BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0444.0023.p (672 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6LR74.1 A6LR74_CLOB8 Methyl-accepting chemotaxis sensory transd... 445 e-123 B8G2H9.1 B8G2H9_DESHD Methyl-accepting chemotaxis sensory transd... 434 e-119 Q24VM2.1 Q24VM2_DESHY Putative uncharacterized protein 433 e-119 C4IHC4.1 C4IHC4_CLOBU Methyl-accepting chemotaxis sensory transd... 429 e-118 B1QWW2.1 B1QWW2_CLOBU Methyl-accepting chemotaxis protein signal... 429 e-118 >A6LR74.1 A6LR74_CLOB8 Methyl-accepting chemotaxis sensory transducer Length = 666 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 252/648 (38%), Positives = 369/648 (56%), Gaps = 2/648 (0%) Query: 20 PLAISGLISHNLASNALQQTIEEELRDTTASAAKAVDSELEAVESYLSIASKNDTLXXXX 79 P+ + G IS+ ++S ++Q ++++L++ T + + ++ +++ + L +AS N + Sbjct: 20 PMGLLGYISYRMSSASIQTAVQQQLKEQTYNTSNLINKTIDSTKHSLEVASLNGDIIKAV 79 Query: 80 XXXXXXXXXXXXHTYISGIQQDHAKLLESLIIAGTDGQVLLTSSPENPGLDVRDQDYFQQ 139 YI +Q+ + +E LII G+V++ + + +D+ D+DY +Q Sbjct: 80 ENSNTSNLDTASE-YIRAVQEKNKDFMEVLIITDAYGKVIVNTQSKENDIDLSDRDYMKQ 138 Query: 140 ALQ-GKEAVSEVLFSKESNQHVVAIARPLEHDGHITGVLIGTVVFNSLSSPVAEVKIGDS 198 L GKE VSEVL S+ + + IA PL+ +G + G L+G++ F+S+SS +++K+G S Sbjct: 139 VLSSGKEVVSEVLTSRFTGNPAIFIAYPLKENGKLIGTLVGSIKFDSISSYASQIKVGKS 198 Query: 199 GYGYMTDRTGLIVYHPDQGKILKETLDGNSNKELNALVQVMKSGKASDGFYTYEGVHKYM 258 GY YM D+TGLIVYHPD KILKE + N+ ++L LVQ MK GK+S+GFYTY ++KY+ Sbjct: 199 GYAYMIDKTGLIVYHPDSSKILKENANDNAGEDLKVLVQEMKEGKSSEGFYTYGNIYKYV 258 Query: 259 SFQPAGNWVVATTANVQDYMAPATEIRNTTXXXXXXXXXXXXXXXXXXTTRNIVHPIIKL 318 FQP GNWV+A TA +YM+ A IRN T +T I++PI KL Sbjct: 259 VFQPVGNWVIAVTAQYDEYMSAALSIRNYTIIISLISIIIAMICAYTYSTIGIINPIKKL 318 Query: 319 EQAMSRAGEGNLTVHTSIRSGDELQELSEAFNTMIDKQKAIIEKVRAGSVSLXXXXXXXX 378 E+ M AGEG+LTV I+S DE++EL ++FN MI Q I+ V + L Sbjct: 319 ERLMRSAGEGDLTVKIDIQSKDEIEELGKSFNEMIKHQDQIVRNVTNAAEQLNAASEEMA 378 Query: 379 XXXXXXXXXXXXXXXXXXXXXAGAEXXXXXXXXXXXXXXXXXXXXXXXXXKAAATSGNAD 438 AE +A ATS NA Sbjct: 379 ASSEEISAATEEISATVNQVAQDAEKQNESIVDVSKVLVQLSSLVQLAQSRAKATSSNAA 438 Query: 439 VTNQAAQRGRAQVMDTVQAMNTISSSTQETEEQLQAVSELSDQVSTIIGTIXXXXXXXXX 