BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0427.0006.p (320 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DB20.1 B1DB20_9BACL Putative uncharacterized protein 431 e-119 B3KBV4.1 B3KBV4_9BACI Putative uncharacterized protein 428 e-118 A4H6B7.1 A4H6B7_LEIBR Putative uncharacterized protein 345 4e-93 Q4QH87.1 Q4QH87_LEIMA Putative uncharacterized protein 343 1e-92 A4HUP1.1 A4HUP1_LEIIN Putative uncharacterized protein 342 4e-92 >B1DB20.1 B1DB20_9BACL Putative uncharacterized protein Length = 321 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 199/316 (62%), Positives = 253/316 (80%) Query: 5 LTLQEQRIEFEAAKKIYESATLKFHGVDGLDVYNISIPFKRNGKRYLFGRVEHREEWARS 64 + L EQR FE K+IYESA L F G+DG DVYN SIPF+ GKR+++GRVE R+EWARS Sbjct: 1 MNLLEQRRRFEDNKRIYESAKLTFLGIDGFDVYNPSIPFEWKGKRFIYGRVEKRQEWARS 60 Query: 65 WVRLFEETGQDEWTVVKDSMIYTLEDPYISEIGDELVMGGTHVQYQSGRYSTFFGYFFRG 124 WVRLFE+TG DEWT+V D+MIY LEDPYIS + ++LV+GGTHV+Y GR +TF+GYF++G Sbjct: 61 WVRLFEQTGSDEWTLVPDTMIYQLEDPYISIVNEQLVLGGTHVRYNQGRLNTFYGYFYKG 120 Query: 125 TELDNLYYFTTGPNKMKDIRLVPLTDGKIGVFSRPRSTEMRGKFGSESMIGFTVIDRLEE 184 T++ +L YFTTGP+ MKDIRLV L D +IGVFSRPRS ++R K+GSES+IGFT+I+ L+E Sbjct: 121 TDVHDLLYFTTGPDYMKDIRLVQLPDCRIGVFSRPRSEDVRQKYGSESLIGFTIINSLDE 180 Query: 185 LTADVIENAPYIHGIFGEGEWGGVNQAYLLDSGKIGVIGHICYQDKDENGGEVKVYLNMA 244 L++ VIENAP+I G+F + EWGG NQAYLL+SG+IGVIGHICY+ + E+ Y+NMA Sbjct: 181 LSSAVIENAPHIPGLFQKDEWGGCNQAYLLESGRIGVIGHICYKAVNSLDQEIWTYMNMA 240 Query: 245 FVFDPTTRESSDLHMIGSRPCYPPGPSKAPYLADCVFSSGIVMRPDGKADLYSGIGDCQA 304 F DP T + +DL +IG+RPCYP GPSK P L DC F++GI MRPDGK +L+SGIGD ++ Sbjct: 241 FALDPHTNQFTDLKIIGTRPCYPEGPSKKPNLTDCAFTAGIEMRPDGKVNLFSGIGDTES 300 Query: 305 GRITIDYPFAGNGHLV 320 GRI IDYPF G +V Sbjct: 301 GRIVIDYPFEREGAIV 316 >B3KBV4.1 B3KBV4_9BACI Putative uncharacterized protein Length = 313 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 200/316 (63%), Positives = 248/316 (78%), Gaps = 5/316 (1%) Query: 5 LTLQEQRIEFEAAKKIYESATLKFHGVDGLDVYNISIPFKRNGKRYLFGRVEHREEWARS 64 + L E R +F+A K+IYESA L F GV+G DVYN +IPF+ NGKRY++GRVE R EWARS Sbjct: 1 MNLLELRQQFDANKRIYESAKLVFRGVEGFDVYNPTIPFQWNGKRYIYGRVEKRHEWARS 60 Query: 65 WVRLFEETGQDEWTVVKDSMIYTLEDPYISEIGDELVMGGTHVQYQSGRYSTFFGYFFRG 124 WVRLFE++G DEWT V ++MIY LEDPYIS I +LV+GGTHV+Y+ GR TF+GYF++G Sbjct: 61 WVRLFEQSGPDEWTAVPNTMIYQLEDPYISVIDKQLVLGGTHVRYKQGRLDTFYGYFYKG 120 Query: 125 TELDNLYYFTTGPNKMKDIRLVPLTDGKIGVFSRPRSTEMRGKFGSESMIGFTVIDRLEE 184 ++L +L+YFTTGP MKDIRLV L DG+IGVFSRPR +R +FGSES++GFT ID L++ Sbjct: 121 