BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0422.0005.p (618 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9H4.1 B1D9H4_9BACL Polysaccharide biosynthesis protein CapD 670 0.0 Q24S56.1 Q24S56_DESHY Putative uncharacterized protein 594 e-167 B8FWK8.1 B8FWK8_DESHD Polysaccharide biosynthesis protein CapD 587 e-165 C0ZHW1.1 C0ZHW1_BREBN Putative polysaccharide biosynthesis protein 566 e-159 Q9K6L1.1 Q9K6L1_BACHD Capsular polysaccharide biosynthesis 551 e-154 >B1D9H4.1 B1D9H4_9BACL Polysaccharide biosynthesis protein CapD Length = 609 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/601 (57%), Positives = 424/601 (70%), Gaps = 4/601 (0%) Query: 9 MTAKTRVYLLFLIDLAIIWFSIVTSYMFRFSKGIPDEYTLQMLVFGLIATVTFGGSLIYF 68 M A R ++ DLA + S +Y S +P + L + +A V L Sbjct: 1 MRAHYRTKVIVAGDLAAVLASFAIAYALEPS--VPQGGAVAWLSYAALAAVVGFWRLHRL 58 Query: 69 GLYRRLWQYASIDEIISVFKAIVVGAVLSFVAAFIILPERVPLSIEVRAMETILLLVGGV 128 L+RR+WQY I +++ + + ++ AV+ F A +++ E PL + A T LLL Sbjct: 59 RLHRRIWQYTGISDMLCLLQVALISAVVPFAAWWVMQGEAHPLLMLHHAAGTFLLLTAP- 117 Query: 129 RFCWRVFRND-RINSKDTETHTLIVGAGDCGILIAREMMGPSFAHTRIVGFIDDSADKYH 187 R WR+F + + LI+GAG CG LIA+EMM VGFIDD K+ Sbjct: 118 RLAWRIFCDKYSVRKPAGGRRALIIGAGSCGTLIAKEMMQNDGVSVTPVGFIDDDPYKHR 177 Query: 188 LSILGVPVLGNRYDIPRLVKELEIHEIIIAMPSVSRTEISEIINLAKATGAKLKIIPALN 247 + ILG+ VLGNR +I +V+ I EIIIAMPSVS+T+ISE++NL K T AKLKI+P L Sbjct: 178 MDILGLQVLGNRKEIACVVESHHIDEIIIAMPSVSKTQISELVNLCKTTKAKLKIVPDLQ 237 Query: 248 DLIAGKISVKKLRDVSVEDLLGREPIVADMNSILGYVHNKTVLVTGAGGSIGSELCRQIS 307 D+I + + ++RDVSVEDLLGR+PI D+ I GYV K VLVTGAGGSIGSELCRQI+ Sbjct: 238 DMIDNRGAAGRMRDVSVEDLLGRDPIRTDLEHIAGYVQEKVVLVTGAGGSIGSELCRQIA 297 Query: 308 PFAPDKLLILGHGENSIYTIEMELRKSFPDLNIVTVIADVQDRTRMMEVFQSHSPXXXXX 367 PF P KLL+LGHGENSIYTIEME+R +FP L I TVIADVQDRTR+ VF P Sbjct: 298 PFKPSKLLLLGHGENSIYTIEMEMRSAFPQLAIETVIADVQDRTRIDAVFAKFKPQVVFH 357 Query: 368 XXXXXXXPLMERNPSEAIKNNVFGTRNVADCADKYGAERFVLISSDKAVNPTSVMGATKR 427 PLMERNP+EAIKNNVFGT+NVA+CAD YGAERFVLIS+DKAVNPTSVMG TKR Sbjct: 358 AAAHKHVPLMERNPAEAIKNNVFGTKNVAECADAYGAERFVLISTDKAVNPTSVMGTTKR 417 Query: 