BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0427.0022.p (1106 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1T9S1.1 C1T9S1_9FIRM Putative uncharacterized protein 93 1e-16 C5CDL4.1 C5CDL4_9THEM Chromosome segregation ATPase-like protein 92 4e-16 A9KL86.1 A9KL86_CLOPH Chromosome segregation ATPase-like protein 91 6e-16 A8SSG3.1 A8SSG3_9FIRM Putative uncharacterized protein 87 8e-15 A7VGM5.1 A7VGM5_9CLOT Putative uncharacterized protein 84 1e-13 >C1T9S1.1 C1T9S1_9FIRM Putative uncharacterized protein Length = 1493 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 92/379 (24%), Positives = 172/379 (45%), Gaps = 34/379 (8%) Query: 1 MPRIERIRITGLKYEKMLKKY-DDMVLDLSNEDGPANTLITLMNGGGKGVLLQSIFQLLI 59 MP+IERIR+T +KY+ K++ +DM L +N L NGGGK +++Q + Q+++ Sbjct: 1 MPQIERIRLTNVKYDNGKKEFVNDMFLP-----AGSNCAFILENGGGKSLMVQLLLQVVL 55 Query: 60 PKAAWGKDNENQVEAFFHNHKKQLKPYTFHVAIEWRLDNSDRNEYMTTGIAMTAHSSVDQ 119 P + G + + + +T H+ +EWRLD+ + + Y+ TG T ++ Sbjct: 56 PNESIGVRPASDLVSGSDR-------FTGHILVEWRLDDPE-SRYLLTGFCFTRGYEDER 107 Query: 120 LEIKVXXXXXXXXXXXXXXXXTLSTLPLYDIDAGGPVSFESIQQFVRDHRGE----MASF 175 L + LPL ++ S++ + +R GE + F Sbjct: 108 L---FKYFMYTIQYDQIPNELDIENLPL--LENRKVRSYQELLVMLRRLSGEGGRRLDVF 162 Query: 176 GSHSSDLKKYYNFLAERDIHIGEWRNMRRINGEEGGIKGYFQKNDAFTNQNLFEKLIIPE 235 + KY L +I+ EWR ++ NG+EGG++G+F+K+ + L E+LIIP Sbjct: 163 QQDKGEKHKYVKHLETFNIYEREWRGIKTTNGDEGGMEGFFEKSK--KTEQLMERLIIPG 220 Query: 236 IGTSL-NEGLPEQEGSLQKMFMDAAIVAQRLPMLEQREKAFAEFTGLAAPLHELVKQGTE 294 + + N E+E L + F +P LE+ K F+ G + +K ++ Sbjct: 221 VDQVIFNRAGEEKE--LARAFTRHKDNLLSIPKLEKNIKDFSTIRGEGEKVLAAIKAYSD 278 Query: 295 ADLHYRETELLGRQMYTVIHDELKTAEEGRRKKADELVQLHQESR---QLRFEADNLNYL 351 L + ++Y +++ EE A L ++ + +L ++ D+L Y+ Sbjct: 279 CILERSGQKEKVARLYCSVNNR---KEEINALNAGLSADLEKQGKWLHELEYKLDSLPYI 335 Query: 352 RSKAEADRKQEDFQKISDN 370 R K E ++ F ++++ Sbjct: 336 RVKLELQDLEKKFIALTES 354 >C5CDL4.1 C5CDL4_9THEM Chromosome segregation ATPase-like protein Length = 1455 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/378 (23%), Positives = 170/378 (44%), Gaps = 41/378 (10%) Query: 1 MPRIERIRITGLKYEKMLKKYDDMVLDLSNEDGPANTLITLMNGGGKGVLLQSIFQLLIP 60 MPRI R+R+ ++Y+ K + D + + G NTL L NGGGK +L+Q + Q ++P Sbjct: 1 MPRIWRMRLVNIQYDAGKKVFADELFNF----GGKNTLFNLANGGGKTLLVQLMLQTVLP 56 Query: 61 KAAWGKDNENQVEAFFHNHKKQLKPYTFHVAIEWRLDNSDRNEYMTTGIAMTAHSSVDQL 120 + N+ ++ N + +T H+A+EWRLD+++ + ++ TG T + Sbjct: 57 NE---RLNKRRLSDLLQN-----RNFTGHIAVEWRLDSAEAD-FLLTGFCFTRGND---- 103 Query: 121 