BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0442.0016.p (221 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q187S7.1 Q187S7_CLOD6 Putative acyl-CoA thioesterase 312 1e-83 B5JDA0.1 B5JDA0_9BACT BAAT / Acyl-CoA thioester hydrolase C term... 115 2e-24 A5CZQ3.1 A5CZQ3_PELTS Hydrolases of the alpha/beta superfamily 107 5e-22 A8SII0.1 A8SII0_9FIRM Putative uncharacterized protein 103 8e-21 B9E486.1 B9E486_CLOK1 Putative uncharacterized protein 102 2e-20 >Q187S7.1 Q187S7_CLOD6 Putative acyl-CoA thioesterase Length = 432 Score = 312 bits (799), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 140/214 (65%), Positives = 183/214 (85%) Query: 8 DNEITRTKDIYLHGTSKGGELVLLLASRYKQIRKVVAVEPHTYCFQALDGLMSGRNVSSW 67 +NEIT TK+I++HGTSKGGEL LLASRY+QI+KVV +PH YCFQAL+GLMSG + SSW Sbjct: 212 ENEITSTKEIFVHGTSKGGELAFLLASRYEQIKKVVVSQPHIYCFQALNGLMSGNDTSSW 271 Query: 68 SYQGKSIPFIEVDNKIFFEDQKKDIEKGIPFGFASTYRKSIENATNLEESRIKVENSQAE 127 SY+G+ P+I+VDN IFFE+QKK+I K IPFGF STY+KS++ A N +E+RIK+ENS+A+ Sbjct: 272 SYKGEPFPYIKVDNDIFFEEQKKNISKDIPFGFNSTYKKSLKRAENRKEARIKIENSKAD 331 Query: 128 ILLICGKKDNIWNSYDACLEILKNLKSNNYKHHAELLSYENMGHPMPIPYIVPISLTLEM 187 IL+I GK+DNIWNSY+ACLE L+ + NNY ++ ELL+Y NMGHP+PIPYI+P+ TL M Sbjct: 332 ILMIAGKEDNIWNSYEACLEALEIFEENNYPYNVELLTYNNMGHPLPIPYIMPLKETLCM 391 Query: 188 PMNGGVFSSGGTIEGNAEGQFQSFKRTIEFFNEP 221 M+GG+FSSGGT+EGN++GQF+S+ RTIEF+ +P Sbjct: 392 SMSGGIFSSGGTVEGNSKGQFESWNRTIEFYKKP 425 >B5JDA0.1 B5JDA0_9BACT BAAT / Acyl-CoA thioester hydrolase C terminal domain family protein Length = 292 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 102/207 (49%), Gaps = 29/207 (14%) Query: 12 TRTKDIYLHGTSKGGELVLLLASRYKQIRKVVAVEPHTYCFQALDGLMSGRNVSSWSYQG 71 + K + L G SKGGEL LLLASRY Q+R V+A P FQ + GR +SSWSY G Sbjct: 106 VKDKKLVLWGGSKGGELALLLASRYPQVRGVIATVPSAVVFQGI----GGRVMSSWSYNG 161 Query: 72 KSIPFIEVDNKIFFEDQKKDIEKGIPFGFASTYRKSIENATNLEESRIKVENSQAEILLI 131 +SIPF+ + D K + + Y KS+E + +EE+ I+VEN ILL+ Sbjct: 162 ESIPFVPY--------AEYDWSKIVNSQYVEAYEKSLEQSKFVEEAAIEVENINGPILLL 213 Query: 132 CGKKDNIWNSYDACLEILKNLKSNNYKHHAELLSYENMGHPMPIPYIVPISLTLEMPMNG 191 G+ D +W S I++ LK ++ + + +YEN GH + Y++ Sbjct: 214 TGRSDTMWPSSQMGDMIVRRLKEKDFTYPIDHYAYENAGHTLNDAYMM------------ 261 Query: 192 GVFSSGGTIEGNAEGQFQSFKRTIEFF 218 GGT EGN + R EF Sbjct: 262 -----GGTKEGNRKANIDLALRINEFL 283 >A5CZQ3.1 A5CZQ3_PELTS Hydrolases of the alpha/beta superfamily Length = 871 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 8/202 (3%) Query: 21 GTSKGGELVLLLASRYKQIRKVVAVEPHTYCFQALDGLMSGRNVSSWSYQGKSIPFIEVD 