428 IAEMYVQSLNTSSPTKFSAVRFGNVLGSRGSVIPAFKQQIAAGGPVTVTHPEMVRYFMTI 487 IAEM++QSL+ S TKF AVRFGNVLGSRGSVIP FK QI GGPVTVTHPEMVRYFMTI Sbjct: 418 IAEMFIQSLDMHSNTKFVAVRFGNVLGSRGSVIPRFKDQIVKGGPVTVTHPEMVRYFMTI 477 Query: 488 PEAVQLVIQSGSFANGGEVFVLDMGQPVRILTLAEDLITLSGYEPYKDIEITFSGIREGE 547 PEAVQLVIQ+GSFA GGEVF+LDMG+PV+I LA DLI LSGYEP+ DI+ITFSG+REGE Sbjct: 478 PEAVQLVIQAGSFAKGGEVFILDMGKPVKIYDLAVDLIRLSGYEPHVDIDITFSGMREGE 537 Query: 548 KLYEELLTAEENLGSTRHNRIFIGRPNVLSQNQLELEFKRLERVLSEDGDAIREVINQIV 607 KLYEELLT EE L ST+HNRIFIGRP L++ +L+ E +++E+VL + D IR V+ +V Sbjct: 538 KLYEELLTNEEGLSSTKHNRIFIGRPVQLNRKELDFEIRKMEKVLGQHPDDIRAVLQHLV 597 Query: 608 P 608 P Sbjct: 598 P 598 >Q24S56.1 Q24S56_DESHY Putative uncharacterized protein Length = 620 Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust. Identities = 306/611 (50%), Positives = 413/611 (67%), Gaps = 12/611 (1%) Query: 9 MTAKTRVYLLFLIDLAIIWFSIVTSYMFRFS----KGIPDEYTLQMLVFGLIATVTFGGS 64 M + R LL +ID +I ++ S+ RF+ IP+EY L + AT+ + Sbjct: 1 MILRKRTLLLMVIDAVLINLAVFLSFYIRFAVDGDGTIPEEYLLTLTHSAWTATLIYLSV 60 Query: 65 LIYFGLYRRLWQYASIDEIISVFKAIVVGAVLSFVAAFIILPERVPLSIEVRAMETILLL 124 FGLY +LWQYASI E+IS+ A+ V A + + I P R P ++ + L L Sbjct: 61 FYIFGLYNKLWQYASIGELISIIFAVTVAAAGTITVVYFIAPMRFPHTVSALMWFSTLFL 120 Query: 125 VGGVRFCWRVFRNDRINSK--DTETHTLIVGAGDCGILIAREMMGPSFAHTRIVGFIDDS 182 +GG RF WR+ +++ ++ LI+GAGD G++ ARE+ ++ R VG+IDD+ Sbjct: 121 IGGSRFIWRILQDNIFTPHVPGSQNQVLIIGAGDAGVMAARELKNKNYREGRPVGYIDDA 180 Query: 183 ADKYHLSILGVPVLGNRYDIPRLVKELEIHEIIIAMPSVSRTEISEIINLAKATGAKLKI 242 A K L ++G+PVLG R DIPR+VK I +IIIAMPS S I EI+ + + TG LKI Sbjct: 181 ATKQRLQLMGIPVLGTRRDIPRVVKNHNIDKIIIAMPSASGDVIREIVGICEKTGVDLKI 240 Query: 243 IPALNDLIAGKISVKKLRDVSVEDLLGREPIVADMNSILGYVHNKTVLVTGAGGSIGSEL 302 +P + D+++GK+ K++R V VEDLLGRE + D+ + GY+ + VL+TG GGSIGSEL Sbjct: 241 MPGVFDVVSGKVDTKEIRQVQVEDLLGREAVTVDLEDVAGYLTGEAVLITGGGGSIGSEL 300 Query: 303 CRQISPFAPDKLLILGHGENSIYTIEMELRKSFPDLNIVTVIADVQDRTRMMEVFQSHSP 362 CRQ++ F P KL+I+GHGENS++ IE ELR P L++VT I D++DR ++ VFQ + P Sbjct: 301 CRQVARFNPAKLVIVGHGENSVFDIEQELRSENPGLDVVTEILDIKDREKVHLVFQRYKP 