EIKVXXXXXXXXXXXXXXXXTLSTLPLYDIDAGGPVSFESIQQFVRDHRGEMASFGSHSS 180 E + P ++ P+S++ + + +++ +G + F S Sbjct: 104 ESGRLRYFMYTSHYKEANPYDIKHFPY--VNDKRPLSYDELLRLLKNLKG--SYFKVFYS 159 Query: 181 DLKK--YYNFLAERDIHIGEWRNMRRINGEEGGIKGYFQKNDAFTNQNLFEKLIIPEIGT 238 D K+ Y L+ ++ EWR ++ N EGGI +F N + L + L+IP Sbjct: 160 DSKRSDYLRELSTYNLFEKEWRRIKETNNNEGGIDDFF--NSLQSTDQLLDNLLIPVAEE 217 Query: 239 SLNEGLPEQEGSLQKMFMDAAIVAQRLPMLEQREKAFAEFTGLAAPLHELVKQGTEADLH 298 + EQ+ +L + F + +P LE+ K A L E ++ +A Sbjct: 218 LFYDDPREQKENLVEAFNNLKNKLLNIPELERNLKDLALVREKGQVLLEAFREREDASRE 277 Query: 299 YRETELLGRQMYT--------VIHDELKTAEEGRRKKADELVQLHQESRQLRFEADNLNY 350 + E + + MY+ + +ELK +E EL + +E + R+ +++ Y Sbjct: 278 FEERK-VNLAMYSNSLEHWHNCVVEELKEIDE-------ELRSIEREETKNRYLLESVKY 329 Query: 351 LRSKAEADRKQEDFQKIS 368 R A + K+++ +IS Sbjct: 330 SREYAAVEEKRQELFEIS 347 >A9KL86.1 A9KL86_CLOPH Chromosome segregation ATPase-like protein Length = 1474 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/272 (28%), Positives = 119/272 (43%), Gaps = 33/272 (12%) Query: 1 MPRIERIRITGLKYEKMLKKYDDMVLDLSNEDGPANTLITLMNGGGKGVLLQSIFQLLIP 60 MP I RIR+ +KY + YDD ++ + NTL L NGGGK VL+ + Q +IP Sbjct: 1 MPHINRIRVNNVKYNFGTQAYDDFIM----KPFCHNTLYDLANGGGKSVLMLLMLQNMIP 56 Query: 61 KAAWGKDNENQVEAFFHNHKKQLKPYTFHVAIEWRLDNSDRNE---YMTTGIAMTAHSSV 117 D + +E F T H IEWRLD+ D YM TG A + Sbjct: 57 NCTL--DEKQPIEKLFRTGDG---SQTIHSLIEWRLDDYDTENSFRYMLTGFC--ARKAT 109 Query: 118 DQLEIKVXXXXXXXXXXXXX-----XXXTLSTLPLYDIDAGGPVSFESIQQFV----RDH 168 +Q+ +V + LPL + +++ +++++ RD+ Sbjct: 110 NQVPEEVKDTASIEYFNYCVFYREYNENDIKNLPL--VKDKERITYTGLRKYLKDLERDN 167 Query: 169 RGEMASFGSHSSDLKKYYNFLAERDIHIGEWRNMRRINGEEGGIKGYFQKNDAFTNQNLF 228 E+ F K Y F+A I+ EW +R IN EG ++ YF+ N T + + Sbjct: 168 NYEVKIFDRK----KDYQAFVAYYGIYESEWEIIRGINKTEGHVRTYFETNYK-TTRKVV 222 Query: 229 EKLIIPEI---GTSLNEGLPEQEGSLQKMFMD 257 E L+I EI + G E+E ++ K +D Sbjct: 223 EDLLIEEIIQKSFTQKAGSSEEEETMSKTLLD 254 >A8SSG3.1 A8SSG3_9FIRM Putative uncharacterized protein Length = 1491 Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 100/391 (25%), Positives = 170/391 (43%), Gaps = 36/391 (9%) Query: 1 MPRIERIRITGLKYEKMLKKYDDMVLDLSNEDGPANTLITLMNGGGKGVLLQSIFQLLIP 60 MP I RIR+ +KY ++YDD + + + NTL L NGGGK +L+ + Q LIP Sbjct: 1 MPSINRIRVNNVKYNFGTQQYDDFTMRMYGK----NTLYDLANGGGKSILMLLLLQNLIP 56 Query: 61 KAAWGKDNENQVEAFFHNHKKQLKPYTFHVAIEWRLDNSDRNE---YMTTG-IAMTAHSS 116 D + VE F H IEW+LD +D E YMTTG A A + Sbjct: 57 NCTL--DEKQPVEKLFRAGGGNT---VIHSLIEWKLDEADIKEGYRYMTTGFCARKAKDT 111 Query: 117 VDQLEIKVXXXXXXXXXXX----XXXXXTLSTLPLYDIDAGGPVSFESIQQFVRDHRGEM 