BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0435.0012.p (195 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1C417.1 B1C417_9FIRM Putative uncharacterized protein 289 1e-76 C0BWZ8.1 C0BWZ8_9CLOT Putative uncharacterized protein 280 7e-74 C1TR81.1 C1TR81_9BACT Aldo/keto reductase, diketogulonate reductase 274 2e-72 A7GVV6.1 A7GVV6_CAMC5 Probable oxidoreductase W EC=1.-.-.- 268 2e-70 C0FF95.1 C0FF95_9CLOT Putative uncharacterized protein 266 6e-70 >B1C417.1 B1C417_9FIRM Putative uncharacterized protein Length = 291 Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 129/192 (67%), Positives = 166/192 (86%) Query: 4 AVSIGYRHIDTAQAYGNEAGVGEAIRICGIAREELFITTKVAAELKKFDAVTQSIDESLA 63 A+ +GYRHIDTAQAYGNE GVG+AIR IAR++LFIT+KVAAE K + SI+E+L Sbjct: 36 ALEVGYRHIDTAQAYGNEEGVGKAIRKSNIARQDLFITSKVAAEAKTYQEAYDSINETLN 95 Query: 64 KLGLEYIDLLIIHSPQPWKEFRGENRYFEENKEVWKAMEAAYKAGKVKAIGLSNFLEDDV 123 K+GL+Y+DL+IIHSPQPW+EFR +NRYF+ENKEVWKA+E AY+ GKVKAIG+SNFL+DD+ Sbjct: 96 KMGLDYLDLMIIHSPQPWQEFRDDNRYFKENKEVWKALETAYQEGKVKAIGVSNFLKDDL 155 Query: 124 EDILSSCEVKPMVNQILAHVSNTPMPLIEFCRKHDILVEAYSPIVHGAILDHAEVKAIAD 183 E+IL+SC++KPMVNQIL H+SNT LI+FC+++DILVEAYSPI HGAIL + + A+A+ Sbjct: 156 ENILNSCQIKPMVNQILTHISNTKTELIKFCKENDILVEAYSPIAHGAILKNENIIAMAN 215 Query: 184 QYGVSVAQLCLR 195 +Y VSVA+LC+R Sbjct: 216 KYNVSVARLCIR 227 >C0BWZ8.1 C0BWZ8_9CLOT Putative uncharacterized protein Length = 282 Score = 280 bits (715), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 125/195 (64%), Positives = 160/195 (82%) Query: 1 VRDAVSIGYRHIDTAQAYGNEAGVGEAIRICGIAREELFITTKVAAELKKFDAVTQSIDE 60 V AV IGYRHIDTAQAYGNE GVG I+ CGI REELF+T+KVAAE K +DA +SID+ Sbjct: 31 VISAVKIGYRHIDTAQAYGNERGVGTGIKACGIPREELFVTSKVAAEAKTYDAAAKSIDK 90 Query: 61 SLAKLGLEYIDLLIIHSPQPWKEFRGENRYFEENKEVWKAMEAAYKAGKVKAIGLSNFLE 120 +L K+GL YIDL++IHSPQPW E+RG RYFEEN +VWKA+E AY AGK+KAIG+SNFL Sbjct: 91 TLDKMGLTYIDLMLIHSPQPWAEWRGGKRYFEENIQVWKALEDAYTAGKIKAIGVSNFLI 150 Query: 121 DDVEDILSSCEVKPMVNQILAHVSNTPMPLIEFCRKHDILVEAYSPIVHGAILDHAEVKA 180 DD++++L+ CE+KPMVNQ+L H+ NTP LI+FC++ +I+VEAYSPI HG L + + A Sbjct: 151 DDLDNLLAHCEIKPMVNQLLIHIGNTPTELIDFCKQQNIVVEAYSPIAHGEALKNETIVA 210 Query: 181 IADQYGVSVAQLCLR 195 +A++YGVSV QLC++ Sbjct: 211 MANKYGVSVPQLCIK 225 >C1TR81.1 C1TR81_9BACT Aldo/keto reductase, diketogulonate reductase Length = 286 Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 121/195 (62%), Positives = 159/195 (81%) Query: 1 VRDAVSIGYRHIDTAQAYGNEAGVGEAIRICGIAREELFITTKVAAELKKFDAVTQSIDE 60 VR AV +GYRH+DTAQAY NEAGV ++ CGI RE+LF+T+KVAAE K ++ SIDE Sbjct: 34 VRQAVELGYRHMDTAQAYENEAGVAAGVKSCGIEREKLFVTSKVAAEHKTYETAASSIDE 93 Query: 61 SLAKLGLEYIDLLIIHSPQPWKEFRGENRYFEENKEVWKAMEAAYKAGKVKAIGLSNFLE 120 +L+++GL+Y+D++IIHSPQPW EFR E RY+EENK VW+A+E Y+AGK+KAIG+SNFL Sbjct: 94 TLSRMGLDYLDMMIIHSPQPWNEFRDEKRYYEENKAVWRALEDGYRAGKLKAIGVSNFLV 153 Query: 121 DDVEDILSSCEVKPMVNQILAHVSNTPMPLIEFCRKHDILVEAYSPIVHGAILDHAEVKA 180 DD+E +L+ C VKPMVNQILAH+ NTP L+ FC K+DILVEAY+PI HG L + E+ A Sbjct: 154 DDLESLLADCTVKPMVNQILAHIGNTPEELMAFCEKNDILVEAYAPIAHGVALWNRELVA 213 Query: 181 IADQYGVSVAQLCLR 195 IA++YG++V QLC++ Sbjct: 214 IAEKYGITVPQLCIK 228 >A7GVV6.1 A7GVV6_CAMC5 Probable oxidoreductase W EC=1.-.-.- Length = 302 Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 119/195 (61%), Positives = 158/195 (81%) Query: 1 VRDAVSIGYRHIDTAQAYGNEAGVGEAIRICGIAREELFITTKVAAELKKFDAVTQSIDE 60 V +A+++GYRHIDTA+AYGNE GVGE +R C +AREE+F+TTK+ AE+K ++ +IDE Sbjct: 36 VHEAINLGYRHIDTAEAYGNERGVGEGVRTCAVAREEIFVTTKLRAEIKDYETAVAAIDE 95 Query: 61 SLAKLGLEYIDLLIIHSPQPWKEFRGENRYFEENKEVWKAMEAAYKAGKVKAIGLSNFLE 120 SL KLGL YIDL+IIHSPQPW +FR +FE N W+A+EAAYKAGK++AIG+SNF Sbjct: 96 SLQKLGLSYIDLMIIHSPQPWTDFREGEHFFEGNIAAWRALEAAYKAGKLRAIGVSNFEC 155 Query: 121 DDVEDILSSCEVKPMVNQILAHVSNTPMPLIEFCRKHDILVEAYSPIVHGAILDHAEVKA 180 D+E+I ++CE+KPMVNQ+L+H+ NTP LI++C+K IL+EAYSP+ HGAIL +A+V Sbjct: 156 IDIENITANCEIKPMVNQVLSHIGNTPFELIDYCQKAGILIEAYSPVAHGAILQNAQVAD 215 Query: 181 IADQYGVSVAQLCLR 195 IA YGVSVA+LC+R Sbjct: 216 IAKGYGVSVARLCVR 230 >C0FF95.1 C0FF95_9CLOT Putative uncharacterized protein Length = 288 Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 118/196 (60%), Positives = 163/196 (83%), Gaps = 1/196 (0%) Query: 1 VRDAVSIGYRHIDTAQAYGNEAGVGEAIRICGIAREELFITTKVAAELKKFDAVTQSIDE 60 VRDAV GYRHIDTAQAYGNE GVGE + CG++R+E+F+TTK+AAE+K ++ ++ID Sbjct: 34 VRDAVGAGYRHIDTAQAYGNERGVGEGVNTCGLSRQEIFVTTKLAAEIKTYEEAVEAIDA 93 Query: 61 SLAKLGLEYIDLLIIHSPQPWKEFRGENRYFEE-NKEVWKAMEAAYKAGKVKAIGLSNFL 119 SL K+GL+YIDL++IHSPQPW +FR + R F+E N++ WKAME AY AGK+KAIG+SNF Sbjct: 94 SLEKMGLDYIDLMLIHSPQPWTQFREDVRSFDEGNRQAWKAMEDAYHAGKLKAIGVSNFE 153 Query: 120 EDDVEDILSSCEVKPMVNQILAHVSNTPMPLIEFCRKHDILVEAYSPIVHGAILDHAEVK 179 ++D+E++LS+C VKPMVNQ+L H+SNTP LI + + ++ILVEAYSPI HG +L + +++ Sbjct: 154 KEDLENLLSTCTVKPMVNQLLVHISNTPAELIAYNQANEILVEAYSPIGHGEVLKNPKIQ 213 Query: 180 AIADQYGVSVAQLCLR 195 A+A++YGVS A+LC+R Sbjct: 214 AMAEKYGVSAARLCIR 229 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,116,481,497 Number of extensions: 43552876 Number of successful extensions: 146637 Number of sequences better than 1.0e-05: 4665 Number of HSP's gapped: 140341 Number of HSP's successfully gapped: 4692 Length of query: 195 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 67 Effective length of database: 1,854,806,283 Effective search space: 124272020961 Effective search space used: 124272020961 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)