360 Query: 363 XXXXXXXXXXXXPLMERNPSEAIKNNVFGTRNVADCADKYGAERFVLISSDKAVNPTSVM 422 PLME+NP EA+KNN+ GT N+A+ AD + FVLIS+DKAVNPTS+M Sbjct: 361 GVVFHAAAHKHVPLMEKNPEEAMKNNIMGTSNLAEAADAAKVKTFVLISTDKAVNPTSIM 420 Query: 423 GATKRIAEMYVQSLNTSSPTKFSAVRFGNVLGSRGSVIPAFKQQIAAGGPVTVTHPEMVR 482 GATKR+AEM +QS++ S TK+ AVRFGNVLGSRGSVIP FK+QIA GGPVTVTHP+MVR Sbjct: 421 GATKRVAEMVIQSMDKRSDTKYVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTVTHPDMVR 480 Query: 483 YFMTIPEAVQLVIQSGSFANGGEVFVLDMGQPVRILTLAEDLITLSGYEPYKDIEITFSG 542 YFMTIPEA QLVIQ+GS A GGE+F+LDMGQPV+IL LA DLI LSG+EP DI+I F+G Sbjct: 481 YFMTIPEASQLVIQAGSMAQGGEIFILDMGQPVKILDLARDLIRLSGFEPDVDIKIKFTG 540 Query: 543 IREGEKLYEELLTAEENLGSTRHNRIFIGRPNVLSQNQLELEFKRLERVLSEDGDAI--R 600 +R GEKL+EELLTAEE +T+H RIF+ +PN ++ +QLE L ++ E G + Sbjct: 541 MRPGEKLFEELLTAEEGTSATKHKRIFVAKPNNINVSQLE----ELIHLIRERGSYLTRE 596 Query: 601 EVINQIVPMQP 611 EV+ Q+ + P Sbjct: 597 EVMGQLQAIVP 607 >B8FWK8.1 B8FWK8_DESHD Polysaccharide biosynthesis protein CapD Length = 610 Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust. Identities = 302/600 (50%), Positives = 408/600 (68%), Gaps = 12/600 (2%) Query: 20 LIDLAIIWFSIVTSYMFRFS----KGIPDEYTLQMLVFGLIATVTFGGSLIYFGLYRRLW 75 +ID +I ++ S+ RF+ IP+EY L + AT+ + FGLY +LW Sbjct: 2 VIDAVLINLAVFLSFYIRFAVDGDGTIPEEYLLTLTHSAWTATLIYLSVFYIFGLYNKLW 61 Query: 76 QYASIDEIISVFKAIVVGAVLSFVAAFIILPERVPLSIEVRAMETILLLVGGVRFCWRVF 135 QYASI E+IS+ A+ V A + + I P R P ++ + L L+GG RF WR+ Sbjct: 62 QYASIGELISIIFAVTVAAAGTITVVYFIAPMRFPHTVSALMWFSTLFLIGGSRFIWRIL 121 Query: 136 RNDRINSK--DTETHTLIVGAGDCGILIAREMMGPSFAHTRIVGFIDDSADKYHLSILGV 193 +++ ++ LI+GAGD G++ ARE+ ++ R VG+IDD+A K L ++G+ Sbjct: 122 QDNIFTPHVPGSQNQVLIIGAGDAGVMAARELKNKNYREGRPVGYIDDAATKQRLQLMGI 181 Query: 194 PVLGNRYDIPRLVKELEIHEIIIAMPSVSRTEISEIINLAKATGAKLKIIPALNDLIAGK 253 PVLG R DIPR+VK I +IIIAMPS S I EI+ + + TG LKI+P + D+++GK Sbjct: 182 PVLGTRRDIPRVVKNHNIDKIIIAMPSASGDVIREIVGICEKTGVDLKIMPGVFDVVSGK 241 Query: 254 ISVKKLRDVSVEDLLGREPIVADMNSILGYVHNKTVLVTGAGGSIGSELCRQISPFAPDK 313 + K++R V VEDLLGRE + D+ + GY+ + VL+TG GGSIGSELCRQ++ F P K Sbjct: 