BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0443.0026.p
         (89 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K585.1 B3K585_9BACI Putative uncharacterized protein                 80   8e-14

>B3K585.1 B3K585_9BACI Putative uncharacterized protein
          Length = 88

 Score = 79.7 bits (195), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 1  MSEKDD--LERKXXXXXXXXXXXXADRTAKEIRQISPKYEIRIQTTLDPIVEETLRYRKI 58
          M+EK D  LER+             DR  +E R +SPKYEIRIQT LDPIVEETL+YR +
Sbjct: 1  MNEKSDQDLERQLSEMLTEGEMEKKDREKEERRLLSPKYEIRIQTQLDPIVEETLKYRSM 60

Query: 59 GHELDDRYDKYLERAKKDHGSED 81
            ELDDRYDKY+++A K    ED
Sbjct: 61 AKELDDRYDKYIDKAVKKEKPED 83


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.311    0.131    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 434,664,260
Number of extensions: 13693539
Number of successful extensions: 31084
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 31084
Number of HSP's successfully gapped: 1
Length of query: 89
Length of database: 3,060,696,203
Length adjustment: 59
Effective length of query: 30
Effective length of database: 2,504,856,318
Effective search space: 75145689540
Effective search space used: 75145689540
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 125 (52.8 bits)