BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0442.0024.p (276 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KAA9.1 B3KAA9_9BACI Putative uncharacterized protein 453 e-126 B1D8Z2.1 B1D8Z2_9BACL PGAP1 family protein 352 2e-95 C0Z4X2.1 C0Z4X2_BREBN Putative uncharacterized protein 265 2e-69 B4BMU2.1 B4BMU2_9BACI Lysophospholipase-like protein 220 1e-55 Q2BAY3.1 Q2BAY3_9BACI Alpha/beta superfamily hydrolase 211 5e-53 >B3KAA9.1 B3KAA9_9BACI Putative uncharacterized protein Length = 275 Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust. Identities = 207/276 (75%), Positives = 243/276 (88%), Gaps = 1/276 (0%) Query: 1 MERNIIIRHNGEELTASIHYPAREKGTSGRCKDRVPLAVICHGFVGNRIGVDRIFVKAAR 60 MER I IRHN EELTA+IHYP +E RC +RVPL +ICHGFVG+RIGVDR+FVK AR Sbjct: 1 MERQITIRHNQEELTATIHYPLKESAHGSRC-NRVPLVIICHGFVGSRIGVDRLFVKTAR 59 Query: 61 ELAADGYMVIRFDYAGCGESSGNYGSEDMESMIAQTRAVLDYGISSADVDPQRITLIGHS 120 E A DGYMVIRFDY GCGESSGNYGSE ++SMIAQTR+VLDYG+S ADVDP RITL+GHS Sbjct: 60 EFAEDGYMVIRFDYIGCGESSGNYGSEGLDSMIAQTRSVLDYGLSCADVDPTRITLLGHS 119 Query: 121 LGGAVALLTGVRDRRVKNLVLWAAVGYPFNDIVKIVGREAYDRAVKSGSADFAGYTFTPV 180 LGGAVAL T VRDRRVKNL+LW+AVGYPFNDIVKI GR+ YD +VKSGSAD+ GY+FTPV Sbjct: 120 LGGAVALQTAVRDRRVKNLILWSAVGYPFNDIVKITGRDVYDTSVKSGSADYLGYSFTPV 179 Query: 181 YFNSLASFQPFQEAGKFSGDVLVIHGTSDDVIPVDYAFLYQKLFWTRPEGRCDKEVIFQA 240 +F+SLA QPFQEA KF+G+VLV+HGTSD+VIPVDYAFL+QK+FW R EGRCDKE+IFQA Sbjct: 180 FFDSLAQGQPFQEAIKFTGNVLVVHGTSDEVIPVDYAFLFQKVFWMRQEGRCDKEIIFQA 239 Query: 241 DHTFSSGPAQAQVMKRTKDWMNQQEHIQEEWQNWMI 276 DHT+S+GP + +++RT+DW+N QE+IQ+EWQNWMI Sbjct: 240 DHTYSAGPQRQLLLERTRDWLNGQENIQQEWQNWMI 275 >B1D8Z2.1 B1D8Z2_9BACL PGAP1 family protein Length = 272 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 160/276 (57%), Positives = 208/276 (75%), Gaps = 4/276 (1%) Query: 1 MERNIIIRHNGEELTASIHYPAREKGTSGRCKDRVPLAVICHGFVGNRIGVDRIFVKAAR 60 ME+ +++RH G ELTA++HYP+ + + + +ICHGF+G+R+GVDR+FVK AR Sbjct: 1 MEKQLLLRHEGLELTATLHYPSDHASDNAKKQ----AIIICHGFIGSRVGVDRLFVKTAR 56 Query: 61 ELAADGYMVIRFDYAGCGESSGNYGSEDMESMIAQTRAVLDYGISSADVDPQRITLIGHS 120 LAA G VIRFDY GCGES+G+YG+ ESMI QTR V+DY VDP+RI L+GHS Sbjct: 57 