BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0415.0007.p (433 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C4FZH7.1 C4FZH7_ABIDE Putative uncharacterized protein 468 e-130 C4G5F3.1 C4G5F3_ABIDE Putative uncharacterized protein 461 e-128 C3WIB5.1 C3WIB5_9FUSO ATPase 437 e-120 Q251R9.1 Q251R9_DESHY Putative uncharacterized protein 432 e-119 B8FZB1.1 B8FZB1_DESHD Putative ATPase 432 e-119 >C4FZH7.1 C4FZH7_ABIDE Putative uncharacterized protein Length = 428 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 229/428 (53%), Positives = 303/428 (70%), Gaps = 3/428 (0%) Query: 5 IVERLVSWKNKPQRMPLVIYGARQVGKTYTALTFGKNHYKNTVYFNMEGSSEIASIFERD 64 I+E+L WK R PL++YGARQ+GKTY+ L FG++ Y N Y N E SSE+ S+FE+D Sbjct: 2 IMEQLKKWKISTSRKPLIMYGARQIGKTYSLLEFGQSEYDNVAYCNFENSSELISVFEKD 61 Query: 65 LNPERIIKELSVKSGQTIFKDDTLIIFDEIQACERALTSLKYFCENEPDYHIIAAGSLLG 124 LNPERII ELS+ TI + TLIIFDEIQ CE+A T LKY E +YHIIAAGSLLG Sbjct: 62 LNPERIINELSILKSITIIPEKTLIIFDEIQGCEKAHTFLKYMNETANEYHIIAAGSLLG 121 Query: 125 VALNREKYSFPVGKVDMMNLYPLDFEEFLWATGHKDMCELIKESYEHSTPLS--LHETAM 182 +ALNR +SFPVGKVD +N+YP+ FEEF+ A G + ++I ++ + +PL+ +H A+ Sbjct: 122 LALNRGNFSFPVGKVDTINMYPMTFEEFIIALGETALRDIIMDASKIFSPLTEAIHTKAL 181 Query: 183 DLYKTYLVVGGMPRAVIEYVDTQDFDFVVAAQKMLNDAYIADMAKYASPQETTKIMAAWA 242 +LY TYL VGG P AV+ Y++ +DF+FV A Q + DAYI+DMAKY++P +T K ++A+ Sbjct: 182 NLYYTYLAVGGYPEAVVRYIEKKDFNFVRAVQGNIADAYISDMAKYSTPSDTVKSISAYN 241 Query: 243 SVPAQLAKENHKFQYKVIKSGARAYEYETPLDWLRTAGMINKCIRITEGKMPLSAYADNN 302 S+PAQLAKEN KF Y VI S ARA +YE+ L WL AG++ KC ++TEG +PL Y D Sbjct: 242 SLPAQLAKENSKFMYSVIGSNARAKDYESALQWLIAAGVVIKCNKVTEGNLPLKIYEDAL 301 Query: 303 SFKVYMMDTGLLCSKFDIAANVILNGPANFNGFKGALAENYIMQALVTNGFTPYYWSSPG 362 SFK+Y D GLL K ++ A I++ + +G LAENY+ + L G PYYW+S Sbjct: 302 SFKMYYSDVGLLSMKSELPAENIVHNLKISDKMRGILAENYVAEELSAKGIIPYYWASTN 361 Query: 363 KAELDFVFQDRQGNIIPLEGKSADNVRAKSLKNYISLYQPPYAIRVSAKNFGFENGLRSI 422 KAE+DFV Q GN IP+E KSADNVR+KSLK Y Y+P ++ R SAKNFGFENG++S+ Sbjct: 362 KAEVDFVIQ-TGGNAIPVEVKSADNVRSKSLKIYSDKYKPEFSFRFSAKNFGFENGIKSV 420 Query: 423 PLYALFCL 430 PLY +F + Sbjct: 421 PLYGVFTV 428 >C4G5F3.1 C4G5F3_ABIDE Putative uncharacterized protein Length = 431 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 221/432 (51%), Positives = 304/432 (70%), Gaps = 3/432 (0%) Query: 1 MERKIVERLVSWKNKPQRMPLVIYGARQVGKTYTALTFGKNHYKNTVYFNMEGSSEIASI 