SDLHDLFYFTTGPEYMKDIRLVELRDGRIGVFSRPRGEGIRKEFGSESLVGFTTIDSLDD 180 Query: 185 LTADVIENAPYIHGIFGEGEWGGVNQAYLLDSGKIGVIGHICYQDKDENGGEVKVYLNMA 244 L+ +VIENAPYI G+F + EWGG NQAYLL+SGKIGVIGHICY G+ Y+NMA Sbjct: 181 LSPEVIENAPYIRGLFSKDEWGGCNQAYLLESGKIGVIGHICYAQ-----GDTSTYMNMA 235 Query: 245 FVFDPTTRESSDLHMIGSRPCYPPGPSKAPYLADCVFSSGIVMRPDGKADLYSGIGDCQA 304 FV DP T + SDL +IG+RPCYP GP+K +L DC F++GI MRPDGK +LYSGIGD +A Sbjct: 236 FVLDPRTNQFSDLKIIGTRPCYPDGPAKKAHLTDCAFTAGIEMRPDGKVNLYSGIGDTEA 295 Query: 305 GRITIDYPFAGNGHLV 320 RI IDYPF G +V Sbjct: 296 ARIVIDYPFEKEGAIV 311 >A4H6B7.1 A4H6B7_LEIBR Putative uncharacterized protein Length = 318 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 169/316 (53%), Positives = 225/316 (71%), Gaps = 11/316 (3%) Query: 7 LQEQRIEFE--AAKKIYESATLKFHGVDGLDVYNISIPFKRNGKRYLFGRVEHREEWARS 64 ++E+++EFE + + IYE A L F GVDG+DVYN S+PFK NG+ ++FGRVE R EWA S Sbjct: 7 VKEEKLEFEKNSDQHIYEKALLTFKGVDGMDVYNCSVPFKSNGQTHIFGRVEKRCEWANS 66 Query: 65 WVRLFEETGQDEWTVVKDSMIYTLEDPYISEIGDELVMGGTHVQYQSGRYSTFFGYFFRG 124 +VRLF ETG+DE+T+V D+M++ LEDP++S I +E+V GGTH++ + R T++ FFRG Sbjct: 67 FVRLFVETGKDEFTLVPDNMVWQLEDPFVSNIDNEMVFGGTHIRKTNNRVCTYYCDFFRG 126 Query: 125 TELDNLYYFTTGPNKMKDIRLVPLTDGKIGVFSRPRSTEMRGKFGSESMIGFTVIDRLEE 184 T +++ YFTTGP+ MKDIRLV L + KIGVFSRP++ + + IGFTVI+ + E Sbjct: 127 TA-ESMSYFTTGPDNMKDIRLVTLANNKIGVFSRPKT-------AAHAFIGFTVINNIME 178 Query: 185 LTADVIENAPYIHGIFGEGEWGGVNQAYLLDSGKIGVIGHICYQDKDENGGEVKVYLNMA 244 LT V+E A ++ I G WGGVNQAYLL S K+G I H Y DKDE+G ++ VY N + Sbjct: 179 LTPTVVEEASPLNVIHA-GAWGGVNQAYLLSSDKVGCISHYSYIDKDEHGNDIAVYTNYS 237 Query: 245 FVFDPTTRESSDLHMIGSRPCYPPGPSKAPYLADCVFSSGIVMRPDGKADLYSGIGDCQA 304 FV +P RE D +IG++ CYP K L DC F+SGIVMR DG+ DLYSG+GD Sbjct: 238 FVLNPYIREVEDAKIIGTKGCYPKCSPKVDKLLDCAFTSGIVMREDGRCDLYSGLGDAYE 297 Query: 305 GRITIDYPFAGNGHLV 320 GRITIDYPF G+G L+ Sbjct: 298 GRITIDYPFEGHGTLI 313 >Q4QH87.1 Q4QH87_LEIMA Putative uncharacterized protein Length = 318 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 171/317 (53%), Positives = 222/317 (70%), Gaps = 11/317 (3%) Query: 6 TLQEQRIEFE--AAKKIYESATLKFHGVDGLDVYNISIPFKRNGKRYLFGRVEHREEWAR 63 T++E+++EFE + IYE A L F GVDG+DVYN S PFK G+ ++FGRVE R EWA Sbjct: 6 TVKEEKLEFEKNCDQHIYEKALLTFKGVDGMDVYNCSAPFKYEGRTHIFGRVEKRLEWAN 65 Query: 64 SWVRLFEETGQDEWTVVKDSMIYTLEDPYISEIGDELVMGGTHVQYQSGRYSTFFGYFFR 123 S+VRLF ET +DE+T+V +M++ LEDP++S I +E+ +GGTH++ + R T++ FFR Sbjct: 66 SYVRLFVETNKDEFTLVPGNMVWQLEDPFVSNIDNEMFLGGTHIRKTNNRVFTYYCDFFR 125 Query: 124 GTELDNLYYFTTGPNKMKDIRLVPLTDGKIGVFSRPRSTEMRGKFGSESMIGFTVIDRLE 