BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0420.0011.p (599 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DFE0.1 B1DFE0_9BACL Oligoendopeptidase, pepF/M3 family 693 0.0 C0Z6G7.1 C0Z6G7_BREBN Putative oligoendopeptidase 675 0.0 Q2B1A7.1 Q2B1A7_9BACI YusX 655 0.0 Q67MX1.1 Q67MX1_SYMTH Oligoendopeptidase F 652 0.0 A7Z8L3.1 A7Z8L3_BACA2 YusX 646 0.0 >B1DFE0.1 B1DFE0_9BACL Oligoendopeptidase, pepF/M3 family Length = 594 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/591 (57%), Positives = 422/591 (71%), Gaps = 5/591 (0%) Query: 7 LTWDLDSIFPGGSASAEFEHFLKQLETDIGVLDQQVAAAASPANIESTRQLDDVIALLQS 66 + WDL++ + GGS SA F L +E D+ LD+ + S +++E+ ++++D A+LQS Sbjct: 8 MKWDLETFYEGGSGSAAFASELVGIEKDVAELDRLL----SDSSLEAKKKIEDTTAILQS 63 Query: 67 CSGRLVQASEFAGCLGAQNQQDKGAVRLSSKVAGLRADFEGVSSKFDDVLRQTSDEVWQE 126 RL Q+ F CL AQN +D A LS +V + A G +++D+ LRQ DE W Sbjct: 64 VLIRLRQSESFVECLQAQNMKDSAASGLSDRVKTISAKLLGALTRYDNELRQIGDEEWAG 123 Query: 127 WMARPEIAPLKFVLSESRDLAREKMSPELEAFALALAVDGYHGWSEHYETIVGSIQIPYE 186 ++ + + F LSE R+LA+EK++PELEA A LAVDGYHGW Y+ IV + Sbjct: 124 IVSDGPLGEIAFSLSERRELAKEKLAPELEALAGDLAVDGYHGWGALYDLIVSRAKFTDI 183 Query: 187 DEEGT-RLLSAGQAFNKLDDPDPKVREAMFGKWEEAWGSAADYCADTLNHLAGFRLNLYK 245 E G ++LSAGQ FN+L D D VR F +WE WG AA+ CAD LN LAGFRL LY Sbjct: 184 GENGEEKVLSAGQMFNRLSDGDRSVRIRAFAEWEREWGDAAELCADALNRLAGFRLKLYG 243 Query: 246 GRGWEDVLKEPLAINRMSHKSLDTMWDVITKAKPALVSYLSRKAKLLGLESLSWVDVEAP 305 RGWE VLKEPL INRMS + + MW I + KP LV YL RKAKLLGLE L W DV AP Sbjct: 244 KRGWESVLKEPLQINRMSEDTFNAMWSAINEGKPKLVRYLERKAKLLGLEKLDWHDVSAP 303 Query: 306 VGESSGKIPYDQAAKDIVAQFRNFSPKLADFAEHAFDSNWIEVEDRPGKRPGGFCVSFPE 365 +G S+ I +D+ AK IV QFR FSP +ADF+E AF WIE EDR GKRPGGFC SFP+ Sbjct: 304 LGSSARTISFDEGAKFIVEQFRKFSPDMADFSEVAFRDAWIEAEDRAGKRPGGFCTSFPK 363 Query: 366 SKESRIFMTYSGTPSNVSTLAHELGHAYHSYLLEDLPVFNQNYAMNVAETASTFAEVIVA 425 S+++RIFMTYSGT NVSTLAHELGHAYH Y+++DLP +Q YAMNVAETASTFAE+IV+ Sbjct: 364 SRQTRIFMTYSGTADNVSTLAHELGHAYHQYVMDDLPALSQEYAMNVAETASTFAELIVS 423 Query: 