498 T AA GR +V +TV+AM+ IS ++ET + L+++S LS +V+ II I Sbjct: 439 NTMSAADLGREKVEETVKAMDIISKGSEETSQALESLSGLSSKVNGIINIINSIAEQTNL 498 Query: 499 XXXXXXXXXXXXGEHGRGFSVVAEEVRKLSDETHKQATEISALVSDMVSRITQAVDSMRG 558 GEHG+GFSVVA+EVRKLS+E++ +A EI+ LVS+MV + AV +M Sbjct: 499 LALNAAIEAARAGEHGKGFSVVADEVRKLSEESNDRAREIAVLVSEMVKQTQNAVIAMER 558 Query: 559 ATEAVEGGVRVVTETDHAFVHIINSVELITGSVKEILDITQDEVATSDQIIKLIDSMGSI 618 + V GV++V+ETD AFV IIN++E I V EILDIT DEVA+SD++I LI+ + ++ Sbjct: 559 SKSEVNNGVKIVSETDKAFVDIINAIENIVKHVTEILDITGDEVASSDKVIGLINDIATV 618 Query: 619 SELAAINSENVSSATEEQAATVTNFAASAQEVSAMANELEILVEKFII 666 +E A NSENVSSA EEQA+ + N A+AQE SAMA EL LVE+F I Sbjct: 619 TESNASNSENVSSAAEEQASAINNLTATAQETSAMAEELTKLVERFKI 666 >B8G2H9.1 B8G2H9_DESHD Methyl-accepting chemotaxis sensory transducer with Cache sensor Length = 695 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/645 (37%), Positives = 367/645 (56%), Gaps = 1/645 (0%) Query: 20 PLAISGLISHNLASNALQQTIEEELRDTTASAAKAVDSELEAVESYLSIASKNDTLXXXX 79 P+ + G +S+ +A+NALQ+TIE++L DTT A+A+ +++A + L++ + N+ L Sbjct: 45 PVVVLGFMSYTMAANALQETIEQQLSDTTKQTAEAISGDMKAARNILNVMATNENLAEVI 104 Query: 80 XXXXXXXXXXXXHTYISGIQQDHAKLLESLIIAGTDGQVLLTSSPENPGLDVRDQDYFQQ 139 TY+S +Q++++ L ESLI+ G+ ++ +S N D ++Y Q+ Sbjct: 105 LDQNNGELSSRVFTYLSTLQKENSDLFESLILTDAQGRGVMDNSSINTTADYAQREYVQE 164 Query: 140 ALQGKEAVSEVLFSKESNQHVVAIARPLEHDGHITGVLIGTVVFNSLSSPVAEVKIGDSG 199 AL G ++S+V+ S + VVA+ +P++ D + GVLIGT+ FN + ++KIG+SG Sbjct: 165 ALLGSVSLSDVIISMVTGNTVVAVGQPIKADNQVVGVLIGTINFNQIVKHATKIKIGESG 224 Query: 200 YGYMTDRTGLIVYHPDQGKILKETLDGNSNKELNALVQVMKSGKASDGFYTYEGVHKYMS 259 Y YM DR GL+V HP Q KIL E L ++ EL LV+ MK+G+A +GFY+YEGV+KY Sbjct: 225 YAYMVDREGLLVSHPVQEKILTENLSDTASGELKQLVERMKAGEAGEGFYSYEGVYKYTC 284 Query: 260 FQPAGNWVVATTANVQDYMAPATEIRNTTXXXXXXXXXXXXXXXXXXTTRNIVHPIIKLE 319 F+P +WVVA TAN +YMA A IR T NIV PI +L+ Sbjct: 285 FEPVESWVVAVTANYDEYMAAALSIRKQT-IILIFSALTIALLIAVLIANNIVKPIKQLQ 343 Query: 320 QAMSRAGEGNLTVHTSIRSGDELQELSEAFNTMIDKQKAIIEKVRAGSVSLXXXXXXXXX 379 M +AG+G+LTV + I + DE++ L E+FN MI+ Q I++ VR G+ L Sbjct: 344 SLMEKAGQGDLTVQSEINTKDEIKTLGESFNQMINSQSTIVKHVRRGAQDLAASSEELAA 403 Query: 380 