BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0420.0014.p (237 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KKQ9.1 B3KKQ9_9BACI Tetratricopeptide TPR_2 repeat protein 315 2e-84 B1DFD7.1 B1DFD7_9BACL Putative uncharacterized protein 295 2e-78 B7GKM2.1 B7GKM2_ANOFW Uncharacterized conserved protein, contain... 162 2e-38 B7R9X5.1 B7R9X5_9THEO Putative uncharacterized protein 161 6e-38 C0Z9E6.1 C0Z9E6_BREBN Putative uncharacterized protein 160 6e-38 >B3KKQ9.1 B3KKQ9_9BACI Tetratricopeptide TPR_2 repeat protein Length = 231 Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 144/218 (66%), Positives = 181/218 (83%) Query: 6 ELIPLYTIKVICCNCEQEFTTSRVRPSLKKAVRRDADFCSYYKNENPDYYVVRVCPSCGF 65 +L PLY+IKV C +CE E+ TSRVRPS KKA R D DFC+YYK+ENPD+YVVRVCP CGF Sbjct: 2 KLEPLYSIKVACAHCEHEYLTSRVRPSFKKAFRTDTDFCAYYKSENPDFYVVRVCPECGF 61 Query: 66 ASTENSADKLADWQRKSFREQVGSRWVPRDFGDKRSWEIALETYKLALLCAQSIKDKDRI 125 ASTE+S KL + Q+ F +QVG RW RD G R+ E ALE+YKLALLCAQ I ++DRI Sbjct: 62 ASTEHSTLKLNERQKTLFYDQVGCRWEKRDMGGPRNLEDALESYKLALLCAQVIGERDRI 121 Query: 126 IASLLHHIAWMYRYQGDIEQEQRFLRYSLDMYIKVYENDGIGGNDARLMYLIGELNRRIG 185 +ASLLHHIAW+YRYQG+ +QE+RFL YSL+ YI+V+E +G+G NDARL+YLIGE++RR+G Sbjct: 122 VASLLHHIAWLYRYQGNEDQEKRFLGYSLESYIRVFELEGVGANDARLLYLIGEIHRRLG 181 Query: 186 EFSNAVKWFSRLINDQKIMDAAMIRAAREQWALLREQM 223 +F AV+WFSR++ D+KIMDAAMIRA+REQW L+ EQ+ Sbjct: 182 QFQEAVQWFSRVVQDEKIMDAAMIRASREQWKLIAEQI 219 >B1DFD7.1 B1DFD7_9BACL Putative uncharacterized protein Length = 241 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 133/229 (58%), Positives = 176/229 (76%), Gaps = 1/229 (0%) Query: 9 PLYTIKVICCNCEQEFTTSRVRPSLKKAVRRDADFCSYYKNE-NPDYYVVRVCPSCGFAS 67 PLY K+ C CE FTTSRVRPS KKAV D+DFC YY+ E NP++YVVRVCP+CGFA+ Sbjct: 3 PLYQTKMNCICCETIFTTSRVRPSFKKAVAIDSDFCGYYRAEANPEFYVVRVCPTCGFAT 62 Query: 68 TENSADKLADWQRKSFREQVGSRWVPRDFGDKRSWEIALETYKLALLCAQSIKDKDRIIA 127 TEN +L + QRK + EQ+GSRW P D+G +R A++ YKLALL AQ++++K R+IA Sbjct: 63 TENGTQRLTERQRKEYLEQIGSRWTPYDYGGERDAAQAMKVYKLALLSAQAVEEKPRVIA 122 Query: 128 SLLHHIAWMYRYQGDIEQEQRFLRYSLDMYIKVYENDGIGGNDARLMYLIGELNRRIGEF 187 +LHHIAW+YRY+G+ ++E RF+R++L YIKVYE +G N+A+LMY+IGELNRR GE Sbjct: 123 GILHHIAWLYRYEGNQQEELRFMRFALQAYIKVYEEEGSQLNNAKLMYIIGELNRRTGEL 182 Query: 188 SNAVKWFSRLINDQKIMDAAMIRAAREQWALLREQMNGGEPEEDGLPSG 236 S AVKWFSR+++D++IMD AMIR +REQW L+REQ+ G+P +G Sbjct: 183 SEAVKWFSRIVSDKRIMDEAMIRRSREQWQLIREQLEQGQPVSPAAATG 231 >B7GKM2.1 B7GKM2_ANOFW Uncharacterized conserved protein, contains two CXXC motifs Length = 227 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 132/224 (58%), Gaps = 6/224 (2%) Query: 10 LYTIKVICCNCEQEFTTSRVRPSLKKAVRRDADFCSYYKNE--NPDYYVVRVCPSCGFAS 67 LY V C C+Q +TT +VR + V+ D DFCSYY +E NP Y V VCP CGFA+ Sbjct: 4 LYDRTVTCLVCKQTYTTKKVRSRFIRPVQHDTDFCSYYASEEANPLLYYVHVCPHCGFAA 63 Query: 68 TENSADKLADWQRKSFREQVGSRWVPRDFGDKRSWEIALETYKLALLCAQSIKDKDRIIA 127 TE + ++ ++ + + W +++G R++ A++TYKL + A K+K +A Sbjct: 64 TEEFSTYFPPQTLETIQQNICANWRGKNYGGARTFAEAIDTYKLGIYSAILKKEKHIALA 123 Query: 128 SLLHHIAWMYRYQGDIEQEQRFLRYSLDMYIKVYENDGI---GGNDARLMYLIGELNRRI 184 L +AW+YR + E+EQRF+R +L+ YI YE D ++ RL+YLIGEL RRI Sbjct: 124 GLYMRLAWLYRSKQQHEEEQRFMRLALEQYIASYETDDFIHTHMSEVRLLYLIGELYRRI 183 Query: 185 GEFSNAVKWFSRLINDQK-IMDAAMIRAAREQWALLREQMNGGE 227 G+ A+ +FSR+I +K ++ ++ A ++W +RE+ G + Sbjct: 184 GKEKQAIIYFSRVIARKKETIEKGIVNMAYDRWQEIREEKKGAQ 227 >B7R9X5.1 B7R9X5_9THEO Putative uncharacterized protein Length = 220 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 132/215 (61%), Gaps = 2/215 (0%) Query: 10 LYTIKVICCNCEQEFTTSRVRPSLKKAVRRDADFCSYYKNE-NPDYYVVRVCPSCGFAST 68 LY K +C C+QEFT +RVR S K R DF + YK++ NP +Y V VCP+CG+A+ Sbjct: 6 LYDKKTVCPVCKQEFTYTRVRTSQLKVEERGRDFYTKYKDDINPFFYEVIVCPNCGYAAL 65 Query: 69 ENSADKLADWQRKSFREQVGSRWVPRDFGDKRSWEIALETYKLALLCAQSIKDKDRIIAS 128 E+ +K+ + +R+ V +WV R+F +R+ + ALE Y L+L C+Q +DK + A Sbjct: 66 ESEFEKITNDKREKILSLVSEKWVKREFSGERTPQKALEAYLLSLYCSQIKEDKPIVFAK 125 Query: 129 LLHHIAWMYRYQGDIEQEQRFLRYSLDMYIKVYENDGIGGNDARLMYLIGELNRRIGEFS 188 IAW+YR GD E+++L+++LD Y+K Y + + L+Y+IGELNR +G Sbjct: 126 TCLRIAWIYRILGDKANEEKYLKHALDSYVKAYSGSDVYEEEILLIYMIGELNRMLGNKE 185 Query: 189 NAVKWFSRLIND-QKIMDAAMIRAAREQWALLREQ 222 A+KW++++I+ ++ ++ AR+ W L+E+ Sbjct: 186 EALKWYNKVIHHPERSRHTMIVELARDGWHSLKEE 220 >C0Z9E6.1 C0Z9E6_BREBN Putative uncharacterized protein Length = 239 Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 133/229 (58%), Gaps = 8/229 (3%) Query: 10 LYTIKVICCNCEQEFTTSRVRPSLKKAVRRDADFCSYYKNE--NPDYYVVRVCPSCGFAS 67 LY C +C+ F+T R+R V RD+DF + +K + NP Y V VCP CGFA Sbjct: 8 LYDKTSSCRHCQATFSTKRIRSGTLTMVNRDSDFYTTFKEQSLNPILYTVNVCPECGFAF 67 Query: 68 TENSADKLADWQRKSFREQVGSRWVPRDFGDKRSWEIALETYKLALLCAQSIKDKDRIIA 127 T+ DKLA WQ++ EQ+ S+W P+DFG R A+ +YKLA+ A+ + A Sbjct: 68 TDQFRDKLAPWQKQIVDEQISSKWKPKDFGKVRHVPEAIVSYKLAIYAAEITDQPHSVKA 127 Query: 128 SLLHHIAWMYRYQGDIEQEQRFLRYSLDMYIKVY-ENDGIGGN----DARLMYLIGELNR 182 L +AW+YRYQ ++ +E RF+ +++ Y + Y +D G+ + RL+YLIGEL R Sbjct: 128 GLYLRLAWLYRYQKNVTEEMRFIDMAVEEYEQSYIHSDYTRGDKEMTEVRLLYLIGELYR 187 Query: 183 RIGEFSNAVKWFSR-LINDQKIMDAAMIRAAREQWALLREQMNGGEPEE 230 R+ +F A+K+F + L +++ +IR A++QW L RE+ + E+ Sbjct: 188 RLEKFDLAIKYFGKALAFRNHTIESGIIRMAQDQWQLAREEFKEKKNEQ 236 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.137 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,469,902,700 Number of extensions: 58235523 Number of successful extensions: 127568 Number of sequences better than 1.0e-05: 74 Number of HSP's gapped: 127464 Number of HSP's successfully gapped: 74 Length of query: 237 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 105 Effective length of database: 1,817,122,223 Effective search space: 190797833415 Effective search space used: 190797833415 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)