BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0442.0021.p (314 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A3DGH8.1 A3DGH8_CLOTH Putative uncharacterized protein 201 7e-50 B4BC10.1 B4BC10_CLOTM Putative uncharacterized protein 201 1e-49 C1T9V2.1 C1T9V2_9FIRM Putative uncharacterized protein 180 2e-43 B3KAA5.1 B3KAA5_9BACI Putative uncharacterized protein 166 4e-39 A8MJC4.1 A8MJC4_ALKOO Putative uncharacterized protein 143 2e-32 >A3DGH8.1 A3DGH8_CLOTH Putative uncharacterized protein Length = 322 Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 105/249 (42%), Positives = 152/249 (61%), Gaps = 3/249 (1%) Query: 67 RLPEAIKYLNSNIYAVTPYQATVLTLKLENLHKAALKAWESKFMN-SIVQRKLTSVYKAG 125 +LPE I +L+ NI V+ +A + +LE L + L E +F N +Q K++ VY G Sbjct: 75 KLPEVIDFLDENISVVSKEKAAEMLDRLEKLQQEFLPNIEKRFYNDETIQVKMSEVYTQG 134 Query: 126 ISMAKLADSIDDTSLRSLLKSAGESGYKLETAEGSFFPVIDYAAYRKYRVYVTADIRNYF 185 + K+ + I+D +R LL SGY++ETAEG FFPVIDY Y+KY YVT D++ Y Sbjct: 135 FDLGKVYE-IEDEKVRELLSKTKNSGYRVETAEGMFFPVIDYEVYKKYSEYVTEDVKEYI 193 Query: 186 SIMGTETDLPSSKDNGLIISWGDVAARALAQEEFIQSYPKSNRISAVKALYSTYVTNTFY 245 +IM E++ P +KD L++ W +V RAL QE+FI+ Y S ++ VK LY Y+T T + Sbjct: 194 NIMAEESNNPPAKDAALVVGWDEVLKRALNQEKFIKRYEDSAKVGKVKELYRKYLTFTLF 253 Query: 246 GQNNTPLFHYDNLEMDLEAQKAYSGLLAKNNGSSPFLQKLDGFMKLLKDNGYKLDDSVTE 305 G NNTPLF Y++ MD A++AY L N S F + + +MK+L NGYKL D V E Sbjct: 254 GLNNTPLFEYNSKVMDAGAKEAYIKFLESEN-SGGFYEVVKDYMKVLDKNGYKLTDEVAE 312 Query: 306 YLKSEVPQS 314 + ++ V +S Sbjct: 313 FRENLVEKS 321 >B4BC10.1 B4BC10_CLOTM Putative uncharacterized protein Length = 299 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 105/249 (42%), Positives = 152/249 (61%), Gaps = 3/249 (1%) Query: 67 RLPEAIKYLNSNIYAVTPYQATVLTLKLENLHKAALKAWESKFMN-SIVQRKLTSVYKAG 125 +LPE I +L+ NI V+ +A + +LE L + L E +F N +Q K++ VY G Sbjct: 52 KLPEVIDFLDENISVVSKEKAAEMLDRLEKLQQEFLPNIEKRFYNDETIQVKMSEVYTQG 111 Query: 126 ISMAKLADSIDDTSLRSLLKSAGESGYKLETAEGSFFPVIDYAAYRKYRVYVTADIRNYF 185 + K+ + I+D +R LL SGY++ETAEG FFPVIDY Y+KY YVT D++ Y Sbjct: 112 FDLGKVYE-IEDEKVRELLSKTKNSGYRVETAEGMFFPVIDYEVYKKYSEYVTEDVKEYI 170 Query: 186 SIMGTETDLPSSKDNGLIISWGDVAARALAQEEFIQSYPKSNRISAVKALYSTYVTNTFY 245 +IM E++ P +KD L++ W +V RAL QE+FI+ Y S ++ VK LY Y+T T + Sbjct: 171 NIMAEESNNPPAKDAALVVGWDEVLKRALNQEKFIKRYEDSAKVGKVKELYRKYLTFTLF 230 Query: 246 GQNNTPLFHYDNLEMDLEAQKAYSGLLAKNNGSSPFLQKLDGFMKLLKDNGYKLDDSVTE 305 G NNTPLF Y++ MD A++AY L N S F + + +MK+L NGYKL D V E Sbjct: 231 GLNNTPLFEYNSKVMDAGAKEAYIKFLESEN-SGGFYEVVKDYMKVLDKNGYKLTDEVAE 289 Query: 306 YLKSEVPQS 314 + ++ V +S Sbjct: 290 FRENLVEKS 298 >C1T9V2.1 C1T9V2_9FIRM Putative uncharacterized protein Length = 310 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/246 (40%), Positives = 149/246 (60%), Gaps = 5/246 (2%) Query: 68 LPEAIKYLNSNIYAVTPYQATVLTLKLENLHKAALKAWESKFMNSIVQRKLTSVYKAGIS 127 + E ++L+ NI +V+ AT + + E K L E+KF +Q K+ + YKA S Sbjct: 53 VDEIAEFLSKNISSVSKEDATKMVVGFEEEQKDYLTLLENKFNEDGMQDKIINEYKAITS 112 Query: 128 MAKLADSIDDTSLRSLLKSAGESGYKLETAEGSFFPVIDYAAYRKYRVYVTADIRNYFSI 187 + I D L+ L+ +SGYK+ETAEG FFP+IDY Y+ + +VT D+++Y