BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0444.0027.p (248 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DD16.1 B1DD16_9BACL Methionine aminopeptidase EC=3.4.11.18 412 e-114 C0ZGZ7.1 C0ZGZ7_BREBN Methionine aminopeptidase EC=3.4.11.18 394 e-108 B3KDS0.1 B3KDS0_9BACI Methionine aminopeptidase EC=3.4.11.18 390 e-107 Q2BB51.1 Q2BB51_9BACI Methionine aminopeptidase EC=3.4.11.18 381 e-104 C1PDK5.1 C1PDK5_BACCO Methionine aminopeptidase, type I 374 e-102 >B1DD16.1 B1DD16_9BACL Methionine aminopeptidase EC=3.4.11.18 Length = 248 Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust. Identities = 193/247 (78%), Positives = 217/247 (87%) Query: 1 MIIMKTMEEIEKMRAAGKILAECHRQIAQMIKPGITTWEIDQFAEKFILSQGATPEQKGY 60 MII+KT EI +M AGKILAE HRQIA++I PGITT EIDQFAEK + GATPEQKGY Sbjct: 1 MIIIKTEAEINRMHEAGKILAEIHRQIAKLIAPGITTHEIDQFAEKLMKQYGATPEQKGY 60 Query: 61 HGYPYATCASVNDVICHGFPKREELKDGDIVTIDMVVNLNGWLADSAWSYAVGNISEQAE 120 GY YATCAS+NDVICHGFPK+E+LKDGDIVTIDMVVNLNGWLADSAWSY VGN++E+A+ Sbjct: 61 KGYQYATCASINDVICHGFPKKEKLKDGDIVTIDMVVNLNGWLADSAWSYPVGNVTEEAD 120 Query: 121 KLLNTTKESLFKGIEQAVAGNRIGDVAHAVQVYAESNGFSVVRDFIGHGIGSEMHEAPEV 180 +LL TKESL+KGIE+AVAGNRIGDV+HA+Q YAE+ GFSVVRDFIGHGIG EMHE P+V Sbjct: 121 RLLRVTKESLYKGIEKAVAGNRIGDVSHAIQAYAEAEGFSVVRDFIGHGIGQEMHEDPQV 180 Query: 181 PHYGPAGKGPRIKEGMVFTIEPMLNTGSYRTKVDADGWTARTIDGGLSAQYEHTLAITPQ 240 PHYGP KGPRIKEGMVFTIEPMLN G+Y+ K+DADGWTART DG LSAQYEHT+AIT Sbjct: 181 PHYGPPNKGPRIKEGMVFTIEPMLNVGTYQMKIDADGWTARTRDGKLSAQYEHTIAITAN 240 Query: 241 GTIILTE 247 G +ILTE Sbjct: 241 GPVILTE 247 >C0ZGZ7.1 C0ZGZ7_BREBN Methionine aminopeptidase EC=3.4.11.18 Length = 248 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 180/247 (72%), Positives = 210/247 (85%) Query: 1 MIIMKTMEEIEKMRAAGKILAECHRQIAQMIKPGITTWEIDQFAEKFILSQGATPEQKGY 60 MII+KT EEIE M AAGK+LA CHR+IA+MI+PGI+TWEIDQF E+F+ GATPEQKG+ Sbjct: 1 MIILKTPEEIELMHAAGKVLAACHREIAKMIRPGISTWEIDQFVEEFLAKNGATPEQKGF 60 Query: 61 HGYPYATCASVNDVICHGFPKREELKDGDIVTIDMVVNLNGWLADSAWSYAVGNISEQAE 120 HGYPYATC SVNDVICHGFPK+E L+DGDIVTIDMVV NGWLADSAWSY VG +S +A+ Sbjct: 61 