BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0449.0003.p (294 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5G7.1 B3K5G7_9BACI ABC transporter related 424 e-117 A3I5R6.1 A3I5R6_9BACI Iron(III) dicitrate ABC transporter, ATP-b... 402 e-110 B1HRI6.1 B1HRI6_LYSSC Achromobactin transport ATP-binding protein 400 e-110 A8FH86.1 A8FH86_BACP2 Ferric siderophore ABC superfamily ATP bin... 388 e-106 B4AG78.1 B4AG78_BACPU Ferrichrome transport ATP-binding protein ... 388 e-106 >B3K5G7.1 B3K5G7_9BACI ABC transporter related Length = 266 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/263 (77%), Positives = 227/263 (86%) Query: 11 LATLEARGLTVSYGSKTVIQNMNVQIPKGRITVLIGGNGCGKSTLLRTLARLLKPGGGEV 70 + TL+ + LTV YG KTVI++MN+ IP+G+ITV IGGNGCGKSTLLRTLARL KP G V Sbjct: 1 MTTLQVKELTVGYGPKTVIKDMNLMIPEGKITVFIGGNGCGKSTLLRTLARLQKPDTGAV 60 Query: 71 LLDGGRIARLSTREVAKAMAILPQGPTAPEGLTVRQLVRQGRYPHQGWLKAWSEEDEAMV 130 LLDG +IA++ST+EVAK+++ILPQGP+APEGLTVRQLVRQGRYPHQ WLK WS DE MV Sbjct: 61 LLDGRQIAQMSTKEVAKSLSILPQGPSAPEGLTVRQLVRQGRYPHQSWLKQWSPVDEEMV 120 Query: 131 RSALEAAQVADLADHTVDSLSGGQRQRVWIAMSLAQGTDLLLLDEPTTYLDLSHQVEILD 190 AL++ +V AD TVDSLSGGQRQR WIAM+LAQGT +LLLDEPTTYLDLSHQVEILD Sbjct: 121 NVALKSTRVEAFADQTVDSLSGGQRQRAWIAMTLAQGTGMLLLDEPTTYLDLSHQVEILD 180 Query: 191 MLYELNERQGRTIVMVLHDLNLACRYAHHMVAVHAGNIYAEGAPESIITPETVKAVFQLD 250 MLYELNER RTIVMVLHDLNLACRYAH+MVAV GNIYA GAPE I+TPETVK VFQLD Sbjct: 181 MLYELNERDQRTIVMVLHDLNLACRYAHYMVAVSEGNIYAFGAPEEIVTPETVKDVFQLD 240 Query: 251 CEVIRDPLFGTPLCIPHGKGRRI 273 C+VI DPLFGTPLCIP GKGR I Sbjct: 241 CKVIPDPLFGTPLCIPRGKGRII 263 >A3I5R6.1 A3I5R6_9BACI Iron(III) dicitrate ABC transporter, ATP-binding protein Length = 283 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 177/265 (66%), Positives = 221/265 (83%) Query: 14 LEARGLTVSYGSKTVIQNMNVQIPKGRITVLIGGNGCGKSTLLRTLARLLKPGGGEVLLD 73 LE + L VSYG +++++N+QIPKG+ITVL+G NGCGKSTLLRT ARL KP GE+ L+ Sbjct: 13 LEVQNLDVSYGENLILEDLNLQIPKGKITVLVGANGCGKSTLLRTFARLQKPKSGEIFLE 72 Query: 74 GGRIARLSTREVAKAMAILPQGPTAPEGLTVRQLVRQGRYPHQGWLKAWSEEDEAMVRSA 133 + +ST+EVAK +AILPQGP APEGLTV+QL++QGRYPHQ WLK WS EDE +V +A Sbjct: 73 DHPLDAISTKEVAKRLAILPQGPVAPEGLTVQQLIKQGRYPHQSWLKQWSTEDENIVNNA 132 Query: 134 