BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0430.0001.p (346 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3DER1.1 C3DER1_BACTS Acyltransferase 3 166 4e-39 A7GQP6.1 A7GQP6_BACCN Acyltransferase 3 159 3e-37 C2W9W1.1 C2W9W1_BACCE Acyltransferase 3 159 3e-37 B5QKM2.1 B5QKM2_LACRH Acyltransferase 3 112 6e-23 C2JZA1.1 C2JZA1_LACRH Acyltransferase 3 112 8e-23 >C3DER1.1 C3DER1_BACTS Acyltransferase 3 Length = 350 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 109/300 (36%), Positives = 160/300 (53%), Gaps = 13/300 (4%) Query: 4 QRELWIDAAKGFSIIFVVMGHSGDAAANHYLSWFRMPLFFILSGLVFKPVDSCRYLGWAA 63 +RE W+D AKG +II VV GHSG+ +HYL WF MPLFF++SG +FK V W+ Sbjct: 13 ERERWLDIAKGIAIIAVVFGHSGEKLFSHYLFWFHMPLFFLVSGYLFKSVKG-DIRSWSF 71 Query: 64 KRTKGLMTPYAAYG-MLIATVLLLFSFNFRDFAENIARLLYGGLSLTGPYGVFWFITCLL 122 ++K L+ PY ++G +++ +L + N + + A L+YGG +L G +G FWFITCLL Sbjct: 72 NKSKKLLIPYFSFGILILLISFILITPNVMNSLKQAAGLVYGGRALKGIFGPFWFITCLL 131 Query: 123 FTQLLFGYIVR--YPMRTQLLLITAAYXXXXXXXXXXX----XXFNLPWNIDVSLLAVTY 176 TQ+ FG I ++ +++ I + Y +PW ID+S +A+TY Sbjct: 132 LTQITFGIIQTKLKSIKVKVVFIASLYVLAHAVTYFLSKKDGIQIPVPWAIDISFVALTY 191 Query: 177 YAVGYYGKKXXXXXXXXXXXXXXXXXXXXGVFALERAGMIHYSLNMKYKEYDAVVLDLFI 236 Y++GYY K L+ G I+Y L+MKY Y+ +LDL I Sbjct: 192 YSMGYYLKDIIRKCVSTVYIGLSFLILSAVFITLDYKGFIYYKLDMKYSIYNNFLLDLII 251 Query: 237 PLLVSLTICAGVYWLSRHFQLQWLGNLGRNTIAIMYLHLPVN-YALKYLVGADYGLVPFT 295 P + ++I Y L + L L LG +++IMYLH+ VN A +YL Y V FT Sbjct: 252 PFALVISILFISYHLEK-LSLPLLSYLGTRSLSIMYLHIVVNAVAKQYLT---YNFVVFT 307 >A7GQP6.1 A7GQP6_BACCN Acyltransferase 3 Length = 352 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 111/317 (35%), Positives = 167/317 (52%), Gaps = 31/317 (9%) Query: 1 VNKQRELWIDAAKGFSIIFVVMGHSGDAAANH-----YLSWFRMPLFFILSGLVFKPVDS 55 ++K+ ELW+D+AKGF++I VV GH A NH Y+ WF MP FF+ SG V KPV Sbjct: 2 IDKKHELWLDSAKGFALILVVAGH----AYNHNNLITYIYWFHMPAFFLFSGYVSKPVKQ 57 Query: 56 CRYLG-WAAKRTKGLMTPYAAYGMLIATV-----LLLFSFNFRDFAENIARLLYGGLSLT 109 +G + KR L+ PY Y L + L+ + +F + E+I ++L+GG ++ Sbjct: 58 WSQVGPYLKKRAHSLLIPYITYLGLFTMIRYAEELMQGNSSFHWYIEDIGKVLFGGRFIS 117 Query: 110 GPYGVFWFITCLLFTQLLF--GYIVRYPMRTQLLLITAAYXXXXXXXXXXXXXFNL---- 163 YGVFWFITCL FTQ+LF +++ T+LL I Y L Sbjct: 118 