BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0435.0014.p (139 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0XHB3.1 C0XHB3_LACHI Cupin superfamily protein 218 1e-55 C2D3B6.1 C2D3B6_LACBR Cupin superfamily protein 217 3e-55 C0WS28.1 C0WS28_LACBU Cupin superfamily protein 213 5e-54 Q03DL8.1 Q03DL8_PEDPA Double-stranded beta-helix related protein 213 5e-54 C2HC13.1 C2HC13_ENTFC Cupin superfamily protein 206 5e-52 >C0XHB3.1 C0XHB3_LACHI Cupin superfamily protein Length = 138 Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/126 (80%), Positives = 112/126 (88%) Query: 1 VAKHDEVKNGIIFPVGEKNEAFAQYFVGQSYLSTLVADPNVNVGVGNVTFEPGCRNNWHI 60 +AK++ +KNG+IFP G KNEAFA+YFVGQSYL LV DP VNV VGNVTFEPGCRNNWHI Sbjct: 2 MAKNESIKNGVIFPAGPKNEAFAKYFVGQSYLQGLVNDPEVNVNVGNVTFEPGCRNNWHI 61 Query: 61 HRNGFQLLMVTGGEGWYQEEGKPAQFLKAGDVVVTQDGVKHWHGASKDSWFEHIAITAGR 120 H +GFQ+L+VTGGEGWYQEEGKPAQ L GDVVVT DGVKHWHGA+KDSWFEHIAITAG Sbjct: 62 HHDGFQILLVTGGEGWYQEEGKPAQHLVPGDVVVTHDGVKHWHGATKDSWFEHIAITAGT 121 Query: 121 PEWLEP 126 PEWLEP Sbjct: 122 PEWLEP 127 >C2D3B6.1 C2D3B6_LACBR Cupin superfamily protein Length = 138 Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 101/126 (80%), Positives = 112/126 (88%) Query: 1 VAKHDEVKNGIIFPVGEKNEAFAQYFVGQSYLSTLVADPNVNVGVGNVTFEPGCRNNWHI 60 +AK++ +KNG+IFP G KNEAFA+YFVGQSYL LV DP+VNV V NVTFEPGCRNNWHI Sbjct: 2 MAKNESIKNGVIFPAGPKNEAFAKYFVGQSYLQGLVNDPDVNVNVSNVTFEPGCRNNWHI 61 Query: 61 HRNGFQLLMVTGGEGWYQEEGKPAQFLKAGDVVVTQDGVKHWHGASKDSWFEHIAITAGR 120 H +GFQ+L+VTGGEGWYQEEGKPAQ L GDVVVT DGVKHWHGA+KDSWFEHIAITAG Sbjct: 62 HHDGFQILLVTGGEGWYQEEGKPAQHLVPGDVVVTHDGVKHWHGATKDSWFEHIAITAGT 121 Query: 121 PEWLEP 126 PEWLEP Sbjct: 122 PEWLEP 127 >C0WS28.1 C0WS28_LACBU Cupin superfamily protein Length = 138 Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 99/126 (78%), Positives = 110/126 (87%) Query: 1 VAKHDEVKNGIIFPVGEKNEAFAQYFVGQSYLSTLVADPNVNVGVGNVTFEPGCRNNWHI 60 + K++ +KNG+IFP G KNEAFA+YFVGQSYL LV DP+VNV VGNVTFEPGCRNNWH Sbjct: 2 MVKNESIKNGVIFPAGPKNEAFAKYFVGQSYLQGLVNDPDVNVNVGNVTFEPGCRNNWHT 61 Query: 61 HRNGFQLLMVTGGEGWYQEEGKPAQFLKAGDVVVTQDGVKHWHGASKDSWFEHIAITAGR 120 H +GFQ+L+VTGGEGWYQEEGKPAQ L GDVVVT DG KHWHGA+KDSWFEHIAITAG Sbjct: 62 HHDGFQILLVTGGEGWYQEEGKPAQHLVPGDVVVTHDGDKHWHGATKDSWFEHIAITAGT 121 Query: 121 PEWLEP 126 PEWLEP Sbjct: 122 PEWLEP 127 >Q03DL8.1 Q03DL8_PEDPA Double-stranded beta-helix related protein Length = 138 Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 97/123 (78%), Positives = 111/123 (90%) Query: 3 KHDEVKNGIIFPVGEKNEAFAQYFVGQSYLSTLVADPNVNVGVGNVTFEPGCRNNWHIHR 62 K++ VKNG+IFP G KN+A+A+YFVGQSYL LV+DP VNVGVGNVTFEPGCRNNWHIH Sbjct: 2 KNEAVKNGVIFPAGPKNDAYAKYFVGQSYLQGLVSDPEVNVGVGNVTFEPGCRNNWHIHH 61 Query: 63 NGFQLLMVTGGEGWYQEEGKPAQFLKAGDVVVTQDGVKHWHGASKDSWFEHIAITAGRPE 122 +GFQ+L+VTGGEGWYQEEG+PA+ L AGDVVVT DGVKHWHGA+KDSWF H+AITAG PE Sbjct: 62 DGFQILLVTGGEGWYQEEGQPARHLTAGDVVVTHDGVKHWHGATKDSWFAHVAITAGTPE 121 Query: 123 WLE 125 WLE Sbjct: 122 WLE 124 >C2HC13.1 C2HC13_ENTFC Cupin superfamily protein Length = 139 Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 91/126 (72%), Positives = 111/126 (88%) Query: 1 VAKHDEVKNGIIFPVGEKNEAFAQYFVGQSYLSTLVADPNVNVGVGNVTFEPGCRNNWHI 60 + KH+E++ G+IFP GEKNEA+AQ F GQSYL+ LV DP ++VGVGNVTFEPGCRN+WH+ Sbjct: 2 MTKHEEIQKGVIFPAGEKNEAYAQVFTGQSYLNMLVNDPEISVGVGNVTFEPGCRNHWHV 61 Query: 61 HRNGFQLLMVTGGEGWYQEEGKPAQFLKAGDVVVTQDGVKHWHGASKDSWFEHIAITAGR 120 H +G+Q+L+VTGGEGWYQEEGKPA+ L AGDVVVT G+KHWHGA+KDSWFEH+AITAG Sbjct: 62 HTDGYQILLVTGGEGWYQEEGKPARRLMAGDVVVTHKGIKHWHGATKDSWFEHLAITAGN 121 Query: 121 PEWLEP 126 E+LEP Sbjct: 122 SEFLEP 127 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.137 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 934,932,001 Number of extensions: 39045413 Number of successful extensions: 70990 Number of sequences better than 1.0e-05: 482 Number of HSP's gapped: 70488 Number of HSP's successfully gapped: 483 Length of query: 139 Length of database: 3,060,696,203 Length adjustment: 103 Effective length of query: 36 Effective length of database: 2,090,331,658 Effective search space: 75251939688 Effective search space used: 75251939688 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 125 (52.8 bits)