426 DAQVKAAASSGEKIALLEAKIQNSVAFFMNIHARFLFETRFYEKRKQGLVNAEELSALMV 485 D+ +K A EK+ LLE KIQN+VAFFMNIHAR LFETRFYE+RKQG+V E+L++LM Sbjct: 424 DSAMKTAVDREEKLGLLEDKIQNAVAFFMNIHARVLFETRFYEERKQGIVPVEKLNSLME 483 Query: 486 EAQKEAFCGILSEYHPHFWASKLHFYITDVPFYNFPYTVGYMFSTGLYKIALQEGTSFAD 545 EAQ+EAF G L E HPHFWASKLHFYIT VPFYNFPYT GY+FS G+Y AL+EG +FA+ Sbjct: 484 EAQREAFSGALGELHPHFWASKLHFYITSVPFYNFPYTFGYLFSAGIYARALEEGPAFAE 543 Query: 546 KYDSLLRDTGIMTLEDLVQKHLGVDLTQPDFWQGAADLIIADINEFMKLTE 596 +Y LLRDTG MT+E+L +KHLGV+L + DFW+ A +L DI+ F++LTE Sbjct: 544 RYVQLLRDTGRMTVEELAKKHLGVNLEEADFWRDAVELTTKDIDLFLELTE 594 >C0Z6G7.1 C0Z6G7_BREBN Putative oligoendopeptidase Length = 596 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/598 (55%), Positives = 415/598 (69%), Gaps = 2/598 (0%) Query: 1 MKQPLSLTWDLDSIFPGGSASAEFEHFLKQLETDIGVLDQQVAAAASPANIESTRQLDDV 60 M + L WD+D IFPGGS S +F FL +E DI L + S A + T +V Sbjct: 1 MTKALPQRWDMDVIFPGGSESEDFRAFLVTVEGDIANLKARFEQ--SGAGLHETAAFKEV 58 Query: 61 IALLQSCSGRLVQASEFAGCLGAQNQQDKGAVRLSSKVAGLRADFEGVSSKFDDVLRQTS 120 +A +QS + R+ QA F CL AQN +D+ A + +V + A F V +++++ L Sbjct: 59 VAQVQSIAVRVRQAGAFISCLTAQNVKDEPAKLMGGRVKSISAAFGAVLTRWEEQLLAID 118 Query: 121 DEVWQEWMARPEIAPLKFVLSESRDLAREKMSPELEAFALALAVDGYHGWSEHYETIVGS 180 + W+ +A E+ L FVL+E R A+EK+SPE E A LAVDGYH W + Y +VG Sbjct: 119 EAAWENLLADEELQSLAFVLNERRRRAQEKLSPEQEVLANDLAVDGYHAWQDLYNAVVGR 178 Query: 181 IQIPYEDEEGTRLLSAGQAFNKLDDPDPKVREAMFGKWEEAWGSAADYCADTLNHLAGFR 240 + I E T+ LS GQA N + PD VR +F KW EAWG + CA LNHL GFR Sbjct: 179 MSIEVEVNGETKQLSVGQASNLMSSPDRAVRSHVFEKWNEAWGKETELCAQALNHLGGFR 238 Query: 241 LNLYKGRGWEDVLKEPLAINRMSHKSLDTMWDVITKAKPALVSYLSRKAKLLGLESLSWV 300 L+LY+ RGW+ VL+EPL I RM K+LD MW I K LV+YL RKAKLLG++ LSW Sbjct: 239 LSLYRHRGWDSVLREPLDIGRMQEKTLDAMWQAIDNRKDRLVAYLERKAKLLGVDKLSWY 298 Query: 301 DVEAPVGESSGKIPYDQAAKDIVAQFRNFSPKLADFAEHAFDSNWIEVEDRPGKRPGGFC 360 DV APVG ++ YD+AA IV F F+P +A+FA+ AFD WIE EDRPGKRPGGFC Sbjct: 299 DVGAPVGNVHKEVSYDEAAALIVEHFNRFNPSMAEFAQKAFDEGWIEAEDRPGKRPGGFC 