HGYPYATCGSVNDVICHGFPKKEPLRDGDIVTIDMVVRKNGWLADSAWSYEVGTVSPEAK 120 Query: 121 KLLNTTKESLFKGIEQAVAGNRIGDVAHAVQVYAESNGFSVVRDFIGHGIGSEMHEAPEV 180 +LL T++SL+ GIEQAV GNRIGD++HA+Q YA+ G+SVVRDF GHGIG EMHE P V Sbjct: 121 RLLEVTEKSLYLGIEQAVVGNRIGDISHAIQTYAQEQGYSVVRDFTGHGIGQEMHEEPFV 180 Query: 181 PHYGPAGKGPRIKEGMVFTIEPMLNTGSYRTKVDADGWTARTIDGGLSAQYEHTLAITPQ 240 PH+GP G+G R+KEGMV TIEPMLN G+Y +KVD DGWTART DG LSAQYEHTLAIT Sbjct: 181 PHFGPPGRGQRLKEGMVITIEPMLNIGTYHSKVDEDGWTARTRDGKLSAQYEHTLAITAN 240 Query: 241 GTIILTE 247 G +ILT+ Sbjct: 241 GPVILTK 247 >B3KDS0.1 B3KDS0_9BACI Methionine aminopeptidase EC=3.4.11.18 Length = 248 Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/247 (72%), Positives = 207/247 (83%) Query: 1 MIIMKTMEEIEKMRAAGKILAECHRQIAQMIKPGITTWEIDQFAEKFILSQGATPEQKGY 60 MII+KT E+I KM AG ILAECHRQIA MIKPG+TT EIDQF E+F+ +GATPEQKGY Sbjct: 1 MIILKTQEQIAKMNKAGDILAECHRQIANMIKPGVTTLEIDQFVERFLAERGATPEQKGY 60 Query: 61 HGYPYATCASVNDVICHGFPKREELKDGDIVTIDMVVNLNGWLADSAWSYAVGNISEQAE 120 HGYP+ATCASVNDVICHGFP E LKDGDIVTIDMVV +GWLADSAWSY VGN+SE+A+ Sbjct: 61 HGYPFATCASVNDVICHGFPSHEPLKDGDIVTIDMVVKYDGWLADSAWSYPVGNVSEEAQ 120 Query: 121 KLLNTTKESLFKGIEQAVAGNRIGDVAHAVQVYAESNGFSVVRDFIGHGIGSEMHEAPEV 180 LL+ TK++L+ GIEQAV GNRIGD++HA+Q YAE+ SVVR F+GH IG MHE P+V Sbjct: 121 HLLDVTKKALYLGIEQAVIGNRIGDISHAIQSYAEAQNLSVVRHFVGHAIGENMHEEPQV 180 Query: 181 PHYGPAGKGPRIKEGMVFTIEPMLNTGSYRTKVDADGWTARTIDGGLSAQYEHTLAITPQ 240 PHYGP +G R+KEGMV TIEPMLN G+Y+ K+D+DGWTART+DG SAQYEHTLAIT Sbjct: 181 PHYGPPNRGTRLKEGMVITIEPMLNLGTYQCKIDSDGWTARTVDGKWSAQYEHTLAITKD 240 Query: 241 GTIILTE 247 G +ILTE Sbjct: 241 GPVILTE 247 >Q2BB51.1 Q2BB51_9BACI Methionine aminopeptidase EC=3.4.11.18 Length = 249 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 174/247 (70%), Positives = 207/247 (83%) Query: 1 MIIMKTMEEIEKMRAAGKILAECHRQIAQMIKPGITTWEIDQFAEKFILSQGATPEQKGY 60 MI++K+ EIE M+ AG+ILA CH++IA+ IKPG+TTWEID+F E F+ ATPEQKGY Sbjct: 1 MIVLKSAREIEAMKKAGEILASCHKEIAKRIKPGVTTWEIDEFVEGFLKEHDATPEQKGY 60 Query: 61 HGYPYATCASVNDVICHGFPKREELKDGDIVTIDMVVNLNGWLADSAWSYAVGNISEQAE 120 GY YATCAS+ND ICHGFP+REELKDGDIVTIDMVV NG LADSAW+YAVGN+SE+ Sbjct: 61 