XXXXXXXXXXXXXXXXXXXXAGAEXXXXXXXXXXXXXXXXXXXXXXXXXKAAATSGNADV 439 AE +A + +++ Sbjct: 404 SSEQVSTSSQEISASIQHVAREAEEQSHAVLDASQTLVELSSMVQLAQNRALKINQSSEN 463 Query: 440 TNQAAQRGRAQVMDTVQAMNTISSSTQETEEQLQAVSELSDQVSTIIGTIXXXXXXXXXX 499 T QAAQ GR +V +TV+A+ I+ +Q+T LQ +++LS +V II TI Sbjct: 464 TKQAAQEGRIKVNNTVEAIEMINIKSQDTMTVLQELNQLSTKVGEIITTINAIATQTNLL 523 Query: 500 XXXXXXXXXXXGEHGRGFSVVAEEVRKLSDETHKQATEISALVSDMVSRITQAVDSMRGA 559 GEHGRGF+VVA+EVR L+++++ +TEIS LV++M+ + +AV SM+ Sbjct: 524 ALNAAIEAARAGEHGRGFAVVADEVRNLAEQSNLGSTEISTLVTEMIKQTEKAVQSMQQE 583 Query: 560 TEAVEGGVRVVTETDHAFVHIINSVELITGSVKEILDITQDEVATSDQIIKLIDSMGSIS 619 EAVE GV VV ETDH F II VE G++KEI+++T++EVATSDQ+I LID + +I+ Sbjct: 584 KEAVEKGVEVVRETDHTFAQIIKVVEETVGNIKEIVELTKEEVATSDQVISLIDKVATIT 643 Query: 620 ELAAINSENVSSATEEQAATVTNFAASAQEVSAMANELEILVEKF 664 E NS+ V++A EEQ A+ AASA+E+SA+A L+ LV +F Sbjct: 644 ENTTANSQQVAAAAEEQTASTETVAASAEEISALAVSLDDLVRQF 688 >Q24VM2.1 Q24VM2_DESHY Putative uncharacterized protein Length = 670 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/645 (37%), Positives = 367/645 (56%), Gaps = 1/645 (0%) Query: 20 PLAISGLISHNLASNALQQTIEEELRDTTASAAKAVDSELEAVESYLSIASKNDTLXXXX 79 P+ + G +S+ +A+NALQ+TIE++L DTT A+A+ +++A + L++ + N+ L Sbjct: 20 PVVVLGFMSYTMAANALQETIEQQLSDTTKQTAEAISGDMKAARNILNVMATNENLAEVI 79 Query: 80 XXXXXXXXXXXXHTYISGIQQDHAKLLESLIIAGTDGQVLLTSSPENPGLDVRDQDYFQQ 139 TY+S +Q++++ L ESLI+ G+ ++ +S N D ++Y Q+ Sbjct: 80 LDQNNGELSSRVFTYLSTLQKENSDLFESLILTDAQGRGVMDNSSINTTADYAQREYVQE 139 Query: 140 ALQGKEAVSEVLFSKESNQHVVAIARPLEHDGHITGVLIGTVVFNSLSSPVAEVKIGDSG 199 AL G ++S+V+ S + VVA+ +P++ D + GVLIGT+ FN + ++KIG+SG Sbjct: 140 ALLGSVSLSDVIISMVTGNTVVAVGQPIKADNQVVGVLIGTINFNQIVKHATKIKIGESG 199 Query: 200 YGYMTDRTGLIVYHPDQGKILKETLDGNSNKELNALVQVMKSGKASDGFYTYEGVHKYMS 259 Y YM DR GL+V HP Q KIL E L ++ EL LV+ MK+G+A +GFY+YEGV+KY Sbjct: 200 YAYMVDREGLLVSHPVQEKILTENLSDTASGELKQLVERMKAGEAGEGFYSYEGVYKYTC 259 Query: 260 FQPAGNWVVATTANVQDYMAPATEIRNTTXXXXXXXXXXXXXXXXXXTTRNIVHPIIKLE 319 F+P +WVVA TAN +YMA A IR T NIV PI +L+ Sbjct: 260 FEPVESWVVAVTANYDEYMAAALSIRKQT-IILIFSALTIALLIAVLIANNIVKPIKQLQ 318 Query: 320 