ALAAQGSYVIRFDYGGCGESNGDYGALGFESMIDQTRTVIDYIAGMDCVDPRRIVLLGHS 116 Query: 121 LGGAVALLTGVRDRRVKNLVLWAAVGYPFNDIVKIVGREAYDRAVKSGSADFAGYTFTPV 180 LGGAVAL+T VRD+RVK LVLW+ V YPFNDIV+IVGR YD +V+ GS D+AG+T PV Sbjct: 117 LGGAVALMTAVRDKRVKRLVLWSPVAYPFNDIVRIVGRAGYDESVQKGSTDYAGFTLQPV 176 Query: 181 YFNSLASFQPFQEAGKFSGDVLVIHGTSDDVIPVDYAFLYQKLFWTRPEGRCDKEVIFQA 240 +F SL QPFQ A +F G+VL++HGTSDD+IPVDY+FLYQK+FWTR +G CDKE+IFQA Sbjct: 177 FFESLLQHQPFQAATRFGGEVLLVHGTSDDLIPVDYSFLYQKVFWTRSDGLCDKEIIFQA 236 Query: 241 DHTFSSGPAQAQVMKRTKDWMNQQEHIQEEWQNWMI 276 +HT+SS Q + ++ T +W+ + Q+EW NW I Sbjct: 237 NHTYSSRHHQEEAIRVTSEWLEGLDKKQQEWHNWSI 272 >C0Z4X2.1 C0Z4X2_BREBN Putative uncharacterized protein Length = 272 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 124/263 (47%), Positives = 179/263 (68%), Gaps = 3/263 (1%) Query: 1 MERNIIIRHNGEELTASIHYPAREKGTSGRCKDRVPLAVICHGFVGNRIGVDRIFVKAAR 60 +ER + I + LTA++H P T+G+ + + PL VICHGF+G+RIGV+R+FVKAAR Sbjct: 4 LERILQIPSDTISLTATLHEPT---CTTGKTRVKYPLVVICHGFIGSRIGVNRLFVKAAR 60 Query: 61 ELAADGYMVIRFDYAGCGESSGNYGSEDMESMIAQTRAVLDYGISSADVDPQRITLIGHS 120 ELA+ G+ V+RFDY GCGES G+YG+ ++ ++AQTR VLD+ + VD +R+ L+GHS Sbjct: 61 ELASHGFGVLRFDYGGCGESDGDYGAGGLDVLLAQTRDVLDHVFTLEQVDQERVFLLGHS 120 Query: 121 LGGAVALLTGVRDRRVKNLVLWAAVGYPFNDIVKIVGREAYDRAVKSGSADFAGYTFTPV 180 LGGAV++LT +D+R+ +L+LWA V PF+DIV+IVG + Y A+ G D GY Sbjct: 121 LGGAVSVLTASQDKRIHSLILWAPVARPFDDIVRIVGEKEYKEALSYGKTDHLGYGLEKR 180 Query: 181 YFNSLASFQPFQEAGKFSGDVLVIHGTSDDVIPVDYAFLYQKLFWTRPEGRCDKEVIFQA 240 +F SL + P ++A +F GDVL++HG DDVI VD F Y++ R G C+ EV+ Sbjct: 181 FFQSLGTALPLRQAKQFEGDVLILHGNRDDVIAVDAMFHYERELHLRRRGSCETEVVVGG 240 Query: 241 DHTFSSGPAQAQVMKRTKDWMNQ 263 DHTFSS + +++ TK W+N+ Sbjct: 241 DHTFSSADSYKRLIASTKSWLNR 263 >B4BMU2.1 B4BMU2_9BACI Lysophospholipase-like protein Length = 262 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/263 (44%), Positives = 154/263 (58%), Gaps = 10/263 (3%) Query: 7 IRHNGEELTASIHYPAREKGTSGRCKDRVPLAVICHGFVGNRIGVDRIFVKAARELAADG 66 I GE L S+H PA+ + P+ +ICHGF+G RIGVDR+FV+AA AA+G Sbjct: 8 IESGGERLAVSLHPPAQ--------NEEQPVVIICHGFIGTRIGVDRLFVQAAEPFAAEG 59 Query: 67 YMVIRFDYAGCGESSGNYGSEDMESMIAQTRAVLDYGISSADVDPQRITLIGHSLGGAVA 126 V+RFDY