BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0442.0014.p (430 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2B1T0.1 Q2B1T0_9BACI Putative uncharacterized protein 201 8e-50 C1ZPU5.1 C1ZPU5_RHOMR Putative uncharacterized protein 163 3e-38 A5D600.1 A5D600_PELTS Putative uncharacterized protein 163 3e-38 Q73J35.1 Q73J35_TREDE Putative uncharacterized protein 155 5e-36 Q1QL38.1 Q1QL38_NITHX Tetratricopeptide TPR_2 155 6e-36 >Q2B1T0.1 Q2B1T0_9BACI Putative uncharacterized protein Length = 640 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 139/399 (34%), Positives = 206/399 (51%), Gaps = 50/399 (12%) Query: 75 MKWEHPAHEQLALQLIESMRNQYERELIFE-ALVLWNGYSRQTRPAVKKTGSFCAAIEYL 133 +W + ++A M + E L+ + + LW Y +T KK G + A + YL Sbjct: 243 FEWPNEGAAEVADLFARDMEKEGEESLVIDMGVTLWMKYIEKTGKKPKKAGIYVAGLRYL 302 Query: 134 ---LSEEYGFNVSQAELADKYEVTAATISRKVKEILNYIEDY------------------ 172 L+ G +Q +L Y V+AA+IS EI + IED Sbjct: 303 VGTLANPSGPVYTQKQLGTLYGVSAASISNAYGEIYHAIEDVLEEIFQSELQEPASLMES 362 Query: 173 --------GMGGEA--------DEL--AMLNGP------GTPKDKAQALLYMAMEASSSK 208 G+ GE D ++N P T K KAQ ++Y A EAS +K Sbjct: 363 ERMMQDLMGLIGEQEFENEQDLDSFLQGLMNKPLPKKASATKKGKAQDMMYEAFEASGAK 422 Query: 209 RRIQLAETALEMYPDSSDAYLILAEESDNEQEARAYLKAGIAAGERELGELFFEKNKGDF 268 R +LA+ ALE+ P +SDAY ILAE+ D + A+ + K G+ AG+++LG+ FF++NKG F Sbjct: 423 R-YKLAKEALELNPLNSDAYNILAEKEDLPEAAKLF-KKGMDAGQKDLGDGFFKENKGHF 480 Query: 269 WGLHETRPYIRICKSYAESCWFGGNAKEAAQILEHILELNTEDNTGARYLLAAVYLYSNQ 328 WGL ETRP++R +YA++ GN EA E +LELN DN G R+++ Y S Q Sbjct: 481 WGLIETRPFMRAKANYAQALHALGNLPEAIGHYEELLELNPNDNQGVRFVMFQAYCESRQ 540 Query: 329 LKQAEQVLEKYGKDDAAAAFAYDRIILEYKKNGITSQLKMLYRVARGVNKHVPDYLLGVK 388 K+A ++LE Y ++ AA F ++++LE + G TS+ L + A+ N H DYL G K Sbjct: 541 YKKARKLLEAYPEEMAAGLF--NQVLLELLEKGFTSKAAALLKKAKKHNPHASDYLSGKK 598 Query: 389 RLPHNLPDFVGMGDSNEAIEYVIMHSRLWASVPDLLKWM 427 ++P +PD+ GD NEAI Y H LW +P + W+ Sbjct: 599 KMPRTIPDYYSWGDKNEAITYADGHLHLWQGIPGIQTWL 637 >C1ZPU5.1 C1ZPU5_RHOMR Putative uncharacterized protein Length = 287 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 97/248 (39%), Positives = 136/248 (54%), Gaps = 2/248 (0%) Query: 184 LNGPG-TPKDKAQALLYMAMEASSSKRRIQLAETALEMYPDSSDAYLILAEESDNEQEAR 242 L PG TP ++AQAL+Y A + RRI+LA AL+ PD +DA+++LAEE+D EA Sbjct: 35 LAPPGSTPLEQAQALIYQAWDEPDRTRRIELARRALDCSPDCADAWVVLAEEADELAEAL 94 Query: 243 AYLKAGIAAGERELGELFFEKNKGDFWGLHETRPYIRICKSYAESCWFGGNAKEAAQILE 302 + G+AAGER LG + G W + E RPY+R A+ W G + A Sbjct: 95 RCYREGVAAGERVLGPAPLAQECGQLWQIPEARPYLRARVGLAQCLWLLGEQETAIAHFW 154 Query: 303 HILELNTEDNTGARYLLAAVYLYSNQLKQAEQVLEKYGKDDAAAAFAYDRIILEYKKNGI 362 +L L+ D+ RYLL L N L ++++ Y DD +AA+ Y R ++ Y+ G Sbjct: 155 ELLRLDGGDHLRVRYLLLEALLIRNDLAALRRLIDMY-PDDESAAWCYSRALVLYRSEGD 213 Query: 363 TSQLKMLYRVARGVNKHVPDYLLGVKRLPHNLPDFVGMGDSNEAIEYVIMHSRLWASVPD 422 T + R AR N HVPDYLLG K+LP LPD++ G EAI+Y + W + PD Sbjct: 214 TLMARQALREARQANPHVPDYLLGRKKLPRPLPDYIEPGTVEEAIDYASVAQPYWKNTPD 273 Query: 423 LLKWMLKQ 430 L W+ +Q Sbjct: 274 ALSWLRRQ 281 >A5D600.1 A5D600_PELTS Putative uncharacterized protein Length = 500 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 134/239 (56%), Gaps = 2/239 (0%) Query: 193 KAQALLYMAMEASSSKRRIQLAETALEMYPDSSDAYLILAEESDNEQEARAYLKAGIAAG 252 +AQ L+Y A EA S +RR+ LA AL++ P +DAY++LAEES + QE R + G+ AG Sbjct: 260 RAQELIYDAWEAESRQRRLYLARRALKISPYCADAYVLLAEESRDPQEVRELYEKGVQAG 319 Query: 253 ERELGELFFEKNKGDFWGLHETRPYIRICKSYAESCWFGGNAKEAAQILEHILELNTEDN 312 LG+LFF+KN G FW + ETRPY+R A+S W G ++A + +L LN DN Sbjct: 320 RLSLGDLFFKKNAGKFWLILETRPYMRALAGLADSLWKTGQRQQAIGHYKEMLRLNPNDN 379 Query: 313 TGARYLLAAVYLYSNQLKQAEQVLEKYGKDDAAAAFAYDRIILEYKKNGITSQLKMLYRV 372 G RY+LAA L +L +Y + D + Y+R + ++ +G +++ Y Sbjct: 380 QGIRYILAACLLEEEMDDDLGALLNQY-EGDISCFMHYNRALWSFRTSGGSNEQSDAYLA 438 Query: 373 -ARGVNKHVPDYLLGVKRLPHNLPDFVGMGDSNEAIEYVIMHSRLWASVPDLLKWMLKQ 430 A N HVP YLLG K++P+ LPD+ +G EA+ Y + W P L W+ + Sbjct: 439 EALESNSHVPAYLLGKKKIPYCLPDYYALGSEEEAVIYAERAKKAWQKTPAALVWLARH 497 >Q73J35.1 Q73J35_TREDE Putative uncharacterized protein Length = 259 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 136/250 (54%), Gaps = 9/250 (3%) Query: 183 MLNGPGTP-------KDKAQALLYMAMEASSSKRRIQLAETALEMYPDSSDAYLILAEES 235 +L+ P P + KAQ ++Y A ++ SS +R +LA+ ALE+ P+ DAY ILA E Sbjct: 4 ILDFPDFPFEFEQNNEQKAQDIVYDAWDSDSSAQRKRLAQKALELDPNCVDAYCILAAEY 63 Query: 236 DNEQEARAYLKAGIAAGERELGELFFEKNKGDFWGLHETRPYIRICKSYAESCWFGGNAK 295 + ++ Y K GI ++ GE FF +N+GDFW + ETRP++R+ Y + W Sbjct: 64 TSYKKKNEYYKKGIEVFRKKYGEKFFSENRGDFWEIFETRPFMRLSAGYGQLLWNNEKKD 123 Query: 296 EAAQILEHILELNTEDNTGARYLLAAVYLYSNQLKQAEQVLEKYGKDDAAAAFAYDRIIL 355 EA QI E +L+LN DN G RY L ++ NQL + ++L++Y + A F+ ++L Sbjct: 124 EAVQIYEELLQLNPNDNQGLRYTLINWFIDQNQLDKVTELLKEYQEGTAFMLFS--DLLL 181 Query: 356 EYKKNGITSQLKMLYRVARGVNKHVPDYLLGVKRLPHNLPDFVGMGDSNEAIEYVIMHSR 415 KK +++ Y A+ N +V YLL LP LPD+ G GD NEA+ Y Sbjct: 182 SIKKQESDTKILKKYIKAKNANPYVVKYLLKENELPEYLPDYYGFGDENEAVTYCFGSMD 241 Query: 416 LWASVPDLLK 425 +W D +K Sbjct: 242 VWLKDQDTIK 251 >Q1QL38.1 Q1QL38_NITHX Tetratricopeptide TPR_2 Length = 285 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 87/232 (37%), Positives = 138/232 (59%), Gaps = 4/232 (1%) Query: 182 AMLNGPGTPK--DKAQALLYMAMEASSSKRRIQLAETALEMYPDSSDAYLILAEES-DNE 238 AML G D AQ ++Y A EAS +RRI LA+ AL+ P +DAY++LA+E+ N Sbjct: 32 AMLGGTQQDDAVDAAQDIMYDAWEASDRRRRIALAKKALKTSPLCADAYVLLAQEAAQNP 91 Query: 239 QEARAYLKAGIAAGERELGELFFEKNKGDFWGLHETRPYIRICKSYAESCWFGGNAKEAA 298 EA + G+ AGE+ LG+ F+++ G FWGL ETRPY+R + A++ W + EA Sbjct: 92 DEAIDLYRQGVEAGEKVLGKASFQEDVGQFWGLLETRPYMRARRGLAQALWDKSHRDEAV 151 Query: 299 QILEHILELNTEDNTGARYLLAAVYLYSNQLKQAEQVLEKYGKDDAAAAFAYDRIILEYK 358 + +L+LN DN G RY+L L + +A ++E+Y +D +AA+++ R +LE++ Sbjct: 152 IHFQAMLDLNPNDNQGIRYVLLDCLLTLGRDHEAAGLIERY-SEDGSAAWSWSRALLEFR 210 Query: 359 KNGITSQLKMLYRVARGVNKHVPDYLLGVKRLPHNLPDFVGMGDSNEAIEYV 410 +NG ++ + A N+HV LLG +++P LP ++ G +EA+ YV Sbjct: 211 RNGDAAKSRAALSQAMSDNEHVAPLLLGDRKMPRRLPAYISWGGKDEAVAYV 262 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.132 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,402,648,439 Number of extensions: 95195315 Number of successful extensions: 261475 Number of sequences better than 1.0e-05: 49 Number of HSP's gapped: 261451 Number of HSP's successfully gapped: 49 Length of query: 430 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 291 Effective length of database: 1,751,175,118 Effective search space: 509591959338 Effective search space used: 509591959338 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)