BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0437.0013.p (150 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C4IBI5.1 C4IBI5_CLOBU Acetyltransferase, GNAT family 167 2e-40 B1QW85.1 B1QW85_CLOBU Hypothetical acetyltransferase YjaB EC=2.3... 167 2e-40 Q181L9.1 Q181L9_CLOD6 Putative acetyltransferase 166 6e-40 B1Q6X7.1 B1Q6X7_CLOBO Acetyltransferase, GNAT family 157 2e-37 B1IH68.1 B1IH68_CLOBK Acetyltransferase, GNAT family 156 6e-37 >C4IBI5.1 C4IBI5_CLOBU Acetyltransferase, GNAT family Length = 147 Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 79/150 (52%), Positives = 110/150 (73%), Gaps = 4/150 (2%) Query: 1 VEHMNPIHRITDRNEEVSHQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLA 60 +++++ ++ ITD++ +L +WE++V+ATHLFLT+ +I +L P V +GI+ + HL Sbjct: 1 MKNIDVLNNITDKD---ITNILEVWESSVKATHLFLTQSDIISLKPFVEEGIKFVSHLAV 57 Query: 61 Y-TDSDHYLGFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAI 119 D D FIGV D KIEMLFV RG G+GK LVT+A+ TLNV +VDVNEQN Q + Sbjct: 58 LRDDEDTIQAFIGVHDNKIEMLFVKDTCRGLGLGKHLVTWAVNTLNVKFVDVNEQNDQGL 117 Query: 120 GFYEHLGFRVFDRSERDEQGQPFPILHMKL 149 GFY+++GF+VFDRSE DEQG PFPIL+M+L Sbjct: 118 GFYKYMGFKVFDRSELDEQGNPFPILYMRL 147 >B1QW85.1 B1QW85_CLOBU Hypothetical acetyltransferase YjaB EC=2.3.1.- Length = 147 Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 79/150 (52%), Positives = 110/150 (73%), Gaps = 4/150 (2%) Query: 1 VEHMNPIHRITDRNEEVSHQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLA 60 +++++ ++ ITD++ +L +WE++V+ATHLFLT+ +I +L P V +GI+ + HL Sbjct: 1 MKNIDVLNNITDKD---ITNILEVWESSVKATHLFLTQSDIISLKPFVEEGIKFVSHLAV 57 Query: 61 Y-TDSDHYLGFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAI 119 D D FIGV D KIEMLFV RG G+GK LVT+A+ TLNV +VDVNEQN Q + Sbjct: 58 LRDDEDTIQAFIGVHDNKIEMLFVKDTCRGLGLGKHLVTWAVNTLNVKFVDVNEQNDQGL 117 Query: 120 GFYEHLGFRVFDRSERDEQGQPFPILHMKL 149 GFY+++GF+VFDRSE DEQG PFPIL+M+L Sbjct: 118 GFYKYMGFKVFDRSELDEQGNPFPILYMRL 147 >Q181L9.1 Q181L9_CLOD6 Putative acetyltransferase Length = 149 Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 75/130 (57%), Positives = 99/130 (76%) Query: 20 QLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLAYTDSDHYLGFIGVQDTKIE 79 ++L +WE++VRATH FLTE++I +L PLV G++++ +++ D++ GFIG+ KIE Sbjct: 19 EMLQVWESSVRATHDFLTEKDIESLIPLVEIGLKEVENIVCIKDNEIIKGFIGIDKDKIE 78 Query: 80 MLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAIGFYEHLGFRVFDRSERDEQG 139 MLF+ RG GIGK+L+ YAI NV YVDVNEQN +A+GFY HLGF+VFDRSE D QG Sbjct: 79 MLFIEDKYRGNGIGKKLIKYAIDKYNVKYVDVNEQNKKAVGFYIHLGFKVFDRSEIDGQG 138 Query: 140 QPFPILHMKL 149 PFPILHMKL Sbjct: 139 NPFPILHMKL 148 >B1Q6X7.1 B1Q6X7_CLOBO Acetyltransferase, GNAT family Length = 148 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 73/147 (49%), Positives = 98/147 (66%), Gaps = 1/147 (0%) Query: 4 MNPIHRITDRNEEVSHQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLAYTD 63 M I + + NE+ +L +WE++VRATH FL E++I ++ P V +G+ + LL D Sbjct: 1 MIKIENLNNINEKDMDNILKVWESSVRATHTFLKEEDIISIKPQVKEGVDYVSKLLCVRD 60 Query: 64 SDHYL-GFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAIGFY 122 + F+GV D+KIEMLFV+ RG GIGK+L+ YAI LN +VDVNEQN Q +GFY Sbjct: 61 EKGTIQAFMGVHDSKIEMLFVDSNNRGNGIGKKLINYAINVLNAKFVDVNEQNTQGVGFY 120 Query: 123 EHLGFRVFDRSERDEQGQPFPILHMKL 149 +H+GF F RSE D+ G PFPILHMK Sbjct: 121 KHMGFDTFKRSEFDDHGNPFPILHMKF 147 >B1IH68.1 B1IH68_CLOBK Acetyltransferase, GNAT family Length = 148 Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 1/147 (0%) Query: 4 MNPIHRITDRNEEVSHQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLAYTD 63 M I + + N++ +L +WE++VRATH FL E++I ++ P V +G+ + LL D Sbjct: 1 MIKIENLNNINKDDMDNILNVWESSVRATHTFLKEEDIISIKPQVKEGVDYVSKLLCVRD 60 Query: 64 SDHYL-GFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAIGFY 122 + F+GV D+KIEMLFV+ RG GIGK+L+ YAI LN +VDVNEQN Q +GFY Sbjct: 61 QKGTIQAFMGVHDSKIEMLFVDSKNRGNGIGKKLINYAINVLNAKFVDVNEQNTQGVGFY 120 Query: 123 EHLGFRVFDRSERDEQGQPFPILHMKL 149 +H+GF F RSE D+ G PFPILHMK Sbjct: 121 KHMGFDTFKRSEFDDHGNPFPILHMKF 147 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.140 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 887,185,585 Number of extensions: 32970016 Number of successful extensions: 81502 Number of sequences better than 1.0e-05: 376 Number of HSP's gapped: 81818 Number of HSP's successfully gapped: 378 Length of query: 150 Length of database: 3,060,696,203 Length adjustment: 112 Effective length of query: 38 Effective length of database: 2,005,542,523 Effective search space: 76210615874 Effective search space used: 76210615874 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 126 (53.1 bits)