358 Query: 361 VSFPESKESRIFMTYSGTPSNVSTLAHELGHAYHSYLLEDLPVFNQNYAMNVAETASTFA 420 SFP SK+SR+FMTY+G+ SNVSTLAHELGHAYH ++ DLP NQNYAMNVAETASTFA Sbjct: 359 TSFPVSKQSRVFMTYAGSASNVSTLAHELGHAYHQQVMWDLPALNQNYAMNVAETASTFA 418 Query: 421 EVIVADAQVKAAASSGEKIALLEAKIQNSVAFFMNIHARFLFETRFYEKRKQGLVNAEEL 480 E+I+ADA VK AA+ EK+ LLE K+Q+ VAFFMNIHARF+FE FYEKRK+GLV+A +L Sbjct: 419 EMILADAAVKNAANDDEKLVLLEDKLQSIVAFFMNIHARFIFEKNFYEKRKEGLVSAADL 478 Query: 481 SALMVEAQKEAFCGILSEYHPHFWASKLHFYITDVPFYNFPYTVGYMFSTGLYKIALQEG 540 LM +AQK+A+ G L++Y PHFWASKLHFYIT PFYNFPYT GY+FS +Y AL+EG Sbjct: 479 DRLMEDAQKQAYNGALADYEPHFWASKLHFYITSYPFYNFPYTFGYLFSMSVYARALEEG 538 Query: 541 TSFADKYDSLLRDTGIMTLEDLVQKHLGVDLTQPDFWQGAADLIIADINEFMKLTEPS 598 SFA KYD+LL+DTG + +EDL +KHLG D+T +FWQ A DL +ADI+EF++LTE + Sbjct: 539 ESFAPKYDALLQDTGRLMVEDLAKKHLGEDMTTVEFWQKAVDLAVADIDEFLRLTEEA 596 >Q2B1A7.1 Q2B1A7_9BACI YusX Length = 598 Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/594 (53%), Positives = 412/594 (69%), Gaps = 6/594 (1%) Query: 6 SLTWDLDSIFPGGSASAEFEHFLKQLETDIGVLDQQVAAAAS--PANIESTRQ-LDDVIA 62 S WDLD F GGS+S +F + Q + ++D+ +A P++ E +Q L ++I Sbjct: 7 SEVWDLDVFFEGGSSSGDFAVHIDQTKQ---LIDEFIALTEGWQPSSAEQDQQTLLNLIG 63 Query: 63 LLQSCSGRLVQASEFAGCLGAQNQQDKGAVRLSSKVAGLRADFEGVSSKFDDVLRQTSDE 122 + + +L QA F CL AQN D A L + V L A F+ + FD+ L SDE Sbjct: 64 KFEGTTKKLRQAGAFVSCLEAQNMADSKANELRAAVTVLSAGFQNALTDFDEKLAGFSDE 123 Query: 123 VWQEWMARPEIAPLKFVLSESRDLAREKMSPELEAFALALAVDGYHGWSEHYETIVGSIQ 182 W++ + ++ L+FVL+E R+ A EK+S + E+ AL +DGYH W + Y+ IVG I+ Sbjct: 124 DWKQLLQADGLSELEFVLTERRERAAEKLSKQEESLINALGIDGYHSWGQMYDVIVGKIR 183 Query: 183 IPYEDEEGTRLLSAGQAFNKLDDPDPKVREAMFGKWEEAWGSAADYCADTLNHLAGFRLN 242 IP+ D+ +LLS GQA NK P+ VR+ +F +WE AW DY A TLNHLAGFRLN Sbjct: 184 IPFSDKGQEQLLSVGQAANKFSSPERSVRKNVFKEWENAWDKEQDYLAKTLNHLAGFRLN 243 Query: 243 LYKGRGWEDVLKEPLAINRMSHKSLDTMWDVITKAKPALVSYLSRKAKLLGLESLSWVDV 302 +YK RGW+DVLKEPL INRM ++LD MW VI+K K LV +L+RKA LLGLE LSW D+ Sbjct: 244 VYKMRGWDDVLKEPLEINRMKKETLDAMWGVISKNKQPLVKFLNRKASLLGLEKLSWYDL 