QAMSRAGEGNLTVHTSIRSGDELQELSEAFNTMIDKQKAIIEKVRAGSVSLXXXXXXXXX 379 M +AG+G+LTV + I + DE++ L E+FN MI+ Q I++ VR G+ L Sbjct: 319 SLMEKAGQGDLTVQSEINTKDEIKTLGESFNQMINSQSTIVKHVRRGAQDLAASSEELAA 378 Query: 380 XXXXXXXXXXXXXXXXXXXXAGAEXXXXXXXXXXXXXXXXXXXXXXXXXKAAATSGNADV 439 AE +A + +++ Sbjct: 379 SSEQVSTSSQEISASIQHVAREAEEQSHAVLDASQTLVELSSMVQLAQNRALKINQSSEN 438 Query: 440 TNQAAQRGRAQVMDTVQAMNTISSSTQETEEQLQAVSELSDQVSTIIGTIXXXXXXXXXX 499 T QAAQ GR +V +TV+A+ I+ +Q+T LQ +++LS +V II TI Sbjct: 439 TKQAAQEGRIKVNNTVEAIEMINIKSQDTMTVLQELNQLSTKVGEIITTINAIATQTNLL 498 Query: 500 XXXXXXXXXXXGEHGRGFSVVAEEVRKLSDETHKQATEISALVSDMVSRITQAVDSMRGA 559 GEHGRGF+VVA+EVR L+++++ +TEIS LV++M+ + +AV SM+ Sbjct: 499 ALNAAIEAARAGEHGRGFAVVADEVRNLAEQSNLGSTEISTLVTEMIKQTEKAVQSMQQE 558 Query: 560 TEAVEGGVRVVTETDHAFVHIINSVELITGSVKEILDITQDEVATSDQIIKLIDSMGSIS 619 EAVE GV VV ETDH F II VE G++KEI+++T++EVATSDQ+I LID + +I+ Sbjct: 559 KEAVEKGVEVVRETDHTFAQIIKVVEETVGNIKEIVELTKEEVATSDQVISLIDKVATIT 618 Query: 620 ELAAINSENVSSATEEQAATVTNFAASAQEVSAMANELEILVEKF 664 E NS+ V++A EEQ A+ AASA+E+SA+A L+ LV +F Sbjct: 619 ENTTANSQQVAAAAEEQTASTETVAASAEEISALAVSLDDLVRQF 663 >C4IHC4.1 C4IHC4_CLOBU Methyl-accepting chemotaxis sensory transducer Length = 666 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 239/648 (36%), Positives = 373/648 (57%), Gaps = 2/648 (0%) Query: 20 PLAISGLISHNLASNALQQTIEEELRDTTASAAKAVDSELEAVESYLSIASKNDTLXXXX 79 P++I G +S+ +AS +LQ + +E L T+ A +D+ +++V+S + I S N L Sbjct: 20 PMSILGAVSYKMASTSLQSSTKEHLIQQTSDTASLIDNAIQSVKSTVEICSLNGQLGKIS 79 Query: 80 XXXXXXXXXXXXHTYISGIQQDHAKLLESLIIAGTDGQVLLTSSPENPGLDVRDQDYFQQ 139 YI +Q+ + + +E LI+ + G V++ S + P +D+ D+DY ++ Sbjct: 80 QSENAAYIDDA-FKYICDVQKSNEEFMEVLIVTDSIGTVIIDSESKEPDIDLSDRDYMKK 138 Query: 140 ALQ-GKEAVSEVLFSKESNQHVVAIARPLEHDGHITGVLIGTVVFNSLSSPVAEVKIGDS 198 A+ G +SEVL S+ + + IA P++ +G++ G ++G++ F+S+S ++VKIG++ Sbjct: 139 AISTGDTTMSEVLTSRFTGNPAIFIACPIKENGNVVGTVVGSIKFDSISKYASKVKIGEN 198 Query: 199 GYGYMTDRTGLIVYHPDQGKILKETLDGNSNKELNALVQVMKSGKASDGFYTYEGVHKYM 258 GYGYM D+ GL+V HPD+ KILKE + ++ + ++V+ MK+G+ SDGFYTY+ V+KY+ Sbjct: 199 GYGYMIDKNGLVVAHPDESKILKENVSESTESDFKSIVEKMKAGEKSDGFYTYDNVYKYV 258 Query: 259 