183 GT +NL YFTTGP+ MKDIRLV L + KIGVFSRP++ + + IGFTVI+ + Sbjct: 126 GTA-ENLSYFTTGPDNMKDIRLVKLANNKIGVFSRPKT-------AAHAFIGFTVINNVM 177 Query: 184 ELTADVIENAPYIHGIFGEGEWGGVNQAYLLDSGKIGVIGHICYQDKDENGGEVKVYLNM 243 ELT VIE AP ++ + G WGGVNQAYLL S K+G I H Y DKDE+G E+ VY N Sbjct: 178 ELTPTVIEEAPPLN-VIHTGAWGGVNQAYLLSSDKLGCISHYSYIDKDEDGNEITVYTNY 236 Query: 244 AFVFDPTTRESSDLHMIGSRPCYPPGPSKAPYLADCVFSSGIVMRPDGKADLYSGIGDCQ 303 +FV +P RE D +IG++ CYP K L DC FSSGIVMR DG+ DLYSG+GD Sbjct: 237 SFVLNPYLREVEDARIIGTKGCYPKCSPKVHKLLDCAFSSGIVMREDGRCDLYSGLGDAH 296 Query: 304 AGRITIDYPFAGNGHLV 320 GRITIDYPF G+G L+ Sbjct: 297 EGRITIDYPFEGHGTLI 313 >A4HUP1.1 A4HUP1_LEIIN Putative uncharacterized protein Length = 315 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 167/314 (53%), Positives = 222/314 (70%), Gaps = 10/314 (3%) Query: 7 LQEQRIEFEAAKKIYESATLKFHGVDGLDVYNISIPFKRNGKRYLFGRVEHREEWARSWV 66 +++ + FEA K++YES L F GVDG DVYN S+PF GK +++GRVE R+ WA S V Sbjct: 1 MKQVKAAFEANKRVYESVLLTFKGVDGYDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHV 60 Query: 67 RLFEETGQDEWTVVKDSMIYTLEDPYISEIGDELVMGGTHVQYQSGRYSTFFGYFFRGTE 126 RLFEETG+DE+TVV + LEDP+I++I +E++ GGTHV+ S ++GYF+RGT Sbjct: 61 RLFEETGKDEFTVVP-GFYFQLEDPHIAKINNEMIFGGTHVRKDKQEISAYYGYFYRGTP 119 Query: 127 LDNLYYFTTGPNKMKDIRLVPLTDGKIGVFSRPRSTEMRGKFGSESMIGFTVIDRLEELT 186 D L YFTTGP+ MKDIR++ L DG++GVFSRPR G ++ IGF +++ ++EL Sbjct: 120 -DELKYFTTGPDCMKDIRVLQLQDGRLGVFSRPR-------VGHKASIGFVILNSIDELG 171 Query: 187 ADVIENAPYIHGIFGEGEWGGVNQAYLLDSGKIGVIGHICYQDKDENGGEVKVYLNMAFV 246 A+VI AP + I E WGGVNQAYLL SGK+G IGH Y+D +E VY+N +FV Sbjct: 172 AEVIAKAPPLD-ILPENAWGGVNQAYLLSSGKVGCIGHYSYEDTNEKQQPQSVYVNYSFV 230 Query: 247 FDPTTRESSDLHMIGSRPCYPPGPSKAPYLADCVFSSGIVMRPDGKADLYSGIGDCQAGR 306 DP +R +D +IG++ CYPP K P LADCVF+SGIVMR DG+ DLYSG+GD + GR Sbjct: 231 LDPQSRAIADAKIIGTKSCYPPCEPKVPLLADCVFASGIVMRSDGRVDLYSGVGDSREGR 290 Query: 307 ITIDYPFAGNGHLV 320 ITIDYPF G+G ++ Sbjct: 291 ITIDYPFKGHGTII 304 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.141 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,175,287,495 Number of extensions: 99871023 Number of successful extensions: 194340 Number of sequences better than 1.0e-05: 75 Number of HSP's gapped: 194050 Number of HSP's successfully gapped: 75 Length of query: 320 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 185 Effective length of database: 1,788,859,178 Effective search space: 330938947930 Effective search space used: 330938947930 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)