BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0427.0007.p (335 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5N9.1 B3K5N9_9BACI Glycosidase PH1107-related 580 e-164 B3KEQ9.1 B3KEQ9_9BACI Glycosidase PH1107-related 506 e-141 A6PP50.1 A6PP50_9BACT Glycosidase, PH1107-related 385 e-105 C0A632.1 C0A632_9BACT Putative uncharacterized protein 379 e-103 Q6AKE2.1 Q6AKE2_DESPS Putative uncharacterized protein 218 9e-55 >B3K5N9.1 B3K5N9_9BACI Glycosidase PH1107-related Length = 333 Score = 580 bits (1496), Expect = e-164, Method: Compositional matrix adjust. Identities = 270/327 (82%), Positives = 298/327 (91%) Query: 8 IGALESSLPIRRHPANPVLDAARVPYPTALVFNAGVAKFGGRYVMVFRNDYGSLEKQTIE 67 IG L SS IRRHP NP+LDA+RVPYPTALVFNAGV KF G+YVMVFRNDYGS+E++T+E Sbjct: 6 IGNLISSSVIRRHPDNPILDASRVPYPTALVFNAGVTKFNGKYVMVFRNDYGSVERRTLE 65 Query: 68 PSHTTDLGIAFSDDGIHWTAGPKPVFKLRDEEIVRAYDPRLTVIDGRCYMCFAVDTRHGI 127 P HTTDLG+AFSDDG+HW PKP FKL D+EI+RAYDPRLTVIDGRCYMCFAVDT+HGI Sbjct: 66 PHHTTDLGVAFSDDGVHWEVQPKPCFKLHDQEIIRAYDPRLTVIDGRCYMCFAVDTQHGI 125 Query: 128 RGGIAVTDDFESFEILSLSTPDLRNMVLFPERIGGNFVRLERPFTVYSRGGVDRFDTWIS 187 RGG+AVTDDF SFEILSLSTPDLRNMVLFPE+IGGN+VRLERPFTVYSRGGVDRFD WIS Sbjct: 126 RGGVAVTDDFVSFEILSLSTPDLRNMVLFPEKIGGNYVRLERPFTVYSRGGVDRFDMWIS 185 Query: 188 ESPDLIYWGRSELLLSVEQVPFANDKIGPAAPPVKTSKGWLTTFHAVDIDPARGKNGWEP 247 ESPDL YWG S LLL+VE V FANDKIGPAAPP+KT GWLT+FHAVD+DPARGKNGWEP Sbjct: 186 ESPDLKYWGNSGLLLAVEDVAFANDKIGPAAPPIKTKFGWLTSFHAVDLDPARGKNGWEP 245 Query: 248 SWKKRYTAGIMLLDLDNPKKILGMSASPLLAPEAAYETDGGFRNNVIFPGGMVLEEDGEV 307 SWKKRYTAG+M+LDLDNPKKI+GM PLL PE +YET+GGFRNNVIFPGGM+LEEDGEV Sbjct: 246 SWKKRYTAGLMMLDLDNPKKIIGMYKEPLLTPEVSYETEGGFRNNVIFPGGMILEEDGEV 305 Query: 308 KIYYGAADTVECLATAHVDDLIRLCLE 334 KIYYGAAD VECLATAH+D+LI+LCL Sbjct: 306 KIYYGAADAVECLATAHIDELIQLCLN 332 >B3KEQ9.1 B3KEQ9_9BACI Glycosidase PH1107-related Length = 337 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 239/329 (72%), Positives = 275/329 (83%) Query: 7 IIGALESSLPIRRHPANPVLDAARVPYPTALVFNAGVAKFGGRYVMVFRNDYGSLEKQTI 66 I+G L SS + RH ANP+L VPY A+VFNAGVAKF G+YVMVFRNDYG K + Sbjct: 5 IVGPLFSSPIMTRHSANPILTPGDVPYGPAMVFNAGVAKFKGKYVMVFRNDYGDELKGIV 64 Query: 67 EPSHTTDLGIAFSDDGIHWTAGPKPVFKLRDEEIVRAYDPRLTVIDGRCYMCFAVDTRHG 126 P HTT+LG+AFSDDGI W PKP + DEE++R YDPRLTVI +CYMCFAVDT+HG Sbjct: 65 APHHTTNLGLAFSDDGIKWDVQPKPCWSWHDEEVIRVYDPRLTVIGEQCYMCFAVDTKHG 124 Query: 127 IRGGIAVTDDFESFEILSLSTPDLRNMVLFPERIGGNFVRLERPFTVYSRGGVDRFDTWI 186 +RGGIAVT+DF SFE+LSLS PD RNMVLFPERIGG +VRLERP VYSRGG+DRFD W+ Sbjct: 125 LRGGIAVTEDFRSFEVLSLSLPDNRNMVLFPERIGGKYVRLERPMPVYSRGGIDRFDMWM 