SYYGVFWFITCLFFTQVLFLIIFLIFKRTHTRLLFIAFLYIISHIEGRYISTLGGLEPSL 177 Query: 164 ----PWNIDVSLLAVTYYAVGYYGKKXXXXXXXXXXXXXXXXXXXXGVFALERAGMIHYS 219 PWNIDVS+LA+ YY++GYY K G+ ++ ++ Y Sbjct: 178 HVWIPWNIDVSMLALVYYSIGYYIKP--YLKQIPPVLTGLCTLLIMGLITIQELNLLDYH 235 Query: 220 LNMKYKEYDAVVLDLFIPLLVSLTICAGVYWLSRHFQLQWLGNLGRN-TIAIMYLHLPVN 278 L+MKY Y+ LD+ IPL++++ C G++ L + ++ L + N ++AIMY+H+ VN Sbjct: 236 LSMKYVSYNHYSLDIVIPLIMTIAYC-GIFQLIKSKKVLSLCSFMNNKSMAIMYMHIGVN 294 Query: 279 YALKYLVGADYGLVPFT 295 L L DYG + +T Sbjct: 295 KIL--LEFIDYGNIIYT 309 >C2W9W1.1 C2W9W1_BACCE Acyltransferase 3 Length = 363 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 110/317 (34%), Positives = 167/317 (52%), Gaps = 31/317 (9%) Query: 1 VNKQRELWIDAAKGFSIIFVVMGHSGDAAANH-----YLSWFRMPLFFILSGLVFKPVDS 55 ++K+RELW+D AKGF++I VV GH NH Y+ WF MP FF+ SG V KPV+ Sbjct: 12 MDKKRELWLDGAKGFAMILVVAGH----VYNHNNLITYIYWFHMPAFFLFSGYVSKPVER 67 Query: 56 CRYLG-WAAKRTKGLMTPYAAYGMLI-----ATVLLLFSFNFRDFAENIARLLYGGLSLT 109 +G + +R L+ PY Y L A L+ + + + E+I ++++GG +T Sbjct: 68 WSQVGPYLKRRAHSLLIPYITYLGLFTLIRYAEELIQGNISLNWYIEDIEKIIFGGRFIT 127 Query: 110 GPYGVFWFITCLLFTQLLF--GYIVRYPMRTQLLLITAAYXXXXXXXXXXXXXFNL---- 163 YGVFWF+TCL FTQ+LF +++ +T+LL I Y L Sbjct: 128 SYYGVFWFVTCLFFTQVLFLIIFLIFKRTKTRLLFIMLLYIVSHIEGSYIGTLSGLEPSL 187 Query: 164 ----PWNIDVSLLAVTYYAVGYYGKKXXXXXXXXXXXXXXXXXXXXGVFALERAGMIHYS 219 PWNIDVS+LA+ YY++GYY K G ++ ++ Y Sbjct: 188 HVWIPWNIDVSMLALVYYSIGYYVKP--YVKQIPSVLTALCILLIIGFITIQELNLMDYH 245 Query: 220 LNMKYKEYDAVVLDLFIPLLVSLTICAGVYWLSRHFQLQWLGNLGRN-TIAIMYLHLPVN 278 L+MKY Y+ LD+ IPL++++ C G++ L + ++ L +L N ++AIMY+H+ VN Sbjct: 246 LSMKYVSYEHYGLDVVIPLVMTIAYC-GIFQLIKSVKILSLFSLINNKSMAIMYMHIGVN 304 Query: 279 YALKYLVGADYGLVPFT 295 L L DYG + +T Sbjct: 305 KIL--LQFMDYGNITYT 319 >B5QKM2.1 B5QKM2_LACRH Acyltransferase 3 Length = 333 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Query: 2 NKQRELWIDAAKGFSIIFVVMGHSGDAAANHYLS--WFRMPLFFILSGLVFKPVDSCRYL 59 + QR WID AKG II VV+GH Y S W+ MPLFF++ G KP Sbjct: 6 SHQRIEWIDVAKGLGIIAVVLGHFYPRNTTFYESLYWWHMPLFFMIGGFFVKPTTLPTLK 65 Query: 60 GWAAKRTKGLMTPYAAYGMLIATVLLLFSFNFRDFA---ENIARLLYGGLSLTGPYGVFW 116 + A+R L+ Y YG + +LL F R A + + RL+YGG L G VFW Sbjct: 66 