BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0438.0004.p
         (148 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJ18.1 B3KJ18_9BACI Putative uncharacterized protein                157   4e-37
B1DHN4.1 B1DHN4_9BACL Putative uncharacterized protein                135   1e-30

>B3KJ18.1 B3KJ18_9BACI Putative uncharacterized protein
          Length = 145

 Score =  157 bits (396), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 95/132 (71%)

Query: 4   MHGKGMEMWGVYEPFHIMLNEYRVADIVITPHARSRFADRMNKEDGMDVDIGAWIWQCVK 63
           M  KG E W  YEPF+I LN+ +VADIVIT HA+SR+ DR+   D    +IG W+W+C+K
Sbjct: 1   MRDKGTERWSTYEPFYITLNDKKVADIVITNHAKSRYTDRVEGHDTSHEEIGTWMWECLK 60

Query: 64  QNRVRPYSQSEYNAYLIDNDTSVVVEFKELEGVTTLSGHPLYVMVVVTFLGNISVTPQLR 123
           Q+R+ PY ++E + YLID+D  VV EF ELE    L G+PL+ M++VTFLG +S T +LR
Sbjct: 61  QDRIVPYYRNEQDVYLIDDDLVVVAEFSELEHERDLIGNPLHRMIIVTFLGRMSETIELR 120

Query: 124 DLRGYFSWLHHS 135
           DL+ Y+SWL HS
Sbjct: 121 DLKSYYSWLRHS 132


>B1DHN4.1 B1DHN4_9BACL Putative uncharacterized protein
          Length = 145

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/132 (49%), Positives = 86/132 (65%)

Query: 4   MHGKGMEMWGVYEPFHIMLNEYRVADIVITPHARSRFADRMNKEDGMDVDIGAWIWQCVK 63
           M  K    W  YE F+I L + +VADIVIT HARSR+ DR+  E     DI  ++W+C+K
Sbjct: 1   MKDKTTRRWSTYETFYIELGDKKVADIVITNHARSRWVDRVETEKTGYEDIAEFLWECLK 60

Query: 64  QNRVRPYSQSEYNAYLIDNDTSVVVEFKELEGVTTLSGHPLYVMVVVTFLGNISVTPQLR 123
           Q R+ PY ++E + YLID+D   V EF   E    L G+PL+ M+VVTFLG +S T +LR
Sbjct: 61  QGRIEPYYRNEEDVYLIDDDLVFVAEFAPSETDIDLLGNPLHKMIVVTFLGRMSETIELR 120

Query: 124 DLRGYFSWLHHS 135
           DL+ Y+SWL HS
Sbjct: 121 DLKSYYSWLRHS 132


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.324    0.138    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 833,243,440
Number of extensions: 30357564
Number of successful extensions: 77903
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 77903
Number of HSP's successfully gapped: 2
Length of query: 148
Length of database: 3,060,696,203
Length adjustment: 110
Effective length of query: 38
Effective length of database: 2,024,384,553
Effective search space: 76926613014
Effective search space used: 76926613014
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 126 (53.1 bits)