184 Query: 187 SESPDLIYWGRSELLLSVEQVPFANDKIGPAAPPVKTSKGWLTTFHAVDIDPARGKNGWE 246 S+SPDL YWG S+LLL+VE V +ANDK+GP APPVKT KGWLT FHAVDIDP+RGKNGWE Sbjct: 185 SDSPDLKYWGNSKLLLAVEDVAYANDKVGPGAPPVKTDKGWLTLFHAVDIDPSRGKNGWE 244 Query: 247 PSWKKRYTAGIMLLDLDNPKKILGMSASPLLAPEAAYETDGGFRNNVIFPGGMVLEEDGE 306 SWKKRYT GI+LLDL +P +I+G + +PLLAPEA YETDGGFRN+VIFPGGM+LE+ GE Sbjct: 245 DSWKKRYTTGILLLDLADPSRIIGRAETPLLAPEADYETDGGFRNHVIFPGGMILEDTGE 304 Query: 307 VKIYYGAADTVECLATAHVDDLIRLCLEG 335 VKIYYGAADTVECLATAHVDDL+ LCL+G Sbjct: 305 VKIYYGAADTVECLATAHVDDLLHLCLKG 333 >A6PP50.1 A6PP50_9BACT Glycosidase, PH1107-related Length = 331 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 194/328 (59%), Positives = 234/328 (71%), Gaps = 14/328 (4%) Query: 15 LPIRRHPANPVLDAARVPYPTALVFNAGVAKFGGRYVMVFRNDYGSLEKQTIEPSHTTDL 74 + + RHP+NPVL A +P+ +L+FNAGV KF GRYVMVFRND G + T+L Sbjct: 1 MALVRHPSNPVLSAKDIPFDASLIFNAGVCKFNGRYVMVFRNDVGFGPNGYGK--TYTNL 58 Query: 75 GIAFSDDGIHWTAGPKPV-----FKLRDEEIVRAYDPRLTVIDGRCYMCFAVDTRHGIRG 129 GIA+S DG+ W P+P D E+ R YDPRLTVIDGRCY+CFAVDT HG+RG Sbjct: 59 GIAYSSDGVKWEVQPRPWKVAADIVAADPELSRFYDPRLTVIDGRCYLCFAVDTMHGVRG 118 Query: 130 GIAVTDDFESFEILSLSTPDLRNMVLFPERIGGNFVRLERPFTVYSRGGVDRFDTWISES 189 GIAVTDDF+ FE+LS+S PD RNMVLFPE+ G FVRLERPF YSRG ++FD W S S Sbjct: 119 GIAVTDDFDHFEVLSMSAPDNRNMVLFPEKFDGKFVRLERPFPEYSRGYQEKFDIWSSMS 178 Query: 190 PDLIYWGRSELLLSVEQVPFANDKIGPAAPPVKTSKGWLTTFHAVDIDPARGKNGWEP-- 247 PD YWG + L+L +E VP+AN KIGPAAPP+KT KGWL TFHA D +R GWE Sbjct: 179 PDCRYWGDTRLVLGMEDVPYANAKIGPAAPPIKTPKGWLCTFHATYKDMSRNLFGWENAN 238 Query: 248 ----SWKKRYTAGIMLLDLDNPKKILGMSASPLLAPEAAYETDGGFRNNVIFPGGMVLEE 303 +W K Y G+MLL LD+P+K++G++ PLL YE + GFR +VIFPGGM+LE+ Sbjct: 239 NPDVTWNKEYFGGLMLLALDDPQKVIGLAPEPLLKATEKYELE-GFRGSVIFPGGMLLED 297 Query: 304 DGEVKIYYGAADTVECLATAHVDDLIRL 331 DGEVKIYYG ADTVECLATA VDDL+ L Sbjct: 298 DGEVKIYYGGADTVECLATASVDDLLAL 325 >C0A632.1 C0A632_9BACT Putative uncharacterized protein Length = 377 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/339 (56%), Positives = 236/339 (69%), Gaps = 20/339 (5%) Query: 11 LESSLPIRRHPANPVLDAARVPYPTALVFNAGVAKFGGRYVMVFRNDYGSLEKQTIEPSH 70 L S + RHPANPVL P+ VFNAGVAK+ GRYVM+FRNDYG+ + P Sbjct: 23 LFSDAMLTRHPANPVLKHTDCPFKATTVFNAGVAKYQGRYVMLFRNDYGTWGQPP--PFE 80 Query: 71 TTDLGIAFSDDGIHWTAGPKPVF----------------KLRDEEIVRAYDPRLTVIDGR 114 T+LG+A+SDDGI WT +PVF + +EI R YDPR+TV+DGR Sbjct: 81 GTNLGLAWSDDGIKWTVTKEPVFDEERARVALAGLYNVKRFGPQEIRRVYDPRITVVDGR 140 Query: 115 CYMCFAVDTRHGIRGGIAVTDDFESFEILSLSTPDLRNMVLFPERIGGNFVRLERPFTVY 174 +CFAVDT