I Sbjct: 113 NS----DISDIELKELMSVTKKSGYKIETAEGFFFPIIDYGFYKNFSSFVTDDMKDYIKI 168 Query: 188 MGTETDLPSSKDNGLIISWGDVAARALAQEEFIQSYPKSNRISAVKALYSTYVTNTFYGQ 247 M E++ +KD L+ISW +V RAL QE+FI S+ S +I+ +K LY+ YVT YG Sbjct: 169 MTEESNKIPAKDAALVISWNEVLERALQQEKFINSHSDSVKINEIKKLYNKYVTFVIYGT 228 Query: 248 NNTPLFHYDNLEMDLEAQKAYSGLLAKNNGSSPFLQKLDGFMKLLKDNGYKLDDSVTEYL 307 NNTPLF YD+ ++ EA++ Y + KN G S L+ L GF+++L+DN Y+L V +Y Sbjct: 229 NNTPLFSYDSETINPEAREVYQNAV-KNVGDSHLLKSLTGFLEILEDNHYRLTAEVGKYR 287 Query: 308 KSEVPQ 313 +S V + Sbjct: 288 ESLVKK 293 >B3KAA5.1 B3KAA5_9BACI Putative uncharacterized protein Length = 310 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 135/241 (56%), Gaps = 2/241 (0%) Query: 74 YLNSNIYAVTPYQATVLTLKLENLHKAALKAWESKFMNSIVQRKLTSVYKAGISMAKLAD 133 Y+ +I +VT YQAT+L LKLEN AL A K +Q KL ++YK G + + Sbjct: 68 YITKHIRSVTAYQATMLVLKLENAMNDALPAKTDKVYEIGIQDKLMNLYKFGEPINTTIN 127 Query: 134 SIDDTSLRSLLKSAGESGYKLETAEGSFFPVIDYAAYRKYRVYVTADIRNYFSIMGTETD 193 D +LR +L + +SGY+L T EG FP+IDY + Y+ Y+ DI+ Y IM E++ Sbjct: 128 KTKDETLRKVLINLRDSGYRLYTTEGVIFPIIDYTTLKPYKPYINKDIQAYIDIMVVESE 187 Query: 194 LPSSKDNGLIISWGDVAARALAQEEFIQSYPKSNRISAVKALYSTYVTNTFYGQNNTPLF 253 P+ D L+I W +V R L QE FI ++PKSNR + VK + +YG NNTPLF Sbjct: 188 KPAVSDAALVIPWSEVIDRGLTQEAFISAHPKSNRTADVKLKLRFTELSLYYGYNNTPLF 247 Query: 254 HYDNLEMDLEAQKAYSGLLAKNNG--SSPFLQKLDGFMKLLKDNGYKLDDSVTEYLKSEV 311 Y++ +D E ++A+ +L ++ S L+KL + +L+ N KL+ V Y V Sbjct: 248 KYEDNLLDPEVRQAFDKVLKDSDAVSKSALLKKLKSWSDVLESNNDKLNQEVERYRAKAV 307 Query: 312 P 312 P Sbjct: 308 P 308 >A8MJC4.1 A8MJC4_ALKOO Putative uncharacterized protein Length = 307 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 2/241 (0%) Query: 68 LPEAIKYLNSNIYAVTPYQATVLTLKLENLHKAALKAWESKFMNSIVQRKLTSVYKAGIS 127 L + +++ NI V+ A ++ LE K LK E +F Q L +++ + Sbjct: 63 LDSIVSFIDKNIGRVSYKNAGIMVTTLEEAQKVFLKNLEDRFYTPETQEGLDKLFQVEMK 122 Query: 128 MAKLADSIDDTSLRSLLKSAGESGYKLETAEGSFFPVIDYAAYRKYRVYVTADIRNYFSI 187 + LAD+ L+ LL+ + GYKL AEG+ FP+IDY Y KY +V +++ Y + Sbjct: 123 LDCLADAAK-GDLKELLEESTAKGYKLAAAEGAIFPIIDYDFYTKYSSFVDEELKAYIEV 181 Query: 188 MGTETDLPSSKDNGLIISWGDVAARALAQEEFIQSYPKSNRISAVKALYSTYVTNTFYGQ 247 M + S+ D L+I W ++ RA+ QE+FI+ YP S++I AVK L + Y F G Sbjct: 182 MAVHSKKLSAVDAALVIGWEELVQRAIQQEKFIEKYPDSDKIEAVKELSNWYRYYIFNGL 241 Query: 248 NNTPLFHYDNLEMDLEAQKAYSGLLAKNNGSSPFLQKLDGFMKLLKDNGYKLDDSVTEYL 307 NTPLF + + EM+ EA+ Y+ + + + ++++ FM LL+ NGYK V ++ Sbjct: 242 PNTPLFSHKDDEMNPEAKSVYASYIQRES-EGKLIEEIKEFMCLLEKNGYKGSKEVENFI 300 Query: 308 K 308 + Sbjct: 301 E 301 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.130 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,464,529,761 Number of extensions: 54826009 Number of successful extensions: 101023 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 101013 Number of HSP's successfully gapped: 13 Length of query: 314 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 179 Effective length of database: 1,788,859,178 Effective search space: 320205792862 Effective search space used: 320205792862 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 131 (55.1 bits)