BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0443.0038.p (429 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZAF7.1 C0ZAF7_BREBN Hypothetical membrane protein 179 4e-43 C5D2A5.1 C5D2A5_9BACI Putative uncharacterized protein 169 3e-40 Q1NUY1.1 Q1NUY1_9DELT Major facilitator superfamily MFS_1 103 4e-20 Q1NKY3.1 Q1NKY3_9DELT Major facilitator superfamily MFS_1 102 6e-20 C1ZTT9.1 C1ZTT9_RHOMR Major Facilitator Superfamily transporter 101 2e-19 >C0ZAF7.1 C0ZAF7_BREBN Hypothetical membrane protein Length = 415 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 124/374 (33%), Positives = 185/374 (49%), Gaps = 15/374 (4%) Query: 23 RLFAAGLVNGIGDRFSSVAMLALILQVTGSGMAVGISLGMRVLPFLFMAPLGGMLAGRLP 82 RL A ++GIGD F+SVA+LAL+L++TG+ +AVGI+L +R LP L PLGG++A R Sbjct: 14 RLLTANFLSGIGDWFNSVAVLALLLEITGTAIAVGITLALRTLPHLIFGPLGGLMADRFD 73 Query: 83 RKTIMMAVDLLRVPVALSFLLVDGAGRLWLLYAGSFIMAAGEALYSPVRKSSIPLLAGPD 142 RK +M+A DL+R VALSFLLV +W++Y G+F + A +LY+P R S +P + P+ Sbjct: 74 RKKVMVACDLVRGFVALSFLLVSEKSDVWMVYTGTFSLVAFSSLYNPARMSLLPKIVDPE 133 Query: 143 SLHKINSLEQLMTGCVLILGAFTGGLVSLWWGPEMXXXXXXXXXXXXXXXIWGISFPAAV 202 L N+L+Q + G V+ +G+ GG+ WG ++ +SF A+ Sbjct: 134 ELATANALDQSIYGIVMAIGSLIGGIFVALWGSDLAFLFN------------ALSFFASA 181 Query: 203 SSGTELLEDSVPAKPVIQDSLKRTGRWQSLRVLIGGSQVLQIILAYELLV---PVINGWD 259 L + P PV L++ + S +I I+ A LL P+ G Sbjct: 182 LFLARLKVPASPNDPVSNVQLQQAAKVSSYGEVIRAITSTPIVYAIFLLKAVWPIGGGII 241 Query: 260 NVLISVYAVQVFHAGDVGVGAFYAALGTGLSLSFFXXXXXXXXXXXXXXXXXXXXXXXXM 319 NVLISVYA QVF AG+ G+G Y A+G G + + Sbjct: 242 NVLISVYAYQVFAAGEWGIGLLYGAIGIGFIIGGILAQRFQRYFYEVAASSFALEGFGML 301 Query: 320 CISGSRHFGVAFVLYILLSLCGGIGSACLDTLVMRETPAAQQPVXXXXXXXXXXXXXXXX 379 S S V + + L ++ GG+G+A L+TL+MR + Sbjct: 302 LTSFSPTIYVTALFFALSTVAGGMGNASLNTLIMRHVTPSYHGRVFALDATISNILIGLS 361 Query: 380 MFSAGWLLEVMEPR 393 M GW+L + +PR Sbjct: 362 MLLGGWILTMADPR 375 >C5D2A5.1 C5D2A5_9BACI Putative uncharacterized protein Length = 324 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 102/278 (36%), Positives = 144/278 (51%), Gaps = 8/278 (2%) Query: 116 GSFIMAAGEALYSPVRKSSIPLLAGPDSLHKINSLEQLMTGCVLILGAFTGGLVSLWWGP 175 S+++AAGEA+Y+P RKS IPLL +++ KINSLEQ+M G VLI G+F+GG+V+ ++GP Sbjct: 19 NSYVLAAGEAIYAPARKSLIPLLVKKENIIKINSLEQVMLGVVLIGGSFSGGIVTFFFGP 78 Query: 176 EMXXXXXXXXXXXXXXXIWGISFPAAVSSGTELLEDSVPAKPVIQDSLKRTGRWQSLRVL 235 +M I+ + F + D + I S+K +++ L Sbjct: 79 DMTFWFNGLSFLIAAMIIFSMPFTNKNRHIQK--NDKKNDESNIFHSIK------TIKKL 130 Query: 236 IGGSQVLQIILAYELLVPVINGWDNVLISVYAVQVFHAGDVGVGAFYAALGTGLSLSFFX 295 + S L I +EL+VP+ NG DNVLI++YAVQ F GD+GVG FY ALG GL LSF Sbjct: 131 MIASSALYIAFLFELIVPLFNGIDNVLINIYAVQEFDLGDIGVGLFYGALGIGLMLSFIV 190 Query: 296 XXXXXXXXXXXXXXXXXXXXXXXMCISGSRHFGVAFVLYILLSLCGGIGSACLDTLVMRE 355 M +S +AF++YI S GI + C D++VM+E Sbjct: 191 AQRIHQHLILIGLTALILEGLFLMILSRVHFAFIAFIVYISASFVSGICNTCFDSIVMKE 250 Query: 356 TPAAQQPVXXXXXXXXXXXXXXXXMFSAGWLLEVMEPR 393 TP+ Q + MF AG LLEV+ R Sbjct: 251 TPSDHQGLVFGLLTTISNTLIGISMFGAGILLEVVNNR 288 >Q1NUY1.1 Q1NUY1_9DELT Major facilitator superfamily MFS_1 Length = 437 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 137/287 (47%), Gaps = 34/287 (11%) Query: 18 SKGYSRLFAAGLVNGIGDRFSSVAMLALILQVTGSGMAVGISLGMRVLPFLFMAPLGGML 77 + Y+R + AG+V+ +G+ F+ +A+ L+ ++TGSG A+ L + LP +AP G++ Sbjct: 31 NPNYTRFWLAGVVSQLGNWFNYIAVFVLLNEMTGSGAAISWFLIAKYLPTALLAPAAGVV 90 Query: 78 AGRLPRKTIMMAVDLLRVPVALSFLLVDGAGRLWLLYAGSFIMAAGEALYSPVRKSSIPL 137 A R RK IM+ DL R V L FLLV + +WL++ + + Y P R++S+P Sbjct: 91 ADRFSRKRIMIFCDLGRFFVVLGFLLVRDSSLVWLVFVLALAQETLWSFYDPARRASVPN 150 Query: 138 LAGPDSLHKINSLEQLMTGCVLILGAFTGGLVSLWWGPEMXXXXXXXXXXXXXXXIWGIS 197 + P+ LH N+L +L GA GGLV+ WG Sbjct: 151 VCRPEELHLANALSGATWSVMLAFGAALGGLVT---------------------AAWGWQ 189 Query: 198 FPAAVSSGTELLEDSVPAKPVI-QDSLKRTGR--WQS---LRVLIGGSQVLQIILAYELL 251 + + T ++ + A V+ +RTG+ W+ L L+ G + L L Sbjct: 190 TAIVIDACTFVVSAGLLATVVLPHTGRRRTGKTGWREYSGLNDLVAGGRYLVHNRHVAAL 249 Query: 252 VPVINGWD-----NVLISVYAVQVFHAGDVGVGA--FYAALGTGLSL 291 + V +GW V++++Y QVF G+ G G+ Y+ G G ++ Sbjct: 250 LMVKSGWALGGGVMVMLAIYGEQVFQLGEQGGGSGILYSMRGVGAAI 296 >Q1NKY3.1 Q1NKY3_9DELT Major facilitator superfamily MFS_1 Length = 437 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 137/287 (47%), Gaps = 34/287 (11%) Query: 18 SKGYSRLFAAGLVNGIGDRFSSVAMLALILQVTGSGMAVGISLGMRVLPFLFMAPLGGML 77 + Y+R + AG+V+ +G+ F+ +A+ L+ ++TGSG A+ L + LP +AP G++ Sbjct: 31 NPNYTRFWLAGVVSQLGNWFNYIAVFVLLNEMTGSGAAISWFLIAKYLPTALLAPAAGVV 90 Query: 78 AGRLPRKTIMMAVDLLRVPVALSFLLVDGAGRLWLLYAGSFIMAAGEALYSPVRKSSIPL 137 A R RK IM+ DL R V L FLLV + +WL++ + + Y P R++S+P Sbjct: 91 ADRFCRKRIMIFCDLGRFFVVLGFLLVRDSSLVWLVFVLALAQETLWSFYDPARRASVPN 150 Query: 138 LAGPDSLHKINSLEQLMTGCVLILGAFTGGLVSLWWGPEMXXXXXXXXXXXXXXXIWGIS 197 + P+ LH N+L +L GA GGLV+ WG Sbjct: 151 VCRPEELHLANALSGATWSVMLAFGAALGGLVT---------------------AAWGWQ 189 Query: 198 FPAAVSSGTELLEDSVPAKPVI-QDSLKRTGR--WQS---LRVLIGGSQVLQIILAYELL 251 + + T ++ + A V+ +RTG+ W+ L L+ G + L L Sbjct: 190 TAIVIDACTFVVSAGLLATVVLPHTGRRRTGKTGWREYSGLNDLVAGGRYLVHNRHVAAL 249 Query: 252 VPVINGWD-----NVLISVYAVQVFHAGDVGVGA--FYAALGTGLSL 291 + V +GW V++++Y QVF G+ G G+ Y+ G G ++ Sbjct: 250 LMVKSGWALGGGVMVMLAIYGEQVFQLGEQGGGSGILYSMRGVGAAI 296 >C1ZTT9.1 C1ZTT9_RHOMR Major Facilitator Superfamily transporter Length = 426 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 94/161 (58%) Query: 14 LKRRSKGYSRLFAAGLVNGIGDRFSSVAMLALILQVTGSGMAVGISLGMRVLPFLFMAPL 73 L RR+ + RL+ L++ +GD F+++A+ L+ ++TGS A+G ++LP+ +PL Sbjct: 21 LVRRNVHFRRLWLGNLISLLGDWFNTIALYTLVSELTGSPFALGGVFLTKLLPWALASPL 80 Query: 74 GGMLAGRLPRKTIMMAVDLLRVPVALSFLLVDGAGRLWLLYAGSFIMAAGEALYSPVRKS 133 G+L R R+ +M+ DL+R + L FLL+D G ++L+Y + + A++ P + + Sbjct: 81 AGLLVDRFDRRRLMIGADLVRAVIVLGFLLIDEPGEVYLVYVLTTLQVVVTAVFQPAKSA 140 Query: 134 SIPLLAGPDSLHKINSLEQLMTGCVLILGAFTGGLVSLWWG 174 SIP + D L N+L +L LGA +GGLV+ W G Sbjct: 141 SIPNIVRTDELLTANALMSATWSVMLALGAASGGLVTAWLG 181 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.141 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,035,980,829 Number of extensions: 74918352 Number of successful extensions: 258874 Number of sequences better than 1.0e-05: 867 Number of HSP's gapped: 259541 Number of HSP's successfully gapped: 867 Length of query: 429 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 290 Effective length of database: 1,751,175,118 Effective search space: 507840784220 Effective search space used: 507840784220 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 133 (55.8 bits)