HG+ GG+A T+DF SF+ LSLSTPD RNMV+FPE+IGG +VRLERPF +Y Sbjct: 141 LILCFAVDTAHGVLGGVATTEDFSSFKFLSLSTPDNRNMVVFPEKIGGEYVRLERPFPIY 200 Query: 175 SRGGVDRFDTWISESPDLIYWGRSELLLSVEQVPFANDKIGPAAPPVKTSKGWLTTFHAV 234 RG + F+ W S SPDL YWG + L+L E+VPFAN KIGPAAPPV+T GWLT H+V Sbjct: 201 GRGKPEAFEIWASRSPDLCYWGDTRLVLGSEEVPFANSKIGPAAPPVRTRAGWLTPIHSV 260 Query: 235 DIDPARGKNGWEPS-WKKRYTAGIMLLDLDNPKKILGMSASPLLAPEAAYETDGGFRNNV 293 D GWE S W KRY AG+MLLDL++P K++G+ PLL PEA YE D GFR +V Sbjct: 261 FKDELHPLKGWEKSPWIKRYDAGLMLLDLEDPTKVIGLCRKPLLTPEADYELD-GFRGSV 319 Query: 294 IFPGGMVLEEDGEVKIYYGAADTVECLATAHVDDLIRLC 332 IFP G++LE++GE ++YYGAADTV +A+AHVDDLI C Sbjct: 320 IFPCGLILEDNGEARLYYGAADTVVAMASAHVDDLIAAC 358 >Q6AKE2.1 Q6AKE2_DESPS Putative uncharacterized protein Length = 309 Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 127/329 (38%), Positives = 180/329 (54%), Gaps = 40/329 (12%) Query: 17 IRRHPANPVLDAARVPYPTALVFNAGVAKFGGRYVMVFRNDYGSLEKQTIEPSHTTD--- 73 I R+ NP+L VPYP A V NAGV KF +Y+M+FR SH T Sbjct: 4 IHRYEKNPILSKDDVPYPVATVHNAGVTKFNDKYIMIFR-------------SHLTSGRS 50 Query: 74 -LGIAFSDDGIHWTAGPKPVFKLRDEEIVRAY------DPRLTVIDGRCYMCFAVDTRHG 126 LG+A SDDG + KP E + + Y DPR+T ID + ++ +R+G Sbjct: 51 ILGLAVSDDGFRFKVSDKPFMTPAKEGLFQIYEEYGLEDPRITCIDDEYLITYSAYSRYG 110 Query: 127 IRGGIAVTDDFESFEILSLST-PDLRNMVLFPERIGGNFVRLERPFTVYSRGGVDRFDTW 185 +R +A T DF++ + ++L T D RN+V+FPE+I G +VR++RP + + + W Sbjct: 111 VRIALAKTRDFKTIQRVALITEADYRNLVIFPEKIDGMYVRMDRPHS-----EISPWSIW 165 Query: 186 ISESPDLIYWGRSELLLSVEQVPFANDKIGPAAPPVKTSKGWLTTFHAVDIDPARGKNGW 245 IS SPDL YWG +++++ + KIGP APP+KT +GWL +H + Sbjct: 166 ISYSPDLKYWGDAKVIMKPAAYHWDEMKIGPGAPPIKTDQGWLNIYHG----------AF 215 Query: 246 EPSWKKRYTAGIMLLDLDNPKKILGMSASPLLAPEAAYETDGGFRNNVIFPGGMVLEEDG 305 + Y G+ L DL +P KI G+S +L PE YE G+ NV+F G V E DG Sbjct: 216 QTMAGCVYRLGVALHDLADPSKIRGVSDDWILEPETEYERI-GYVPNVVFTCGAVPEPDG 274 Query: 306 EVKIYYGAADTVECLATAHVDDLIRLCLE 334 +KIY+GAADTV C TA + DL+ LCL+ Sbjct: 275 TLKIYWGAADTVMCAGTASIKDLVNLCLQ 303 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.140 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,263,270,102 Number of extensions: 101679706 Number of successful extensions: 178985 Number of sequences better than 1.0e-05: 271 Number of HSP's gapped: 177945 Number of HSP's successfully gapped: 271 Length of query: 335 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 199 Effective length of database: 1,779,438,163 Effective search space: 354108194437 Effective search space used: 354108194437 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)