60 M+RKI+ L WK R PL++ GARQVGKTY+ L FG+N+Y+N VYFN E + ++ Sbjct: 1 MDRKIINYLKKWKESFHRKPLILQGARQVGKTYSILEFGRNYYENVVYFNFETNPKLNKT 60 Query: 61 FERDLNPERIIKELSVKSGQTIFKDDTLIIFDEIQACERALTSLKYFCENEPDYHIIAAG 120 FE ++ P+ +I LS S QTI K TLI+FDE+Q CERALTSLKYFCE+ P+YHIIAAG Sbjct: 61 FEENIAPDYLIPILSHISNQTIVKGKTLIVFDEVQLCERALTSLKYFCEDAPEYHIIAAG 120 Query: 121 SLLGVALNREKYSFPVGKVDMMNLYPLDFEEFLWATGHKDMCELIKESYEHST--PLSLH 178 SLLGVA+NREK+SFPVGKVDM LYP+D EEF+ A G + E IK+ + +T P +LH Sbjct: 121 SLLGVAVNREKFSFPVGKVDMKTLYPMDIEEFMLALGEAKLVEQIKKCFADNTAMPSALH 180 Query: 179 ETAMDLYKTYLVVGGMPRAVIEYVDTQDFDFVVAAQKMLNDAYIADMAKYASPQETTKIM 238 ++AM+LY+ YLVVGGMP V++Y +T+D+ V Q+ L +Y+ DM+KY + E K Sbjct: 181 DSAMELYRQYLVVGGMPECVLQYAETKDYILVRHTQETLLASYLNDMSKYNNLNEIKKTR 240 Query: 239 AAWASVPAQLAKENHKFQYKVIKSGARAYEYETPLDWLRTAGMINKCIRITEGKMPLSAY 298 + ++ QL+K+N +FQYK++K G RA E+E ++WL +G+ ++ ++ + K PL Y Sbjct: 241 LTYDNITVQLSKKNTRFQYKLVKKGGRASEFENTIEWLCLSGIASQVYKVLQIKKPLENY 300 Query: 299 ADNNSFKVYMMDTGLLCSKFDIAANVILNGPANFNGFKGALAENYIMQALVTNGFTPYYW 358 D +SFK+Y+ DTGLLC+K D+ A+ IL N FKG +AENY+ L+ N + YYW Sbjct: 301 RDIDSFKIYVSDTGLLCAKKDLRASDILYMSDELNDFKGGMAENYVNIQLLINEYKTYYW 360 Query: 359 SSPGKAELDFVFQDRQGNIIPLEGKSADNVRAKSLKNYISLYQPPYAIRVSAKNFGFENG 418 S AE+DF+ Q R+G IIP+E KSADN +AKSLK Y+ Y+P YAI++SAKNF FE+ Sbjct: 361 ESERGAEVDFIIQ-REGKIIPIEVKSADNTKAKSLKVYMDAYKPEYAIKLSAKNFAFEDN 419 Query: 419 LRSIPLYALFCL 430 + +PLYA FC+ Sbjct: 420 KKIVPLYAAFCI 431 >C3WIB5.1 C3WIB5_9FUSO ATPase Length = 432 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 211/433 (48%), Positives = 292/433 (67%), Gaps = 4/433 (0%) Query: 1 MERKIVERLVSWKNKPQRMPLVIYGARQVGKTYTALTFGKNHYKNTVYFNMEGSSEIASI 60 M R+I E L WKN P R PL++ GARQVGKTY+ L FGK+ Y+N YFN E + ++ Sbjct: 1 MYRRIFEYLKEWKNSPYRKPLILQGARQVGKTYSILNFGKSEYENIAYFNFETNPKLKET 60 Query: 61 FERDLNPERIIKELSVKSGQTIFKDDTLIIFDEIQACERALTSLKYFCENEPDYHIIAAG 120 FE ++ P +I LS QTI K+ TLI FDEIQ CERALTSLKYF E P+YHII AG Sbjct: 61 FEENIEPSYLIPILSRLVDQTIVKEKTLIFFDEIQLCERALTSLKYFQEQAPEYHIIVAG 120 Query: 121 SLLGVALNREKYSFPVGKVDMMNLYPLDFEEFLWATGHKDMCELIKESYEHSTPLS--LH 178 SLLGVA+NRE +SFPVGKVD+ LYP+D EEFL A G + E IK S+ ++PL LH Sbjct: 121 SLLGVAVNRENFSFPVGKVDIKTLYPMDIEEFLLAMGEDKLIEQIKTSFNKNSPLPTILH 180 Query: 179 ETAMDLYKTYLVVGGMPRAVIEYVDTQDFDFVVAAQKMLNDAYIADMAKYASPQETTKIM 238 + AM+ Y+ YL++GGMP V ++ +T+++ + Q+M+ +Y+ DM+KY + E K Sbjct: 181 DLAMEYYRKYLLIGGMPECVAKFKETENYTLIRHTQEMILLSYLNDMSKYNTNNEIKKTR 240 Query: 239 AAWASVPAQLAKENHKFQYKVIKSGARAYEYETPLDWLRTAGMINKCIRITEGKMPLSAY 298 + ++ QL++EN +FQYK++K+G RA E+E ++WL +G+I+K + + K PL Y Sbjct: 241 LVYDNITVQLSRENTRFQYKLVKTGGRASEFENAIEWLNLSGIISKIYCVQDIKKPLENY 300 Query: 299 ADNNSFKVYMMDTGLLCSKFDIAANVILNGPANFNGFKGALAENYIMQALVTNGFTPYYW 358 + ++FK+Y+ D GLLC+K I IL N FKG + ENY+ L N +TPY+W Sbjct: 301 RNIDAFKIYISDVGLLCAKKQIVPEDILYLSDELNDFKGGMTENYVNIHLDINSYTPYFW 360 Query: 359 -SSPGKAELDFVFQDRQGNIIPLEGKSADNVRAKSLKNYISLYQPPYAIRVSAKNFGFEN 417 + G +E+DFV R G IIP+E KS++N R+KS YI Y+P Y+IR+S+KNFG EN Sbjct: 361 KNEKGTSEIDFVIA-RDGKIIPIEVKSSNNTRSKSRDYYIKTYKPEYSIRISSKNFGLEN 419 Query: 418 GLRSIPLYALFCL 430 ++SIPLYA+FCL Sbjct: 420 NIKSIPLYAVFCL 432 >Q251R9.1 Q251R9_DESHY Putative uncharacterized protein Length = 433 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/433 (48%), Positives = 286/433 (66%), Gaps = 6/433 (1%) Query: 1 MERKIVERLVSWKNKPQ-RMPLVIYGARQVGKTYTALTFGKNHYKNTVYFNMEGSSEIAS 59 + RK+ E+LV WK++ + RMPL++YGARQVGKTY G+ H+ NTVY N+E + +A Sbjct: 4 LRRKLEEKLVQWKDRSEGRMPLLLYGARQVGKTYLLAELGEKHFANTVYINLETNPAVAG 63 Query: 60 IFERDLNPERIIKELSVKSGQTIFKDDTLIIFDEIQACERALTSLKYFCENEPDYHIIAA 119 F D+ PER+I+ L Q I TLIIFDEIQ+CERALTSLKYFCE+ P+YH+ AA Sbjct: 64 YFADDITPERLIRFLETTVNQEIIPGKTLIIFDEIQSCERALTSLKYFCESAPEYHVAAA 123 Query: 120 GSLLGVALNREKYSFPVGKVDMMNLYPLDFEEFLWATGHKDMCELIKESYEHSTPLS--L 177 GSLLGVA+NRE YSFPVGKV+ M L+PLDFEEFLWA G + + + I+ + P++ L Sbjct: 124 GSLLGVAINREHYSFPVGKVESMTLFPLDFEEFLWAMGEERLAQEIRRCFSLLEPMAEVL 183 Query: 178 HETAMDLYKTYLVVGGMPRAVIEYVDTQDFDFVVAAQKMLNDAYIADMAKYASPQETTKI 237 H+ A++LY+ YL+VGGMP V + T + +Q + + Y+ADMAKYA +T KI Sbjct: 184 HQKAIELYRYYLIVGGMPACVELFKRTGKLVLIPTSQNEILNNYVADMAKYAGAADTVKI 243 Query: 238 MAAWASVPAQLAKENHKFQYKVIKSGARAYEYETPLDWLRTAGMINKCIRITEGKMPLSA 297 A + S+PAQLAKEN KFQYKV++ G A + +DWL AG++ KC ++ + P++ Sbjct: 244 RACFNSIPAQLAKENKKFQYKVVQKGGSASLFGVSIDWLTQAGIVLKCQKLEQAMNPIAV 303 Query: 298 YADNNSFKVYMMDTGLLCSKFDIAANVILNGPANFNGFKGALAENYIMQALVTNGFTPYY 357 Y D +SFK+YM D GLL K + +L G AN F G++AENY+ QAL NG + YY Sbjct: 304 YVDLSSFKLYMSDVGLLVMKSGLPQQSVLTGEANL--FMGSVAENYVAQALAANGHSLYY 361 Query: 358 WSSPGKAELDFVFQDRQGNIIPLEGKSADNVRAKSLKNYISLYQPPYAIRVSAKNFGFEN 417 W+S AELDFV Q + +II +E K V++KS+ + Y Y IR S