BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0422.0010.p
         (195 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KL07.1 B3KL07_9BACI Putative uncharacterized protein                201   4e-50
B1DDT6.1 B1DDT6_9BACL Putative uncharacterized protein                176   1e-42
C0ZGF7.1 C0ZGF7_BREBN Putative uncharacterized protein                134   3e-30

>B3KL07.1 B3KL07_9BACI Putative uncharacterized protein
          Length = 228

 Score =  201 bits (510), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 98/196 (50%), Positives = 138/196 (70%), Gaps = 1/196 (0%)

Query: 1   MAQRLATEYVKATLQMTEFQMKQFLLTADTCFISHRVKILGGGEQEIVLEEAGGEEVHLS 60
           MAQRLATEYV AT+QMT+ QM QFL       +++RVK++  GEQE VLE+  GEEVHL 
Sbjct: 33  MAQRLATEYVNATMQMTDIQMDQFLQYTQAFRVTNRVKVMDSGEQEFVLEDESGEEVHLP 92

Query: 61  FQQRGSIYVCTLSCRIVNPHLNNAIRKLFVTYKGTGTVNRIYQGLTMVYVYENGSVRRIS 120
           F+++  +YVC LSCR+V PHL NA+RKLF  +KG+G VNRIY+G TM Y Y  G+V RI+
Sbjct: 93  FERKNGLYVCELSCRLVTPHLTNAVRKLFAAFKGSGKVNRIYRGFTMSYDYHAGTVHRIT 152

Query: 121 EVTPLGSKLVYQHRHSLAEMLRLYKSDAVEQEIESLRVNIDRLLDQRNGVCRNEEI-QEI 179
           +V    S ++Y+++++  E+ RL+ S+  E+EIES++ +I+ LLDQR     ++ I + I
Sbjct: 153 QVAGNDSIVIYEYKNTAGELQRLFNSNEAEKEIESIQHHINVLLDQRIAAGNDKLITKTI 212

Query: 180 DRSLAEVTRKLFELEA 195
           D  L    ++LF LEA
Sbjct: 213 DERLRRFNQRLFVLEA 228


>B1DDT6.1 B1DDT6_9BACL Putative uncharacterized protein
          Length = 196

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 131/196 (66%), Gaps = 1/196 (0%)

Query: 1   MAQRLATEYVKATLQMTEFQMKQFLLTADTCFISHRVKILGGGEQEIVLEE-AGGEEVHL 59
           MAQRLATEYV A LQ+T  +MKQF+   D   +   VK+L  G QE+VLE+ AG EEV L
Sbjct: 1   MAQRLATEYVSAKLQLTSDEMKQFIRFFDDQQVCMNVKVLDNGNQELVLEDVAGKEEVTL 60

Query: 60  SFQQRGSIYVCTLSCRIVNPHLNNAIRKLFVTYKGTGTVNRIYQGLTMVYVYENGSVRRI 119
           +F+++   YVC LSCR+++P L NA+RK    ++G   VNRIY   TM+Y Y NGSVR+I
Sbjct: 61  TFERQQDYYVCELSCRLIHPKLTNAMRKAVTAFRGDAVVNRIYSHYTMIYHYTNGSVRKI 120

Query: 120 SEVTPLGSKLVYQHRHSLAEMLRLYKSDAVEQEIESLRVNIDRLLDQRNGVCRNEEIQEI 179
            E T  G+++V++++ ++ ++ R++KS  +E+EIE +   I+ LLD RN      +I  I
Sbjct: 121 VESTSSGTRVVFEYKDTVGQLERVFKSRLIEREIELVNNAINELLDLRNQTKDRLQIAGI 180

Query: 180 DRSLAEVTRKLFELEA 195
           D  L  +T+KLF LEA
Sbjct: 181 DERLTMLTKKLFVLEA 196


>C0ZGF7.1 C0ZGF7_BREBN Putative uncharacterized protein
          Length = 198

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 115/198 (58%), Gaps = 5/198 (2%)

Query: 1   MAQRLATEYVKATLQMTEFQMKQFLLTADTCFISHRVKILGGGEQEIVLEEAGGEEVHLS 60
           MAQRLAT Y KA   + E ++ QF+       IS +VK+   G+++++L +  GE + LS
Sbjct: 1   MAQRLATNYAKAYFTVNEEELNQFVSLFTNEHISVQVKVCDNGDRDVILNDKTGE-IQLS 59

Query: 61  FQQRGSIYVCTLSCRIVNPHLNNAIRKLFVTYKGTGTVNRIYQGLTMVYVYENGSVRRIS 120
           F + GS Y C  S  I +  L NA+RK    ++G G V+RIY G TMVY Y+ GSV  I 
Sbjct: 60  FCRVGSRYSCDSSYLIQDRQLANAMRKAMKAFRGYGIVHRIYDGFTMVYHYDQGSVVSIQ 119

Query: 121 EVTPLGSKLVYQHR--HSLAEMLRLYKSDAVEQEIESLRVNIDRLLDQRNGVCRN--EEI 176
           E+T      ++++   H   E+  L++ D  EQEIESLR   DR LD RN   R   E++
Sbjct: 120 ELTGDEEVSIFENNSLHMANELEALFQQDGSEQEIESLRQETDRWLDLRNWAKRTAPEKL 179

Query: 177 QEIDRSLAEVTRKLFELE 194
             ID  L  ++R+LFELE
Sbjct: 180 PAIDVRLVTLSRRLFELE 197


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.135    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,030,317,014
Number of extensions: 40647275
Number of successful extensions: 104077
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 104074
Number of HSP's successfully gapped: 3
Length of query: 195
Length of database: 3,060,696,203
Length adjustment: 128
Effective length of query: 67
Effective length of database: 1,854,806,283
Effective search space: 124272020961
Effective search space used: 124272020961
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)