 LIGAGEAVQRGLTAASREMENHVIHPDEAWNVYFYMRKEQLESIQNMMQLLSQVYRQLPH 280 L + +++ A R +N + ++ + YF MR+ QLE I+ M+ L++ + + Sbjct: 182 LPLTADMLEQAKKLAIRHADNQLWRNEDEYVRYFRMRERQLEIIERMLPLVTSLTYTVEQ 241 Query: 281 GDMVADLFDQLSNDVLAEEYTGRTEKLLEGLEKEFQGMELPETREEFEVRSAILQLCREL 340 MVAD D+LS+ + R + L + +EF+ M LP+TRE+FE R+A+ L REL Sbjct: 242 RIMVADFIDELSDAIHPGNTADRFLRRLAAMREEFKEMPLPKTREQFEERAALFHLVREL 301 Query: 341 SLYLNIAKRYKMPVDIKPVKRPLP 364 YL I ++ + + +R LP Sbjct: 302 EQYLIIKSQFHPGNEAEKRRRLLP 325 >C5D440.1 C5D440_9BACI Putative uncharacterized protein Length = 325 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 170/312 (54%), Gaps = 1/312 (0%) Query: 41 MGFRVIKTXXXXXXXXXXXXXVGIPNAQSAGLLAILGVETTRKRSLRTITARFLASLVXX 100 +G+R KT G+ N SAG++ IL V+ T+KRSL+ ARF+A +V Sbjct: 4 IGYRTAKTAIGTALSIFIAQLAGLNNFASAGIITILCVQVTKKRSLKAAWARFVACVVAM 63 Query: 101 XXXXXXXXXXXXHYWVLGLYVLVGFPMIVKSGYKEGIVTSSVIVFRVFGQAELSVHVLLQ 160 + + +GL +L P V EGI TSSVI+ ++ + + ++ Sbjct: 64 LFSYIFFQGIGYYPFTVGLMLLFFIPTTVWLKVNEGIATSSVIILHLYAARKFTWEIICN 123 Query: 161 QIELLFIGLGSAGLVNLIYMPQTGGVIAGIRKEVDGYFSVIFTQMARTLRDPGYLWDGKE 220 ++ L+ IG+ A L+N+ YMP + ++ V+ F +I ++ R LR WDGKE Sbjct: 124 ELLLILIGISVALLMNM-YMPSAEKQLKEYQRIVEDLFRIILKEIVRYLRTNEIDWDGKE 182 Query: 221 LIGAGEAVQRGLTAASREMENHVIHPDEAWNVYFYMRKEQLESIQNMMQLLSQVYRQLPH 280 L AG+ +Q+ A R +ENH++ +E + YF MR++QLE I+ ++ L++ + + Sbjct: 183 LTLAGDILQKAKLLAIRNVENHMLRNEEGYYHYFLMREKQLEIIERVLPLVTSLTYTVEQ 242 Query: 281 GDMVADLFDQLSNDVLAEEYTGRTEKLLEGLEKEFQGMELPETREEFEVRSAILQLCREL 340 ++VAD D+LS+ V R + L ++K F+ M LP+TREEFE R+A+L L +EL Sbjct: 243 RNIVADFIDKLSDAVHPGNTADRFLRELHHMKKRFETMPLPKTREEFEERAALLHLVKEL 302 Query: 341 SLYLNIAKRYKM 352 YL I ++++ Sbjct: 303 EQYLIIKSQFRV 314 >C3J7H4.1 C3J7H4_9BACI Putative uncharacterized protein Length = 324 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/318 (32%), Positives = 169/318 (53%), Gaps = 1/318 (0%) Query: 41 MGFRVIKTXXXXXXXXXXXXXVGIPNAQSAGLLAILGVETTRKRSLRTITARFLASLVXX 100 +G+R +KT +G+ N SAG++ IL V+ T+KRSL T ARF A +V Sbjct: 3 IGYRTLKTAVGAALAIAIAQLIGLHNFASAGIIVILCVQVTKKRSLETARARFAACVVAI 62 Query: 101 XXXXXXXXXXXXHYWVLGLYVLVGFPMIVKSGYKEGIVTSSVIVFRVFGQAELSVHVLLQ 160 H W +GL +L+ P+ V+ EGI TSSVI+ ++ E++ ++ Sbjct: 63 GFAALFFAVFGYHPWTIGLLLLLFIPVTVRLKVNEGIATSSVIILHLYAAKEITWGLVAN 122 Query: 161 QIELLFIGLGSAGLVNLIYMPQTGGVIAGIRKEVDGYFSVIFTQMARTLRDPGYLWDGKE 220 +I L+ +G+G A L+N+ YMP + ++ V+ F +I ++ R LR WDGKE Sbjct: 123 EILLVAVGIGVALLMNM-YMPSVEKQLKEYQRIVEDLFRIILKEIVRYLRTNELDWDGKE 181 Query: 221 LIGAGEAVQRGLTAASREMENHVIHPDEAWNVYFYMRKEQLESIQNMMQLLSQVYRQLPH 280 L A E + + A R +N + ++ + YF MR+ QLE I++M+ L++ + + Sbjct: 182 LPLAAETLDKAKKLAMRHADNQLWRNEDEYVRYFRMRERQLEIIEHMLPLVTSLTYTVEQ 241 Query: 281 GDMVADLFDQLSNDVLAEEYTGRTEKLLEGLEKEFQGMELPETREEFEVRSAILQLCREL 340 M+AD D+LS+ + R + L + ++F+ M LP+TRE+FE R+A+ L REL Sbjct: 242 RMMIADFIDELSDAIHPGNTADRFLRRLAEMREQFKAMPLPKTREQFEERAALFHLVREL 301 Query: 341 SLYLNIAKRYKMPVDIKP 358 YL I + + KP Sbjct: 302 ERYLIIKSEFHPGNERKP 319 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,993,717,072 Number of extensions: 76506026 Number of successful extensions: 191293 Number of sequences better than 1.0e-05: 235 Number of HSP's gapped: 190849 Number of HSP's successfully gapped: 235 Length of query: 371 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 234 Effective length of database: 1,770,017,148 Effective search space: 414184012632 Effective search space used: 414184012632 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)