80 G SKG EL LL AS Y QI+ VVA P F+ + + SSW+Y+G+ + F+ Sbjct: 666 GASKGAELALLAASHYPQIKAVVAKSPSAVVFEGISKDSGKNHQSSWTYKGEPLSFVPT- 724 Query: 81 NKIFFEDQKKD----IEKGIPFGFASTYRKSIENATNLEESRIKVENSQAEILLICGKKD 136 IF E+ + K P+ A Y +++N +E++ IKVEN +LL+ G +D Sbjct: 725 --IFTEELAGSYFAAVAKKEPWSTAPLYEYALQNQEAVEKATIKVENINGPVLLVSGGRD 782 Query: 137 NIWNSYDACLEILKNLKSNNYKHHAELLSYENMGHPMPIPYIVPISLTLEMPMNGGVFSS 196 W S I++ L+ + L Y + GH + PY L +P G + Sbjct: 783 GAWPSGKMAEMIMQRLREKGHPFPDMHLHYRDAGHQISTPYSPTTVYWLTLP-GGFIEDL 841 Query: 197 GGTIEGNAEGQFQSFKRTIEFF 218 GGT EGNA S+ + I+FF Sbjct: 842 GGTPEGNAAASMDSWPKIIDFF 863 >A8SII0.1 A8SII0_9FIRM Putative uncharacterized protein Length = 229 Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 25/208 (12%) Query: 11 ITRTKDIYLHGTSKGGELVLLLASRYKQIRKVVAVEPHTYCFQALDGLMSGRNVSSWSYQ 70 I I + G SKG E L LA++YK+I +V + P +Y F LD + G SSW+++ Sbjct: 42 INENTPITVLGASKGAEYALNLATKYKEIDNLVLIAPSSYNFSGLDFVNYG---SSWTWK 98 Query: 71 GKSIPFIEVDNKIFFEDQKKDIEKGIPFGFASTYRKSIENATNLEESRIKVENSQAEILL 130 GK +PFI++ ++ D P + +TY ++E ++ +E I V+ ++A ILL Sbjct: 99 GKELPFIDL--------KRGDFSYSEPISYKATYETAVERDSSAKEKLIPVKKTKANILL 150 Query: 131 ICGKKDNIWNSYDACLEILKNLKSNNYKHHAELLSYENMGHPMPIPYIVPISLTLEMPMN 190 I GK D +WNS++ I+K+ K + ++ SYEN GH E + Sbjct: 151 ISGKDDQMWNSFEMS-NIIKSQKDD-----VKICSYENAGHIF--------FGDGEQKFS 196 Query: 191 GGVFSSGGTIEGNAEGQFQSFKRTIEFF 218 G + +GGT GN E +S K +F Sbjct: 197 GYIIKTGGTKSGNKEANKKSIKEINDFL 224 >B9E486.1 B9E486_CLOK1 Putative uncharacterized protein Length = 118 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 12/110 (10%) Query: 112 TNLEESRIKVENSQAEILLICGKKDNIWNSYDACLEILKNLKSNNYKHHAELLSYENMGH 171 T LE K+++ + I L+ +K+ + Y N + ELL+ + MGH Sbjct: 14 TELEILDYKIKSDKIIITLVSNRKNVVCPYY------------NQASQNVELLTCDKMGH 61 Query: 172 PMPIPYIVPISLTLEMPMNGGVFSSGGTIEGNAEGQFQSFKRTIEFFNEP 221 PMP PYI+PIS TL + M GGVFSSGGTIEGNAEGQF+S++RTIEFF EP Sbjct: 62 PMPAPYIIPISETLSINMMGGVFSSGGTIEGNAEGQFKSWQRTIEFFMEP 111 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.135 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,301,014,512 Number of extensions: 53593229 Number of successful extensions: 147211 Number of sequences better than 1.0e-05: 57 Number of HSP's gapped: 147156 Number of HSP's successfully gapped: 57 Length of query: 221 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 90 Effective length of database: 1,826,543,238 Effective search space: 164388891420 Effective search space used: 164388891420 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)