SFQPAGNWVVATTANVQDYMAPATEIRNTTXXXXXXXXXXXXXXXXXXTTRNIVHPIIKL 318 +F+PAGNW+VA TA+ +YMA A IRN T +T+ I++PI +L Sbjct: 259 AFEPAGNWIVAVTADYDEYMASAISIRNDTLILVVLAIIIAMVCSYIYSTKGIINPIKEL 318 Query: 319 EQAMSRAGEGNLTVHTSIRSGDELQELSEAFNTMIDKQKAIIEKVRAGSVSLXXXXXXXX 378 ++ M AG+G+L V + S DE+ EL ++FNTMI Q I++ VR+ S L Sbjct: 319 QKLMKLAGDGDLRVKARVGSKDEIGELQKSFNTMIKHQDEIVKSVRSASEHLNTASEEIA 378 Query: 379 XXXXXXXXXXXXXXXXXXXXXAGAEXXXXXXXXXXXXXXXXXXXXXXXXXKAAATSGNAD 438 ++ +A +T+ NA Sbjct: 379 SSLEEISATTEEISATVTNVAEESKNQNTSIVDVSEVLVQLSSLVQLAQNRAQSTNSNAI 438 Query: 439 VTNQAAQRGRAQVMDTVQAMNTISSSTQETEEQLQAVSELSDQVSTIIGTIXXXXXXXXX 498 + + A GR +V +TV+AMN+I+ + +T L+ V+ELS +VS I+ TI Sbjct: 439 NSKKIAHLGRGKVEETVRAMNSINIESNDTFNALKHVNELSVEVSGIVTTINAIAEQTNL 498 Query: 499 XXXXXXXXXXXXGEHGRGFSVVAEEVRKLSDETHKQATEISALVSDMVSRITQAVDSMRG 558 GEHG+GFS+VAEEVR+LS+ET+ +A EI+ LVS+MV +I AV +M Sbjct: 499 LALNAAIEAARAGEHGKGFSIVAEEVRELSEETNNKAKEIAGLVSEMVKQIENAVKAMER 558 Query: 559 ATEAVEGGVRVVTETDHAFVHIINSVELITGSVKEILDITQDEVATSDQIIKLIDSMGSI 618 A VE GV VV+ETD AF+ II+S+E I V EILDIT DEVA+SD++I LI+ + +I Sbjct: 559 ANSEVENGVEVVSETDKAFLDIIDSIEDIAKHVGEILDITSDEVASSDKVISLINDIATI 618 Query: 619 SELAAINSENVSSATEEQAATVTNFAASAQEVSAMANELEILVEKFII 666 +E + N E VS A +E+A N A+A+E SAM+ +L LVEKFI+ Sbjct: 619 TENNSKNCEGVSLAIQEEANVTNNLTATAEETSAMSEQLMGLVEKFIV 666 >B1QWW2.1 B1QWW2_CLOBU Methyl-accepting chemotaxis protein signaling domain Length = 666 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 239/648 (36%), Positives = 373/648 (57%), Gaps = 2/648 (0%) Query: 20 PLAISGLISHNLASNALQQTIEEELRDTTASAAKAVDSELEAVESYLSIASKNDTLXXXX 79 P++I G +S+ +AS +LQ + +E L T+ A +D+ +++V+S + I S N L Sbjct: 20 PMSILGAVSYKMASTSLQSSTKEHLIQQTSDTASLIDNAIQSVKSTVEICSLNGQLGKIS 79 Query: 80 XXXXXXXXXXXXHTYISGIQQDHAKLLESLIIAGTDGQVLLTSSPENPGLDVRDQDYFQQ 139 YI +Q+ + + +E LI+ + G V++ S + P +D+ D+DY ++ Sbjct: 80 QSENAAYIDDA-FKYICDVQKSNEEFMEVLIVTDSIGTVIIDSESKEPDIDLSDRDYMKK 138 Query: 140 ALQ-GKEAVSEVLFSKESNQHVVAIARPLEHDGHITGVLIGTVVFNSLSSPVAEVKIGDS 198 A+ G +SEVL S+ + + IA P++ +G++ G ++G++ F+S+S ++VKIG++ Sbjct: 139 AISTGDTTMSEVLTSRFTGNPAIFIACPIKENGNVVGTVVGSIKFDSISKYASKVKIGEN 198 Query: 199 