242 VDTKEIRQVQVEDLLGREAVTVDLEDVAGYLAGEAVLITGGGGSIGSELCRQVARFNPAK 301 Query: 314 LLILGHGENSIYTIEMELRKSFPDLNIVTVIADVQDRTRMMEVFQSHSPXXXXXXXXXXX 373 L+I+GHGENS++ IE ELR P L++VT I D++DR ++ VFQ + P Sbjct: 302 LVIVGHGENSVFDIEQELRSENPGLDVVTEILDIKDREKVHLVFQRYKPGVVFHAAAHKH 361 Query: 374 XPLMERNPSEAIKNNVFGTRNVADCADKYGAERFVLISSDKAVNPTSVMGATKRIAEMYV 433 PLME+NP EA+KNN+ GT N+A+ AD + FVLIS+DKAVNPTS+MGATKR+AEM + Sbjct: 362 VPLMEKNPEEAMKNNIMGTSNLAEAADAAKVKTFVLISTDKAVNPTSIMGATKRVAEMVI 421 Query: 434 QSLNTSSPTKFSAVRFGNVLGSRGSVIPAFKQQIAAGGPVTVTHPEMVRYFMTIPEAVQL 493 QS++ S TK+ AVRFGNVLGSRGSVIP FK+QIA GGPVTVTHP+MVRYFMTIPEA QL Sbjct: 422 QSMDKRSDTKYVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTVTHPDMVRYFMTIPEASQL 481 Query: 494 VIQSGSFANGGEVFVLDMGQPVRILTLAEDLITLSGYEPYKDIEITFSGIREGEKLYEEL 553 VIQ+GS A GGE+F+LDMGQPV+IL LA DLI LSG+EP DI+I F+G+R GEKL+EEL Sbjct: 482 VIQAGSMAQGGEIFILDMGQPVKILDLARDLIRLSGFEPDVDIKIKFTGMRPGEKLFEEL 541 Query: 554 LTAEENLGSTRHNRIFIGRPNVLSQNQLELEFKRLERVLSEDGDAI--REVINQIVPMQP 611 LTAEE +T+H RIF+ +PN ++ +QLE L ++ E G + EV+ Q+ + P Sbjct: 542 LTAEEGTSATKHKRIFVAKPNNINVSQLE----ELIHLIRERGSYLTREEVMGQLQAIVP 597 >C0ZHW1.1 C0ZHW1_BREBN Putative polysaccharide biosynthesis protein Length = 631 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 291/617 (47%), Positives = 405/617 (65%), Gaps = 25/617 (4%) Query: 9 MTAKTRVYLLFLIDLAII----WFSIVTSYMFRFSKGIPDEYTLQMLVFGLIATVTFGGS 64 M+ + R + L L D II W + + + F F++ I D + +++ ++ VT Sbjct: 1 MSYRKRRFWLSLSDAGIISLAVWLACLVRFDFSFTE-ISDYQPMYLMIGHVLFVVT---G 56 Query: 65 LIYFGLYRRLWQYASIDEIISVFKAIVVGAVLSFVAAFIILPE--------RVPLSIEVR 116 + + LYR +++Y S+ E++S I+ S +A +++L R P S+ + Sbjct: 57 MHFAQLYRPVFRYVSVRELVS----IIFATSFSVLALYLVLKMTYLLGWSVRFPTSLFLM 112 Query: 117 AMETILLLVGGVRFCWRVFRNDRINSKDTETHTLIVGAGDCGILIAREMMGPSFAHTRIV 176 + +LL + G RF W+ + +R TLI+GAG G+L+AREM + R V Sbjct: 113 TLAFVLLGITGSRFVWKWWYEEREKRTQDRRRTLIIGAGSAGVLVAREMKTSPLSELRPV 172 Query: 177 GFIDDSADKYHLSILGVPVLGNRYDIPRLVKELEIHEIIIAMPSVSRTEISEIINLAKAT 236 FIDD K +L + G+PV+GNR D+ R+V+ L I +I+IAMPS SR I EI ++ K T Sbjct: 173 