BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0442.0015.p
         (64 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9E485.1 B9E485_CLOK1 Putative uncharacterized protein                 75   2e-12
A5N0B5.1 A5N0B5_CLOK5 Predicted transcriptional regulator              75   2e-12

>B9E485.1 B9E485_CLOK1 Putative uncharacterized protein
          Length = 172

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 47/63 (74%)

Query: 1   MADIFKDFKLEELETLSKFLLKLYQFDGSKMDGLEVDVQVPNTFSEEEIRTAIERFSIRR 60
           MADIFKDF  EE+ETL K L+KLY FDG +MDG E ++++PN   +EE+R  IE+F  RR
Sbjct: 110 MADIFKDFTKEEVETLWKLLIKLYCFDGVEMDGFEENIEIPNIDMDEEVRVGIEKFLKRR 169

Query: 61  NGK 63
           + K
Sbjct: 170 SVK 172


>A5N0B5.1 A5N0B5_CLOK5 Predicted transcriptional regulator
          Length = 172

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 47/63 (74%)

Query: 1   MADIFKDFKLEELETLSKFLLKLYQFDGSKMDGLEVDVQVPNTFSEEEIRTAIERFSIRR 60
           MADIFKDF  EE+ETL K L+KLY FDG +MDG E ++++PN   +EE+R  IE+F  RR
Sbjct: 110 MADIFKDFTKEEVETLWKLLIKLYCFDGVEMDGFEENIEIPNIDMDEEVRVGIEKFLKRR 169

Query: 61  NGK 63
           + K
Sbjct: 170 SVK 172


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.139    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 356,303,294
Number of extensions: 11006224
Number of successful extensions: 30470
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 30470
Number of HSP's successfully gapped: 2
Length of query: 64
Length of database: 3,060,696,203
Length adjustment: 36
Effective length of query: 28
Effective length of database: 2,721,539,663
Effective search space: 76203110564
Effective search space used: 76203110564
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)