303 Query: 303 EAPVGESSGKIPYDQAAKDIVAQFRNFSPKLADFAEHAFDSNWIEVEDRPGKRPGGFCVS 362 +AP+G + K+PY + A+ I+ F F ++ F++ AF++ WIE EDRPGKRPGGF Sbjct: 304 DAPLGSTETKVPYQEGAEFILDHFSKFGGEMTSFSKMAFENKWIEAEDRPGKRPGGFHTY 363 Query: 363 FPESKESRIFMTYSGTPSNVSTLAHELGHAYHSYLLEDLPVFNQNYAMNVAETASTFAEV 422 FPES +SRIFMTYSGTPSNVSTLAHELGH +H+Y ++DL N+NY+MNVAETASTFAE+ Sbjct: 364 FPESSQSRIFMTYSGTPSNVSTLAHELGHGFHTYAMKDLHPLNRNYSMNVAETASTFAEM 423 Query: 423 IVADAQVKAAASSGEKIALLEAKIQNSVAFFMNIHARFLFETRFYEKRKQGLVNAEELSA 482 IVADA VK AA+ EK+ALLE KIQ SVA MNIHARFLFET FY +RK G+V+ L+ Sbjct: 424 IVADAAVKNAATEEEKLALLEDKIQRSVALLMNIHARFLFETSFYNERKNGMVSGRRLNE 483 Query: 483 LMVEAQKEAFCGILSEYHPHFWASKLHFYITDVPFYNFPYTVGYMFSTGLYKIALQEGTS 542 LM+ AQKEA+ L EYHP FW+SKLHFYIT VPFYNFPYT GY+FS G+Y AL+EG Sbjct: 484 LMLNAQKEAYANALDEYHPSFWSSKLHFYITGVPFYNFPYTFGYLFSLGIYANALEEGKG 543 Query: 543 FADKYDSLLRDTGIMTLEDLVQKHLGVDLTQPDFWQGAADLIIADINEFMKLTE 596 + +KY SLL+DT MT+EDL KHL DLT+PDFW+ A L + D+ EF+ LTE Sbjct: 544 YEEKYISLLKDTASMTVEDLAMKHLNADLTKPDFWEKAVKLCMDDVEEFLNLTE 597 >Q67MX1.1 Q67MX1_SYMTH Oligoendopeptidase F Length = 599 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/595 (53%), Positives = 404/595 (67%) Query: 2 KQPLSLTWDLDSIFPGGSASAEFEHFLKQLETDIGVLDQQVAAAASPANIESTRQLDDVI 61 +QPL+ TWDLD FPGGS+S EF+ FL L D+ Q++ AA P ++ Sbjct: 3 QQPLNQTWDLDVFFPGGSSSPEFKRFLDALTEDVTAFGQRLEAAGVPGTAADLDGWMPLL 62 Query: 62 ALLQSCSGRLVQASEFAGCLGAQNQQDKGAVRLSSKVAGLRADFEGVSSKFDDVLRQTSD 121 Q + R+ QA F CL AQ+ D+GA L +VA +RA ++ D L + Sbjct: 63 DTFQDLTQRIRQAGAFVSCLTAQDMADEGAKLLQGRVAQIRAALGNATTLLDHQLSAMPE 122 Query: 122 EVWQEWMARPEIAPLKFVLSESRDLAREKMSPELEAFALALAVDGYHGWSEHYETIVGSI 181 EV+ ARPE + + L E R A +M P+ E+ A LAVDGYH W + Y +V + Sbjct: 123 EVFAALEARPECEAIAYPLRERRLRAAMRMDPQRESLAGDLAVDGYHAWGQLYGELVARV 182 Query: 182 QIPYEDEEGTRLLSAGQAFNKLDDPDPKVREAMFGKWEEAWGSAADYCADTLNHLAGFRL 241 QIP+E T LSAGQA NKL DPD VR ++ +WE+AW AD LNHLAGFR+ Sbjct: 183 QIPWEAGGRTVHLSAGQAANKLLDPDRAVRVRLWERWEKAWAEQADLIGAALNHLAGFRI 242 Query: 