GYGYMTDRTGLIVYHPDQGKILKETLDGNSNKELNALVQVMKSGKASDGFYTYEGVHKYM 258 GYGYM D+ GL+V HPD+ KILKE + ++ + ++V+ MK+G+ SDGFYTY+ V+KY+ Sbjct: 199 GYGYMIDKNGLVVAHPDESKILKENVSESTESDFKSIVEKMKAGEKSDGFYTYDNVYKYV 258 Query: 259 SFQPAGNWVVATTANVQDYMAPATEIRNTTXXXXXXXXXXXXXXXXXXTTRNIVHPIIKL 318 +F+PAGNW+VA TA+ +YMA A IRN T +T+ I++PI +L Sbjct: 259 AFEPAGNWIVAVTADYDEYMASAISIRNDTLILVVLAIIIAMVCSYIYSTKGIINPIKEL 318 Query: 319 EQAMSRAGEGNLTVHTSIRSGDELQELSEAFNTMIDKQKAIIEKVRAGSVSLXXXXXXXX 378 ++ M AG+G+L V + S DE+ EL ++FNTMI Q I++ VR+ S L Sbjct: 319 QKLMKLAGDGDLRVKARVGSKDEIGELQKSFNTMIKHQDEIVKSVRSASEHLNTASEEIA 378 Query: 379 XXXXXXXXXXXXXXXXXXXXXAGAEXXXXXXXXXXXXXXXXXXXXXXXXXKAAATSGNAD 438 ++ +A +T+ NA Sbjct: 379 SSLEEISATTEEISATVTNVAEESKNQNTSIVDVSEVLVQLSSLVQLAQNRAQSTNSNAI 438 Query: 439 VTNQAAQRGRAQVMDTVQAMNTISSSTQETEEQLQAVSELSDQVSTIIGTIXXXXXXXXX 498 + + A GR +V +TV+AMN+I+ + +T L+ V+ELS +VS I+ TI Sbjct: 439 NSKKIAHLGRGKVEETVRAMNSINIESNDTFNALKHVNELSVEVSGIVTTINAIAEQTNL 498 Query: 499 XXXXXXXXXXXXGEHGRGFSVVAEEVRKLSDETHKQATEISALVSDMVSRITQAVDSMRG 558 GEHG+GFS+VAEEVR+LS+ET+ +A EI+ LVS+MV +I AV +M Sbjct: 499 LALNAAIEAARAGEHGKGFSIVAEEVRELSEETNNKAKEIAGLVSEMVKQIENAVKAMER 558 Query: 559 ATEAVEGGVRVVTETDHAFVHIINSVELITGSVKEILDITQDEVATSDQIIKLIDSMGSI 618 A VE GV VV+ETD AF+ II+S+E I V EILDIT DEVA+SD++I LI+ + +I Sbjct: 559 ANSEVENGVEVVSETDKAFLDIIDSIEDIAKHVGEILDITSDEVASSDKVISLINDIATI 618 Query: 619 SELAAINSENVSSATEEQAATVTNFAASAQEVSAMANELEILVEKFII 666 +E + N E VS A +E+A N A+A+E SAM+ +L LVEKFI+ Sbjct: 619 TENNSKNCEGVSLAIQEEANVTNNLTATAEETSAMSEQLMGLVEKFIV 666 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.310 0.125 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,649,757,483 Number of extensions: 89451402 Number of successful extensions: 311543 Number of sequences better than 1.0e-05: 8928 Number of HSP's gapped: 304776 Number of HSP's successfully gapped: 9421 Length of query: 672 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 529 Effective length of database: 1,713,491,058 Effective search space: 906436769682 Effective search space used: 906436769682 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 135 (56.6 bits)