AFIDDEPSKQNLRVYGLPVVGNRADVVRVVQRLSISDIVIAMPSASRQTIKEIFDICKTT 232 Query: 237 GAKLKIIPALNDLIAGKISVKKLRDVSVEDLLGREPIVADMNSILGYVHNKTVLVTGAGG 296 A +KI+P + D+I+GKI++ +RDV++EDLLGREP+ ++ I GY+ + VLVTGAGG Sbjct: 233 RASVKILPHVADIISGKITMNMIRDVALEDLLGREPVQVNLEEITGYLRQQVVLVTGAGG 292 Query: 297 SIGSELCRQISPFAPDKLLILGHGENSIYTIEMELRKSFPDLNIVTVIADVQDRTRMMEV 356 SIGSELCRQI+ F P KLL+LG+ EN I+ + +EL + FP+ V++IAD++DR R+ + Sbjct: 293 SIGSELCRQIARFGPRKLLLLGNEENGIFEMGLELSRLFPEQETVSLIADIRDRQRISSI 352 Query: 357 FQSHSPXXXXXXXXXXXXPLMERNPSEAIKNNVFGTRNVADCADKYGAERFVLISSDKAV 416 + P PLME NP EA+KNN+ GT+NVA+CA + F+LIS+DKAV Sbjct: 353 MHEYCPAVVFHAAAHKHVPLMENNPCEALKNNILGTKNVAECALETSVSHFILISTDKAV 412 Query: 417 NPTSVMGATKRIAEMYVQSLNTSSPTKFSAVRFGNVLGSRGSVIPAFKQQIAAGGPVTVT 476 NPTSVMGATKRIAE+ +Q N T+F+AVRFGNVLGSRGSV+P F QI AGGP+T+T Sbjct: 413 NPTSVMGATKRIAELLIQGYNHFGLTRFAAVRFGNVLGSRGSVVPVFLNQIRAGGPITIT 472 Query: 477 HPEMVRYFMTIPEAVQLVIQSGSFANGGEVFVLDMGQPVRILTLAEDLITLSGYEPYKDI 536 HP+M R+FMTIPEA QLVIQ+G+ A GGE+F+LDMG+PV+I+ +A DLI L+G EP KDI Sbjct: 473 HPDMERFFMTIPEAAQLVIQAGALAQGGEIFILDMGKPVKIVDMALDLIRLAGLEPGKDI 532 Query: 537 EITFSGIREGEKLYEELLTAEENLGSTRHNRIFIGRPNVLSQNQLELEFKRLERVLS--- 593 I F+GIR GEKLYEE+LTAEE L ST HNRIFIG+P S N+L RLE++ Sbjct: 533 SIVFTGIRSGEKLYEEILTAEEGLSSTCHNRIFIGKPLDFSWNELLAGIARLEQIADKGA 592 Query: 594 --EDGDAIREVINQIVP 608 ED +I E++ IVP Sbjct: 593 TMEDKQSIIEILQGIVP 609 >Q9K6L1.1 Q9K6L1_BACHD Capsular polysaccharide biosynthesis Length = 608 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 294/604 (48%), Positives = 396/604 (65%), Gaps = 30/604 (4%) Query: 9 MTAKTRVYLLFLIDLAIIWFSIVTSYMFRFSKGIPDEYTLQMLVFGLIATVTFGGSLIYF 68 M+ K R+ LL D I+ FSI FS G T ++F +++VT S +F Sbjct: 1 MSYKKRIALLATNDSVIVIFSIYVCNFLMFSSG-----TFSSILF--VSSVTLLASHHFF 53 Query: 69 G----LYRRLWQYASIDEIISVFKAIVVGAVLSFVAAFIILPERVPLSIEVRAMETI--- 121 LY+R+WQYAS++E+ KAI++ S V I+ ++ VR + T Sbjct: 54 AQKLKLYKRVWQYASMNEL----KAIIMAVTFSIVTVAIVQLLFFQ-TVYVRTLFTTWMM 108 Query: 122 -LLLVGGVRFCWRVFRNDRINSKDTETHTLIVGAGDCGILIAREMMGPSFAHTRIVGFID 180 +LL+GG RF WR++R+ + K +T TLI+GAG G ++AR+++ A R V F+D Sbjct: 109 