242 NLYKGRGWEDVLKEPLAINRMSHKSLDTMWDVITKAKPALVSYLSRKAKLLGLESLSWVD 301 LYK RGW+ +L EPL NRM ++L+ MWDVI + K V +L+RKA+LLGL+ L+W D Sbjct: 243 QLYKHRGWDSILSEPLENNRMKAETLEVMWDVIDRNKGIFVEFLNRKARLLGLDKLAWHD 302 Query: 302 VEAPVGESSGKIPYDQAAKDIVAQFRNFSPKLADFAEHAFDSNWIEVEDRPGKRPGGFCV 361 V+AP+G + K+ YD+AA+ +V F FSP +A FA AF+ WIE EDRPGKRPGGFC Sbjct: 303 VDAPLGGADTKMTYDEAAEFVVEHFGRFSPDMARFARKAFEERWIEAEDRPGKRPGGFCT 362 Query: 362 SFPESKESRIFMTYSGTPSNVSTLAHELGHAYHSYLLEDLPVFNQNYAMNVAETASTFAE 421 SFP +++SRIFMT+ G NVSTLAHELGHAYH ++ DLP Q YAMNVAETASTFAE Sbjct: 363 SFPLTRQSRIFMTFGGNLDNVSTLAHELGHAYHQSVMNDLPQLAQGYAMNVAETASTFAE 422 Query: 422 VIVADAQVKAAASSGEKIALLEAKIQNSVAFFMNIHARFLFETRFYEKRKQGLVNAEELS 481 ++V+DA +KAA S E++ LL K + +VAFFMNIHARFLFETRFY +R +GLV L+ Sbjct: 423 LLVSDAALKAAGSDEERLVLLAGKAERAVAFFMNIHARFLFETRFYAERAKGLVPVARLN 482 Query: 482 ALMVEAQKEAFCGILSEYHPHFWASKLHFYITDVPFYNFPYTVGYMFSTGLYKIALQEGT 541 LMV+AQKEA+ LSEYHPHFWASKLHFY T PFYNFPYT G++FS+G+Y AL+EG Sbjct: 483 ELMVQAQKEAYRDALSEYHPHFWASKLHFYSTGQPFYNFPYTFGFLFSSGVYARALEEGP 542 Query: 542 SFADKYDSLLRDTGIMTLEDLVQKHLGVDLTQPDFWQGAADLIIADINEFMKLTE 596 +FA +Y LLRDTG M +EDL KHLGVDLT+PDFWQ A D+ +AD+ +F+ LTE Sbjct: 543 AFAQRYVDLLRDTGRMRVEDLAAKHLGVDLTKPDFWQAAVDVSVADVRQFLALTE 597 >A7Z8L3.1 A7Z8L3_BACA2 YusX Length = 593 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/592 (53%), Positives = 402/592 (67%), Gaps = 4/592 (0%) Query: 5 LSLTWDLDSIFPGGSASAEFEHFLKQLETDIGVLDQQVAAAASPANIESTRQLDDVIALL 64 L TWDL+SIF GGS S EF+ ++++L+ + V A P + + +R+L ++I Sbjct: 6 LKETWDLNSIFEGGSRSEEFQQYIQELKNHLSAFQHAVEAFTVPTHADESRELINLIDRF 65 Query: 65 QSCSGRLVQASEFAGCLGAQNQQDKGAVRLSSKVAGLRADFEGVSSKFDDVLRQTSDEVW 124 + + + QA F GCL AQN D+ A +++ L +DF+ DD L + + VW Sbjct: 66 ERSAIMIRQAGAFVGCLQAQNTHDQKANEWRARINQLSSDFKSALVTLDDTLARIDEPVW 125 Query: 125 QEWMARPEIAPLKFVLSESRDLAREKMSPELEAFALALAVDGYHGWSEHYETIVGSIQIP 184 +E + +PE+ L +VL+E RD +EK+S E LAVDGYH W + Y VG ++IP Sbjct: 126 EELLQKPELQDLTYVLNERRDRVKEKLSASEERLIEGLAVDGYHAWGDLYNAAVGRMKIP 185 Query: 185 