BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0437.0030.p (177 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3BMH0.1 C3BMH0_9BACI NADPH oxidoreductase 177 5e-43 C3B5I3.1 C3B5I3_BACMY NADPH oxidoreductase 175 1e-42 C3AN49.1 C3AN49_BACMY NADPH oxidoreductase 174 3e-42 Q9EUW4.1 Q9EUW4_LISIN Putative NAD(P)H oxidoreductase 174 4e-42 Q92AM4.1 Q92AM4_LISIN Lin1898 protein 173 5e-42 >C3BMH0.1 C3BMH0_9BACI NADPH oxidoreductase Length = 176 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 88/173 (50%), Positives = 113/173 (65%), Gaps = 4/173 (2%) Query: 1 MKTLIILAHPNLEASRVNQRWKEELRQYPNDITVHELYKEYPDGNIDVPREQNLLEGYHH 60 MKTL+I+AHP++E SR+N+RW EEL +Y N+ITVHELYK P+ DV EQ LL + Sbjct: 1 MKTLVIVAHPDIEKSRINKRWIEELEKYSNEITVHELYKAAPNWEFDVDYEQRLLLEHDR 60 Query: 61 IILQFPLYWYSYPPLLKKWFDEVWTYGWAYXXXXXXXXXXXXXXAISIGDKQENYQPEGS 120 I QFPLYWYS PPLLKKWFD+V TYG+AY AISIG + Y+ Sbjct: 61 YIFQFPLYWYSSPPLLKKWFDDVLTYGFAYGSTGDKVRNKEFGLAISIGGLETQYKD--- 117 Query: 121 VSFTVDEVIAPFKASAGHVGAVALPYFAVFGASFQASDEDINHSAKEYINYIL 173 FT++E+ PF+A+ + G +P F ++GA +Q DEDI SA EYINYI+ Sbjct: 118 -GFTMNELTKPFQATCLYTGMKFIPTFTLYGAEYQLKDEDIERSAAEYINYIM 169 >C3B5I3.1 C3B5I3_BACMY NADPH oxidoreductase Length = 176 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/173 (50%), Positives = 112/173 (64%), Gaps = 4/173 (2%) Query: 1 MKTLIILAHPNLEASRVNQRWKEELRQYPNDITVHELYKEYPDGNIDVPREQNLLEGYHH 60 MKTL+I+AHP++E SR+N+RW EEL +Y N+ITVHELYK P+ DV EQ LL + Sbjct: 1 MKTLVIVAHPDIEKSRINKRWIEELEKYSNEITVHELYKAAPNWEFDVDYEQRLLLEHDR 60 Query: 61 IILQFPLYWYSYPPLLKKWFDEVWTYGWAYXXXXXXXXXXXXXXAISIGDKQENYQPEGS 120 I QFP YWYS PPLLKKWFD+V TYG+AY AISIG + Y+ Sbjct: 61 YIFQFPFYWYSSPPLLKKWFDDVLTYGFAYGSTGDKVRNKEFGLAISIGGLETQYKD--- 117 Query: 121 VSFTVDEVIAPFKASAGHVGAVALPYFAVFGASFQASDEDINHSAKEYINYIL 173 FT++E+ PF+A+ + G +P F ++GA +Q DEDI SA EYINYI+ Sbjct: 118 -GFTMNELTKPFQATCLYTGMKFIPTFTLYGAEYQLKDEDIERSAAEYINYIM 169 >C3AN49.1 C3AN49_BACMY NADPH oxidoreductase Length = 176 Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 86/173 (49%), Positives = 111/173 (64%), Gaps = 4/173 (2%) Query: 1 MKTLIILAHPNLEASRVNQRWKEELRQYPNDITVHELYKEYPDGNIDVPREQNLLEGYHH 60 MKTL+I+AHP++E SR+N+RW EEL +Y N+ITVHELYK P+ DV EQ LL + Sbjct: 1 MKTLVIVAHPDIEKSRINKRWIEELEKYSNEITVHELYKAAPNWEFDVDYEQRLLLEHDR 60 Query: 61 IILQFPLYWYSYPPLLKKWFDEVWTYGWAYXXXXXXXXXXXXXXAISIGDKQENYQPEGS 