HMLLIGGSRFSWRLYRDTYMKPKLNKTKTLIIGAGSAGSMVARQLLQNQEAELRPVAFVD 168 Query: 181 DSADKYHLSILGVPVLGNRYDIPRLVKELEIHEIIIAMPSVSRTEISEIINLAKATGAKL 240 D K++L I+G+PVLG D+ +V E I IIIA+PS+SR E+++I ++ T K Sbjct: 169 DDISKHNLEIMGIPVLGAVKDMEGIVAEHSIEHIIIAIPSLSRVELNDIFHVCSKTKIKT 228 Query: 241 KIIPALNDLIAGKISVKKLRDVSVEDLLGREPIVADMNSILGYVHNKTVLVTGAGGSIGS 300 +I+P + D++ G++ V + RDV VEDLLGR+P+ D+N I Y+ N+TVLVTGAGGSIGS Sbjct: 229 QILPKIEDIMMGRVEVAQFRDVEVEDLLGRDPVELDINGIAQYITNRTVLVTGAGGSIGS 288 Query: 301 ELCRQISPFAPDKLLILGHGENSIYTIEMELRKSFPDLNIVTVIADVQDRTRMMEVFQSH 360 E+CRQI+ F P+ L++LGHGENSIY+IEMELR P++NIVT IAD+QDR +M + Sbjct: 289 EICRQIACFQPETLVLLGHGENSIYSIEMELRDKLPNINIVTEIADIQDREKMFSIMDDR 348 Query: 361 SPXXXXXXXXXXXXPLMERNPSEAIKNNVFGTRNVADCADKYGAERFVLISSDKAVNPTS 420 P PLMERNP EA+KNNV GT+N A+ A FV+IS+DKAVNPTS Sbjct: 349 KPHVVFHAAAHKHVPLMERNPEEAVKNNVLGTKNTAEAASAANVNTFVMISTDKAVNPTS 408 Query: 421 VMGATKRIAEMYVQSLNTSSPTKFSAVRFGNVLGSRGSVIPAFKQQIAAGGPVTVTHPEM 480 VMGATKRIAEM +Q ++ S T+F AVRFGNVLGSRGSVIP FK+QI GGPVTVT PEM Sbjct: 409 VMGATKRIAEMIIQHMDMISDTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTDPEM 468 Query: 481 VRYFMTIPEAVQLVIQSGSFANGGEVFVLDMGQPVRILTLAEDLITLSGYEPYKDIEITF 540 VRYFMTIPEA +LV+Q+G+ A+GGEVFVLDMG+PV+I+ LA +LI LSGY +I I F Sbjct: 469 VRYFMTIPEASRLVLQAGALADGGEVFVLDMGEPVKIVDLARNLIRLSGYTE-DEIPIVF 527 Query: 541 SGIREGEKLYEELLTAEENLGSTRHNRIFIGRPNVLSQN---QLELEFKRLERVLSEDGD 597 +G+R GEKL+EELL E + +I+ G+ + N QL EF + E+ D Sbjct: 528 TGMRPGEKLFEELLGENEVHSEQVYPKIYRGKTPPVEINVIYQLTDEFAKKEK------D 581 Query: 598 AIRE 601 A+RE Sbjct: 582 ALRE 585 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,408,856,888 Number of extensions: 142430982 Number of successful extensions: 409543 Number of sequences better than 1.0e-05: 1417 Number of HSP's gapped: 405729 Number of HSP's successfully gapped: 1425 Length of query: 618 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 476 Effective length of database: 1,722,912,073 Effective search space: 820106146748 Effective search space used: 820106146748 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)