LEAAQVADLADHTVDSLSGGQRQRVWIAMSLAQGTDLLLLDEPTTYLDLSHQVEILDMLY 193 LE Q+ + AD VD+LSGGQRQRVWIAM+LAQ TDL+LLDEPTTYLD++HQVEILD+L+ Sbjct: 133 LEVTQMTEFADRPVDALSGGQRQRVWIAMTLAQKTDLILLDEPTTYLDMAHQVEILDLLF 192 Query: 194 ELNERQGRTIVMVLHDLNLACRYAHHMVAVHAGNIYAEGAPESIITPETVKAVFQLDCEV 253 +LNE +GRT+VMVLHDLNLACRYAHH+VAV +YA+G PE ++TPE V+AVF++DC + Sbjct: 193 DLNENEGRTVVMVLHDLNLACRYAHHIVAVQNKQVYAQGKPEEVVTPEMVQAVFRMDCTI 252 Query: 254 IRDPLFGTPLCIPHGKGRRIAAEAV 278 +RDPLFGTPLC+PHGKGR + EA Sbjct: 253 MRDPLFGTPLCVPHGKGRTVQMEAF 277 >B1HRI6.1 B1HRI6_LYSSC Achromobactin transport ATP-binding protein Length = 283 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 177/265 (66%), Positives = 221/265 (83%) Query: 14 LEARGLTVSYGSKTVIQNMNVQIPKGRITVLIGGNGCGKSTLLRTLARLLKPGGGEVLLD 73 LE + L VSYG +++++N+QIPKG+ITVL+G NGCGKSTLLRT ARL KP GE+ L+ Sbjct: 13 LEVQNLDVSYGENLILEDLNLQIPKGKITVLVGANGCGKSTLLRTFARLQKPRSGEIFLE 72 Query: 74 GGRIARLSTREVAKAMAILPQGPTAPEGLTVRQLVRQGRYPHQGWLKAWSEEDEAMVRSA 133 + +ST+EVAK +AILPQGP APEGLTV+QL++QGRYPHQ WLK WS EDE +V +A Sbjct: 73 NHPLDAISTKEVAKRLAILPQGPVAPEGLTVQQLIKQGRYPHQSWLKQWSTEDETIVNNA 132 Query: 134 LEAAQVADLADHTVDSLSGGQRQRVWIAMSLAQGTDLLLLDEPTTYLDLSHQVEILDMLY 193 LE Q+ + AD VD+LSGGQRQRVWIAM+LAQ TDL+LLDEPTTYLD++HQVEILD+L+ Sbjct: 133 LEVTQMTEFADRPVDALSGGQRQRVWIAMTLAQKTDLILLDEPTTYLDMAHQVEILDLLF 192 Query: 194 ELNERQGRTIVMVLHDLNLACRYAHHMVAVHAGNIYAEGAPESIITPETVKAVFQLDCEV 253 +LNE +GRT+VMVLHDLNLACRYAHH+VAV +YA+G PE ++TPE V+AVF++DC + Sbjct: 193 DLNEHEGRTVVMVLHDLNLACRYAHHIVAVRNKRVYAQGKPEEVVTPEMVQAVFRMDCTI 252 Query: 254 IRDPLFGTPLCIPHGKGRRIAAEAV 278 +RDPLFGTPLC+PHGKGR + EA Sbjct: 253 MRDPLFGTPLCVPHGKGRTVQMEAF 277 >A8FH86.1 A8FH86_BACP2 Ferric siderophore ABC superfamily ATP binding cassette transporter, ABC protein Length = 276 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 176/267 (65%), Positives = 218/267 (81%) Query: 11 LATLEARGLTVSYGSKTVIQNMNVQIPKGRITVLIGGNGCGKSTLLRTLARLLKPGGGEV 70 ++ + GL++ YG +I +NV IPKG ITV IG NGCGKSTLLR+LARL+KP GG V Sbjct: 1 MSAISTEGLSLGYGETMIIDELNVSIPKGEITVFIGSNGCGKSTLLRSLARLMKPMGGSV 60 Query: 71 LLDGGRIARLSTREVAKAMAILPQGPTAPEGLTVRQLVRQGRYPHQGWLKAWSEEDEAMV 130 LL+G IA+L T+EVAK +AILPQGP APEGLTV QLV+QGRYP+Q WLK WS++DE V Sbjct: 61 LLEGHSIAKLPTKEVAKQLAILPQGPEAPEGLTVHQLVKQGRYPYQNWLKQWSKQDEEAV 