GCGESSG YGS I QT+ ++ S + + L+GHSLGGAVA Sbjct: 60 MGVVRFDYVGCGESSGEYGSNRFSDFIRQTQDIIQAVTSFPIFQHRPVVLLGHSLGGAVA 119 Query: 127 LLTGVRDRRVKNLVLWAAVGYPFNDIVKIVGREAYDRAVKSGSADFAGYTFTPVYFNSLA 186 +T DRRV LVLWA V YP+ ++++I + R V+ D+ GY P +F SL Sbjct: 120 TITAALDRRVDRLVLWAPVAYPYEELIRI-ATQGQGR-VEGEGVDYHGYRLPPAFFASLQ 177 Query: 187 SFQPFQEAGKFSGDVLVIHGTSDDVIPVDYAFLYQKLFWTRPEGRCDKEVIFQADHTFSS 246 P + A + SGDVL+IHG D IPV A +Y+K+F R E RC K ++ QADHTFS Sbjct: 178 DAHPLEAAAQVSGDVLLIHGIEDQEIPVTDADVYEKVFLQRDEWRCHKWLLPQADHTFSQ 237 Query: 247 GPAQAQVMKRTKDWMNQQEHIQE 269 A+ Q+ T W+ + I E Sbjct: 238 WSARQQLFHVTSSWLAGRVEIAE 260 >Q2BAY3.1 Q2BAY3_9BACI Alpha/beta superfamily hydrolase Length = 255 Score = 211 bits (537), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 103/229 (44%), Positives = 147/229 (64%) Query: 34 RVPLAVICHGFVGNRIGVDRIFVKAARELAADGYMVIRFDYAGCGESSGNYGSEDMESMI 93 R PL +ICHGF G+RIGVDR+FVK + L ADGY+V+RFDY GCGES G YG + ++ Sbjct: 16 RYPLVIICHGFTGSRIGVDRLFVKTSNRLTADGYLVLRFDYEGCGESPGEYGETGLPDLL 75 Query: 94 AQTRAVLDYGISSADVDPQRITLIGHSLGGAVALLTGVRDRRVKNLVLWAAVGYPFNDIV 153 QT + +D+ + +P I+LIGHSLGGAVA+L +D R++ L++W+A P+ DIV Sbjct: 76 EQTLSAIDFAVKLDYANPHSISLIGHSLGGAVAVLAAAKDVRIRKLIIWSASARPYQDIV 135 Query: 154 KIVGREAYDRAVKSGSADFAGYTFTPVYFNSLASFQPFQEAGKFSGDVLVIHGTSDDVIP 213 IVG E K S D+ GY T YF+SL ++P +E + GDVL++HGT+D IP Sbjct: 136 CIVGSEKVKALDKGASLDYLGYQLTDNYFSSLKRYEPLEELAAYRGDVLIVHGTADQDIP 195 Query: 214 VDYAFLYQKLFWTRPEGRCDKEVIFQADHTFSSGPAQAQVMKRTKDWMN 262 V ++ Y + F R EG C + A HT+S+G A++++ T +W+ Sbjct: 196 VSHSGRYAEEFRKRKEGSCSLHYVTGACHTYSAGRCFAELIECTSEWLK 244 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.137 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,729,959,730 Number of extensions: 71566314 Number of successful extensions: 176664 Number of sequences better than 1.0e-05: 342 Number of HSP's gapped: 177122 Number of HSP's successfully gapped: 342 Length of query: 276 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 142 Effective length of database: 1,798,280,193 Effective search space: 255355787406 Effective search space used: 255355787406 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)