KNFG + Sbjct: 362 WTSEHTAELDFVLQKGR-DIIGIEVKKGTKVKSKSINVFSQRYHSAYCIRFSEKNFGKTD 420 Query: 418 GLRSIPLYALFCL 430 L S+PLY FC+ Sbjct: 421 NLWSVPLYGAFCV 433 >B8FZB1.1 B8FZB1_DESHD Putative ATPase Length = 433 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/433 (48%), Positives = 286/433 (66%), Gaps = 6/433 (1%) Query: 1 MERKIVERLVSWKNKPQ-RMPLVIYGARQVGKTYTALTFGKNHYKNTVYFNMEGSSEIAS 59 + RK+ E+LV WK++ + RMPL++YGARQVGKTY G+ H+ NTVY N+E + +A Sbjct: 4 LRRKLEEKLVQWKDRSEGRMPLLLYGARQVGKTYLLAELGEKHFANTVYINLETNPAVAG 63 Query: 60 IFERDLNPERIIKELSVKSGQTIFKDDTLIIFDEIQACERALTSLKYFCENEPDYHIIAA 119 F D+ PER+I+ L Q I TLIIFDEIQ+CERALTSLKYFCE+ P+YH+ AA Sbjct: 64 YFADDITPERLIRFLETTVNQEIIPGKTLIIFDEIQSCERALTSLKYFCESAPEYHVAAA 123 Query: 120 GSLLGVALNREKYSFPVGKVDMMNLYPLDFEEFLWATGHKDMCELIKESYEHSTPLS--L 177 GSLLGVA+NRE YSFPVGKV+ M L+PLDFEEFLWA G + + + I+ + P++ L Sbjct: 124 GSLLGVAINREHYSFPVGKVESMTLFPLDFEEFLWAMGEERLAQEIRRCFSLLEPMAEVL 183 Query: 178 HETAMDLYKTYLVVGGMPRAVIEYVDTQDFDFVVAAQKMLNDAYIADMAKYASPQETTKI 237 H+ A++LY+ YL+VGGMP V + T + +Q + + Y+ADMAKYA +T KI Sbjct: 184 HQKAIELYRYYLIVGGMPACVELFKRTGKLVLIPTSQNEILNNYVADMAKYAGAADTVKI 243 Query: 238 MAAWASVPAQLAKENHKFQYKVIKSGARAYEYETPLDWLRTAGMINKCIRITEGKMPLSA 297 A + S+PAQLAKEN KFQYKV++ G A + +DWL AG++ KC ++ + P++ Sbjct: 244 RACFNSIPAQLAKENKKFQYKVVQKGGSASLFGVSIDWLTQAGIVLKCQKLEQAMNPIAV 303 Query: 298 YADNNSFKVYMMDTGLLCSKFDIAANVILNGPANFNGFKGALAENYIMQALVTNGFTPYY 357 Y D +SFK+YM D GLL K + +L G AN F G++AENY+ QAL NG + YY Sbjct: 304 YVDLSSFKLYMSDVGLLVMKSGLPQQSVLTGEANL--FMGSVAENYVAQALAANGHSLYY 361 Query: 358 WSSPGKAELDFVFQDRQGNIIPLEGKSADNVRAKSLKNYISLYQPPYAIRVSAKNFGFEN 417 W+S AELDFV Q + +II +E K V++KS+ + Y Y IR S KNFG + Sbjct: 362 WTSEHTAELDFVLQKGR-DIIGIEVKKGTKVKSKSINVFSQRYHSAYCIRFSEKNFGKTD 420 Query: 418 GLRSIPLYALFCL 430 L S+PLY FC+ Sbjct: 421 NLWSVPLYGAFCV 433 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,638,697,734 Number of extensions: 109585425 Number of successful extensions: 244323 Number of sequences better than 1.0e-05: 227 Number of HSP's gapped: 243449 Number of HSP's successfully gapped: 227 Length of query: 433 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 294 Effective length of database: 1,751,175,118 Effective search space: 514845484692 Effective search space used: 514845484692 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)