120 Query: 131 RSALEAAQVADLADHTVDSLSGGQRQRVWIAMSLAQGTDLLLLDEPTTYLDLSHQVEILD 190 AL++ ++ DLAD TVDSLSGGQRQR WIAM+LAQ TD++LLDEPTTYLD++HQ+EILD Sbjct: 121 NRALKSTKMEDLADRTVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEILD 180 Query: 191 MLYELNERQGRTIVMVLHDLNLACRYAHHMVAVHAGNIYAEGAPESIITPETVKAVFQLD 250 +L++LNE++ RTIVMVLHDLNLACRYAHH+VA+ IYAEG PE++I + VK VF ++ Sbjct: 181 LLFDLNEKEQRTIVMVLHDLNLACRYAHHLVAIKDKTIYAEGRPETVINCDLVKNVFDMN 240 Query: 251 CEVIRDPLFGTPLCIPHGKGRRIAAEA 277 C+V DPLFGTPLCIPHG+GR I +A Sbjct: 241 CQVTTDPLFGTPLCIPHGRGRCIVQQA 267 >B4AG78.1 B4AG78_BACPU Ferrichrome transport ATP-binding protein FhuC Length = 276 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 176/267 (65%), Positives = 218/267 (81%) Query: 11 LATLEARGLTVSYGSKTVIQNMNVQIPKGRITVLIGGNGCGKSTLLRTLARLLKPGGGEV 70 ++ + GL++ YG +I +NV IPKG ITV IG NGCGKSTLLR+LARL+KP GG V Sbjct: 1 MSAISTEGLSLGYGETMIIDELNVSIPKGEITVFIGSNGCGKSTLLRSLARLMKPMGGSV 60 Query: 71 LLDGGRIARLSTREVAKAMAILPQGPTAPEGLTVRQLVRQGRYPHQGWLKAWSEEDEAMV 130 LL+G IA+L T+EVAK +AILPQGP APEGLTV QLV+QGRYP+Q WLK WS++DE V Sbjct: 61 LLEGHSIAKLPTKEVAKQLAILPQGPEAPEGLTVHQLVKQGRYPYQNWLKQWSKQDEEAV 120 Query: 131 RSALEAAQVADLADHTVDSLSGGQRQRVWIAMSLAQGTDLLLLDEPTTYLDLSHQVEILD 190 AL++ ++ DLAD TVDSLSGGQRQR WIAM+LAQ TD++LLDEPTTYLD++HQ+EILD Sbjct: 121 NRALKSTKMEDLADRTVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEILD 180 Query: 191 MLYELNERQGRTIVMVLHDLNLACRYAHHMVAVHAGNIYAEGAPESIITPETVKAVFQLD 250 +L++LNE++ RTIVMVLHDLNLACRYAHH+VA+ IYAEG PE++I + VK VF ++ Sbjct: 181 LLFDLNEKEQRTIVMVLHDLNLACRYAHHLVAIKDKTIYAEGRPETVINCDLVKNVFDMN 240 Query: 251 CEVIRDPLFGTPLCIPHGKGRRIAAEA 277 C+V DPLFGTPLCIPHG+GR I +A Sbjct: 241 CQVTTDPLFGTPLCIPHGRGRCIVQQA 267 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,767,052,628 Number of extensions: 73459211 Number of successful extensions: 541543 Number of sequences better than 1.0e-05: 92876 Number of HSP's gapped: 447133 Number of HSP's successfully gapped: 99731 Length of query: 294 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 160 Effective length of database: 1,798,280,193 Effective search space: 287724830880 Effective search space used: 287724830880 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)