120 I QFP YWYS PPLLKKWFD+V TYG+AY AISIG + Y+ Sbjct: 61 YIFQFPFYWYSSPPLLKKWFDDVLTYGFAYGSTGDKVRNKEFGLAISIGGLETQYKD--- 117 Query: 121 VSFTVDEVIAPFKASAGHVGAVALPYFAVFGASFQASDEDINHSAKEYINYIL 173 FT++E+ PF+A+ + G +P F ++G +Q DEDI SA EYINYI+ Sbjct: 118 -GFTMNELTKPFQATCLYTGMKFIPTFTLYGTEYQLKDEDIERSAAEYINYIM 169 >Q9EUW4.1 Q9EUW4_LISIN Putative NAD(P)H oxidoreductase Length = 177 Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 79/174 (45%), Positives = 117/174 (67%) Query: 1 MKTLIILAHPNLEASRVNQRWKEELRQYPNDITVHELYKEYPDGNIDVPREQNLLEGYHH 60 MKTL+I+AHPN+E SRVN+ WKE L + ++ +HELY+ YP+ +IDV EQ L+ Y Sbjct: 1 MKTLVIIAHPNIENSRVNRVWKEALLKSTEEVAIHELYEVYPNWDIDVTFEQQQLQNYDK 60 Query: 61 IILQFPLYWYSYPPLLKKWFDEVWTYGWAYXXXXXXXXXXXXXXAISIGDKQENYQPEGS 120 +I+QFP YWYSYPPLLKKWFD+V++YGWAY A+SIGDK+ NY+ + Sbjct: 61 VIIQFPFYWYSYPPLLKKWFDDVFSYGWAYGSKGDKMAGKKLALAVSIGDKKYNYKEDAP 120 Query: 121 VSFTVDEVIAPFKASAGHVGAVALPYFAVFGASFQASDEDINHSAKEYINYILK 174 + +++D ++ PF+A+ H+ A ++G+SF+ +DE+I +A Y N +K Sbjct: 121 IGYSLDTLLTPFRATINHIRADYRGAHTIYGSSFEVTDEEIVENAYVYANKFIK 174 >Q92AM4.1 Q92AM4_LISIN Lin1898 protein Length = 177 Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 79/174 (45%), Positives = 117/174 (67%) Query: 1 MKTLIILAHPNLEASRVNQRWKEELRQYPNDITVHELYKEYPDGNIDVPREQNLLEGYHH 60 MKTL+I+AHPN+E SRVN+ WKE L + ++ +HELY+ YP+ +IDV EQ L+ Y Sbjct: 1 MKTLVIIAHPNIENSRVNRVWKEALLKSTEELAIHELYEVYPNWDIDVAFEQQQLQNYDK 60 Query: 61 IILQFPLYWYSYPPLLKKWFDEVWTYGWAYXXXXXXXXXXXXXXAISIGDKQENYQPEGS 120 +I+QFP YWYSYPPLLKKWFD+V++YGWAY A+SIGDK+ NY+ + Sbjct: 61 VIIQFPFYWYSYPPLLKKWFDDVFSYGWAYGSKGDKMAGKKLALAVSIGDKKYNYKEDAP 120 Query: 121 VSFTVDEVIAPFKASAGHVGAVALPYFAVFGASFQASDEDINHSAKEYINYILK 174 + +++D ++ PF+A+ H+ A ++G+SF+ +DE+I +A Y N +K Sbjct: 121 IDYSLDTLLTPFRATINHIRADYRGAHTIYGSSFEVTDEEIVENAYVYANKFIK 174 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,072,558,673 Number of extensions: 40073278 Number of successful extensions: 88012 Number of sequences better than 1.0e-05: 660 Number of HSP's gapped: 87652 Number of HSP's successfully gapped: 660 Length of query: 177 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 50 Effective length of database: 1,864,227,298 Effective search space: 93211364900 Effective search space used: 93211364900 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)