AFLARRFWPLLKQYFGYG--VGLILLNFIIEQRTPAFTVDYLRRLIYGGTELNGYLSVFW 123 Query: 117 FITCLLFTQLLFGYIVRYPMRT---QLLLITAAYXXXXXXXXXXXXXFNLPWNIDVSLLA 173 F+T F+ LLF + Y + +L+ + F +P N+D+ L+A Sbjct: 124 FVTVYAFSSLLFSLLRGYLPKVWHEAILMAGLFWLGFSYPNAETVLGFPIPGNLDLVLVA 183 Query: 174 VTYYAVGYYGKKXXXXXXXXXXXXXXXXXXXXGVFALERAGMIHYSLNMKYKEYDAVVLD 233 + Y VG++ G+F + G I + L MK +L Sbjct: 184 LPYMFVGWWLFHYARHIVTQPWFMLVALGVFAGLFVAQSRGQIDFLLYMKSHHLTDPLLA 243 Query: 234 LFIPLLVSLTICAGVYWLSRHFQLQWLGNLGRNTIAIMYLHLPVNYALKYL 284 F+P+++ + AG L+ WL +GR+T+ IMY H V Y L+ L Sbjct: 244 SFVPVIICGGLFAGAKTLTGTVLGDWLDRIGRSTLPIMYGHKAVGYVLEKL 294 >C2JZA1.1 C2JZA1_LACRH Acyltransferase 3 Length = 333 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Query: 2 NKQRELWIDAAKGFSIIFVVMGHSGDAAANHYLS--WFRMPLFFILSGLVFKPVDSCRYL 59 + QR WID AKG II VV+GH Y S W+ MPLFF++ G KP Sbjct: 6 SHQRIEWIDVAKGLGIIAVVLGHFYPRNTTFYESLYWWHMPLFFMIGGFFVKPTTLPTLK 65 Query: 60 GWAAKRTKGLMTPYAAYGMLIATVLLLFSFNFRDFA---ENIARLLYGGLSLTGPYGVFW 116 + A+R L+ Y YG + +LL F R A + + RL+YGG L G VFW Sbjct: 66 AFLARRFWPLLKQYFGYG--VGLILLNFIIEQRTPAFTVDYLRRLIYGGTELNGYLSVFW 123 Query: 117 FITCLLFTQLLFGYIVRYPMRT---QLLLITAAYXXXXXXXXXXXXXFNLPWNIDVSLLA 173 F+T F+ LLF + Y + +L+ + F +P N+D+ L+A Sbjct: 124 FVTVYAFSSLLFSLLRGYLPKVWHEAILMAGLFWLGFSYPNAENVLGFPIPGNLDLVLVA 183 Query: 174 VTYYAVGYYGKKXXXXXXXXXXXXXXXXXXXXGVFALERAGMIHYSLNMKYKEYDAVVLD 233 + Y VG++ G+F + G I + L MK +L Sbjct: 184 LPYMFVGWWLFHYARHIVTQPWFMLVALGVFAGLFVAQSRGQIDFLLYMKSHHLTDPLLA 243 Query: 234 LFIPLLVSLTICAGVYWLSRHFQLQWLGNLGRNTIAIMYLHLPVNYALKYL 284 F+P+++ + AG L+ WL +GR+T+ IMY H V Y L+ L Sbjct: 244 SFVPVIICGGLFAGAKTLTGTVLGDWLDRIGRSTLPIMYGHKAVGYVLEKL 294 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.329 0.144 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,834,170,635 Number of extensions: 66700648 Number of successful extensions: 180802 Number of sequences better than 1.0e-05: 61 Number of HSP's gapped: 180810 Number of HSP's successfully gapped: 70 Length of query: 346 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 210 Effective length of database: 1,779,438,163 Effective search space: 373682014230 Effective search space used: 373682014230 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 131 (55.1 bits)