BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0434.0022.p
         (159 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C2W7X4.1 C2W7X4_BACCE Putative uncharacterized protein                124   2e-27
C3BTL4.1 C3BTL4_9BACI Putative uncharacterized protein                118   2e-25
C3B3I3.1 C3B3I3_BACMY Putative uncharacterized protein                118   2e-25
C3ALJ8.1 C3ALJ8_BACMY Putative uncharacterized protein                118   2e-25
C3IJD2.1 C3IJD2_BACTU Putative uncharacterized protein                116   5e-25

>C2W7X4.1 C2W7X4_BACCE Putative uncharacterized protein
          Length = 254

 Score =  124 bits (312), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 83/128 (64%), Gaps = 2/128 (1%)

Query: 1   MMRQHEHGLLAGKFAERFKEQHVPAEGRRAEVLRAVSQHDRGWIDLDETPFWNDAEGAPY 60
           ++RQH+HGLLAG+FA++F++          E + A+ QHD+GWI LD+TP WNDA+  PY
Sbjct: 12  LIRQHDHGLLAGEFAKKFRKDFFEETAYLNECVDAIDQHDKGWIGLDKTPIWNDAKNVPY 71

Query: 61  TFIDFPLVPKLTFYRRGLDEIEADTPYGALLCSSHYERLIEISGEDCPELTAYLKHEEDR 120
           +F+D P   +  FY  GL+EIE   PYGA+LCS H+     ++ +D PE+ ++ K E DR
Sbjct: 72  SFMDCPSSLRFVFYSIGLNEIENSNPYGAMLCSKHFTSF-PLNPKD-PEMVSFYKQELDR 129

Query: 121 XXXXVSTV 128
               + T+
Sbjct: 130 QKKFLKTL 137


>C3BTL4.1 C3BTL4_9BACI Putative uncharacterized protein
          Length = 254

 Score =  118 bits (295), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 81/128 (63%), Gaps = 2/128 (1%)

Query: 1   MMRQHEHGLLAGKFAERFKEQHVPAEGRRAEVLRAVSQHDRGWIDLDETPFWNDAEGAPY 60
           ++RQH+HG LAG+FA++F++     +    E + A+ +HDRGWI LD TP WNDA+ +PY
Sbjct: 12  VIRQHDHGFLAGEFAKKFRKDVFEDKTYLKECIDAIYEHDRGWIGLDTTPIWNDAKNSPY 71

Query: 61  TFIDFPLVPKLTFYRRGLDEIEADTPYGALLCSSHYERLIEISGEDCPELTAYLKHEEDR 120
           TF+D P   +  FY  GL+EIE   PYGA+LCS H+     ++ ED  E+  + K E DR
Sbjct: 72  TFMDCPSSLRFVFYTLGLNEIEHTNPYGAILCSKHFISF-PLNQED-DEMIKFYKQELDR 129

Query: 121 XXXXVSTV 128
               + T+
Sbjct: 130 QKKFLKTL 137


>C3B3I3.1 C3B3I3_BACMY Putative uncharacterized protein
          Length = 254

 Score =  118 bits (295), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 81/128 (63%), Gaps = 2/128 (1%)

Query: 1   MMRQHEHGLLAGKFAERFKEQHVPAEGRRAEVLRAVSQHDRGWIDLDETPFWNDAEGAPY 60
           ++RQH+HG LAG+FA++F++     +    E + A+ +HDRGWI LD TP WNDA+ +PY
Sbjct: 12  VIRQHDHGFLAGEFAKKFRKDVFEDKTYLKECIDAIYEHDRGWIGLDTTPIWNDAKNSPY 71

Query: 61  TFIDFPLVPKLTFYRRGLDEIEADTPYGALLCSSHYERLIEISGEDCPELTAYLKHEEDR 120
           TF+D P   +  FY  GL+EIE   PYGA+LCS H+     ++ ED  E+  + K E DR
Sbjct: 72  TFMDCPSSLRFVFYTLGLNEIEHTNPYGAILCSKHFISF-PLNQED-DEMIKFYKQELDR 129

Query: 121 XXXXVSTV 128
               + T+
Sbjct: 130 QKKFLKTL 137


>C3ALJ8.1 C3ALJ8_BACMY Putative uncharacterized protein
          Length = 254

 Score =  118 bits (295), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 81/128 (63%), Gaps = 2/128 (1%)

Query: 1   MMRQHEHGLLAGKFAERFKEQHVPAEGRRAEVLRAVSQHDRGWIDLDETPFWNDAEGAPY 60
           ++RQH+HG LAG+FA++F++     +    E + A+ +HDRGWI LD TP WNDA+ +PY
Sbjct: 12  VIRQHDHGFLAGEFAKKFRKDVFEDKTYLKECIDAIYEHDRGWIGLDTTPIWNDAKNSPY 71

Query: 61  TFIDFPLVPKLTFYRRGLDEIEADTPYGALLCSSHYERLIEISGEDCPELTAYLKHEEDR 120
           TF+D P   +  FY  GL+EIE   PYGA+LCS H+     ++ ED  E+  + K E DR
Sbjct: 72  TFMDCPSSLRFVFYTLGLNEIEHTNPYGAILCSKHFISF-PLNQED-DEMIKFYKQELDR 129

Query: 121 XXXXVSTV 128
               + T+
Sbjct: 130 QKKFLKTL 137


>C3IJD2.1 C3IJD2_BACTU Putative uncharacterized protein
          Length = 270

 Score =  116 bits (291), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 7/139 (5%)

Query: 1   MMRQHEHGLLAGKFAERFKEQHVPAEGRRAEVLRAVSQHDRGWIDLDETPFWNDAEGAPY 60
           ++RQH+HG LAG+ A+  KE     +    E + A+ +HDRGWI+LD+ P  NDA+  PY
Sbjct: 28  LIRQHDHGFLAGEIAKHIKEDFFEGKTYLKETVDAIYEHDRGWIELDKVPILNDAKNIPY 87

Query: 61  TFIDFPLVPKLTFYRRGLDEIEADTPYGALLCSSHYERLIEISGEDCPELTAYLKHEEDR 120
           TF+D P   +  FY  GL+EIE   PYGALLCS H+  L     E+  E+ ++ KHE +R
Sbjct: 88  TFMDCPSPLRFVFYTIGLNEIENSNPYGALLCSKHF--LSFPLNEEDEEMMSFYKHELER 145

Query: 121 XXXXVSTVIWRTATRSQRA 139
                   I +T+T+ Q A
Sbjct: 146 QKR-----ILKTSTKEQFA 159


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.135    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 939,455,523
Number of extensions: 37245243
Number of successful extensions: 68539
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 68537
Number of HSP's successfully gapped: 82
Length of query: 159
Length of database: 3,060,696,203
Length adjustment: 120
Effective length of query: 39
Effective length of database: 1,930,174,403
Effective search space: 75276801717
Effective search space used: 75276801717
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)