YEDEEGTRLLSAGQAFNKLDDPDPKVREAMFGKWEEAWGSAADYCADTLNHLAGFRLNLY 244 +ED+E LS GQA N + PD ++R +F + EAW + TLNHLAGFR +Y Sbjct: 186 FEDKE----LSVGQAENMMAHPDRRIRRQVFKELNEAWKGEEELFGSTLNHLAGFRTEIY 241 Query: 245 KGRGWEDVLKEPLAINRMSHKSLDTMWDVITKAKPALVSYLSRKAKLLGLESLSWVDVEA 304 K RGW+ L+EPLAINRM ++LD MW VIT K YL+RKA LLGLE L+W DV+A Sbjct: 242 KARGWKSALEEPLAINRMKKETLDVMWQVITDHKKPFAEYLNRKASLLGLERLNWYDVDA 301 Query: 305 PVGESSGKIPYDQAAKDIVAQFRNFSPKLADFAEHAFDSNWIEVEDRPGKRPGGFCVSFP 364 P+GE+ + +D+AA IV+QF F KL+ F+E AF WIE EDR GKR GGFC SFP Sbjct: 302 PIGEAPKEYTFDEAANLIVSQFSTFGKKLSAFSEKAFRDRWIEAEDRSGKRVGGFCTSFP 361 Query: 365 ESKESRIFMTYSGTPSNVSTLAHELGHAYHSYLLEDLPVFNQNYAMNVAETASTFAEVIV 424 +S ESRIFMT+SG+ SNVSTLAHELGHA+H + + N+ YAMNVAETASTFAE+IV Sbjct: 362 DSGESRIFMTFSGSASNVSTLAHELGHAFHQEAMLQVRQLNRAYAMNVAETASTFAEMIV 421 Query: 425 ADAQVKAAASSGEKIALLEAKIQNSVAFFMNIHARFLFETRFYEKRKQGLVNAEELSALM 484 ADA +K A + EK+ LLE KIQ SVA FMNIHARFLFETRFYE+RKQG+V AE+L+ LM Sbjct: 422 ADAALKQAETKDEKLFLLEDKIQKSVAMFMNIHARFLFETRFYEERKQGVVPAEKLNELM 481 Query: 485 VEAQKEAFCGILSEYHPHFWASKLHFYITDVPFYNFPYTVGYMFSTGLYKIALQEGTSFA 544 AQKEAFC L EYHPHFWASKLHF+IT VPFYNFPYT GY+FS G+Y AL+E F Sbjct: 482 EAAQKEAFCDSLGEYHPHFWASKLHFHITGVPFYNFPYTFGYLFSLGIYARALRENADFE 541 Query: 545 DKYDSLLRDTGIMTLEDLVQKHLGVDLTQPDFWQGAADLIIADINEFMKLTE 596 +KY +LL DT MT+EDL KHLG DLT+ FW+ A L + D+ EF++LTE Sbjct: 542 EKYIALLCDTASMTVEDLAMKHLGADLTERSFWEDAVRLAVQDVQEFLELTE 593 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.133 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,572,151,204 Number of extensions: 147807322 Number of successful extensions: 369565 Number of sequences better than 1.0e-05: 1314 Number of HSP's gapped: 366963 Number of HSP's successfully gapped: 1316 Length of query: 599 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 457 Effective length of database: 1,722,912,073 Effective search space: 787370817361 Effective search space used: 787370817361 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)