KGYKYATCASINDEICHGFPRREELKDGDIVTIDMVVRYNGALADSAWTYAVGNLSEKHR 120 Query: 121 KLLNTTKESLFKGIEQAVAGNRIGDVAHAVQVYAESNGFSVVRDFIGHGIGSEMHEAPEV 180 KLL TKE+L+KGIEQAV G RIGD+ HA+Q Y E GFSVVR+FIGHGIG+ +HE P+V Sbjct: 121 KLLEVTKEALYKGIEQAVPGKRIGDIGHAIQTYVEGEGFSVVRNFIGHGIGNVIHEKPDV 180 Query: 181 PHYGPAGKGPRIKEGMVFTIEPMLNTGSYRTKVDADGWTARTIDGGLSAQYEHTLAITPQ 240 PH+G AGKGPRIKEGMVFTIEPM+N G Y TK+D +GWTART DG SAQYEHT+A+T + Sbjct: 181 PHFGLAGKGPRIKEGMVFTIEPMVNVGVYDTKMDNNGWTARTADGKFSAQYEHTIAVTKE 240 Query: 241 GTIILTE 247 GT+ILT+ Sbjct: 241 GTLILTD 247 >C1PDK5.1 C1PDK5_BACCO Methionine aminopeptidase, type I Length = 250 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 170/247 (68%), Positives = 207/247 (83%) Query: 1 MIIMKTMEEIEKMRAAGKILAECHRQIAQMIKPGITTWEIDQFAEKFILSQGATPEQKGY 60 MI +K+ EI+ M+ AGK+LA+ H++IA+MIKPGITTWEI++F ++++ GATPEQKGY Sbjct: 1 MITLKSQREIDMMKKAGKLLADTHKKIAKMIKPGITTWEIEEFVDRYLREHGATPEQKGY 60 Query: 61 HGYPYATCASVNDVICHGFPKREELKDGDIVTIDMVVNLNGWLADSAWSYAVGNISEQAE 120 GY YATCAS+ND ICHGFP++ LK+GDIVTIDMVVNLNG LADSAWSY VG +SEQ + Sbjct: 61 QGYQYATCASINDEICHGFPRKTPLKEGDIVTIDMVVNLNGALADSAWSYPVGKVSEQTQ 120 Query: 121 KLLNTTKESLFKGIEQAVAGNRIGDVAHAVQVYAESNGFSVVRDFIGHGIGSEMHEAPEV 180 KLL+ TKE+L+KGIEQA GNRIGD+ HA+Q Y E+ GFSVVR+FIGHGIG +HE PEV Sbjct: 121 KLLDVTKEALYKGIEQAKPGNRIGDIGHAIQTYVEAQGFSVVRNFIGHGIGPTIHEKPEV 180 Query: 181 PHYGPAGKGPRIKEGMVFTIEPMLNTGSYRTKVDADGWTARTIDGGLSAQYEHTLAITPQ 240 PHYG KGPRIKEGMV TIEPM+N GSY TK+D +GWTART+DG LSAQYEHT+AIT Sbjct: 181 PHYGLPHKGPRIKEGMVITIEPMVNIGSYETKMDDNGWTARTMDGSLSAQYEHTIAITKD 240 Query: 241 GTIILTE 247 G +I+T+ Sbjct: 241 GIVIITD 247 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,555,008,867 Number of extensions: 66387505 Number of successful extensions: 166019 Number of sequences better than 1.0e-05: 3944 Number of HSP's gapped: 160774 Number of HSP's successfully gapped: 3953 Length of query: 248 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 116 Effective length of database: 1,817,122,223 Effective search space: 210786177868 Effective search space used: 210786177868 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)