172 D E++ + LPL + ++F ++ +++D Sbjct: 112 ADAGEVQKDTASIEYFNYCIFYREYNKNDIVNLPLSE--GNERITFNGLKTYLKDLGHRD 169 Query: 173 ASFGSHSSDLK-KYYNFLAERDIHIGEWRNMRRINGEEGGIKGYFQKNDAFTNQNLFEKL 231 S D K +Y F++ +H W +R IN EG ++ YF+ N T + + E L Sbjct: 170 MSLEVRVFDKKGEYQRFISGYGLHESHWEIIRGINKTEGHVRTYFETN-YRTTRKVVEDL 228 Query: 232 IIPEI---GTSLNEGLPEQEGSLQKMFMDAAIVAQRLPMLEQREKAFAEFTGLAAPLHEL 288 +I EI + G +E ++ + +D + +L +L QR++ A + ++ L Sbjct: 229 LIEEIIEKAFATKTGRNGEEDTMAETLLD---IKDKLNVLAQRKRDIANYDHQIELINVL 285 Query: 289 VKQGTEADLHYRETELLGRQMYTVIHDELKTAEEG-------RRKKADELVQLHQESRQL 341 + Y + + + + + V +EG + KAD Q+ Q++++L Sbjct: 286 EGKVNSCIGLYEDNDRICKGLADVYATGRACTQEGDTHMEELAKAKADAGEQMEQQNKRL 345 Query: 342 RFEADNLNYLRSKAEADRKQEDF-QKISDNQ 371 +YLR + + +RK +D +I DN+ Sbjct: 346 ANLRVTRDYLRLE-DMNRKMDDTATQIEDNE 375 >A7VGM5.1 A7VGM5_9CLOT Putative uncharacterized protein Length = 1492 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 27/290 (9%) Query: 1 MPRIERIRITGLKYEKMLKKYDDMVLDLSNEDGPANTLITLMNGGGKGVLLQSIFQLLIP 60 MP I RIR+ +KY ++YDD + + + NTL L NGGGK VL+ + Q LIP Sbjct: 1 MPCINRIRVNNVKYNFGTQQYDDFSMRMYGK----NTLYDLANGGGKSVLMLLLLQNLIP 56 Query: 61 KAAWGKDNENQVEAFFHNHKKQLKPYTFHVAIEWRLDNSDRNE---YMTTGIAMTAHSSV 117 D++ +E F N T H IEW+LD++D + YMTTG Sbjct: 57 NCTL--DDKQPIEKLFRNGGGNT---TIHSLIEWKLDDADIKDGYRYMTTGFCARKAKES 111 Query: 118 DQ-----LEIKVXXXXXXXXXXXXXXXXTLSTLPLYDIDAGGPVSFESIQQFVRDHRGEM 172 D+ + + LPL + +++ ++ ++++ + Sbjct: 112 DEGASQDGQTAAIEYFNYCIFYRDYNKNDIINLPLS--NGNERITYSGLKSYIKELGHKD 169 Query: 173 ASFGSHSSDLK-KYYNFLAERDIHIGEWRNMRRINGEEGGIKGYFQKNDAFTNQNLFEKL 231 S + K +Y F++E +H W +R IN EG ++ YF+ N T + + E L Sbjct: 170 MSLEVRLFERKGEYQRFISEYGLHESHWEIIRGINKTEGHVRTYFETNYK-TTRKVVEDL 228 Query: 232 IIPEI---GTSLNEGLPEQEGSLQKMFMDAAIVAQRLPMLEQREKAFAEF 278 +I EI G E ++ + +D + +L +L Q+++ A F Sbjct: 229 LIEEIIEKAFLTRTGRDGDESTMAETLLD---IKDKLNVLAQKKRDIANF 275 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.132 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,482,831,137 Number of extensions: 210977142 Number of successful extensions: 811411 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 812603 Number of HSP's successfully gapped: 15 Length of query: 1106 Length of database: 3,060,696,203 Length adjustment: 147 Effective length of query: 959 Effective length of database: 1,675,806,998 Effective search space: 1607098911082 Effective search space used: 1607098911082 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 137 (57.4 bits)