BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0412.0019.p (203 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q8R9X7.1 Q8R9X7_THETN Putative uncharacterized protein 103 7e-21 B7R9S3.1 B7R9S3_9THEO Putative uncharacterized protein 103 7e-21 B0K1U3.1 B0K1U3_THEPX Putative uncharacterized protein 102 1e-20 B7DPU8.1 B7DPU8_9BACL Putative uncharacterized protein 101 4e-20 B0K9W0.1 B0K9W0_THEP3 Putative uncharacterized protein 101 4e-20 >Q8R9X7.1 Q8R9X7_THETN Putative uncharacterized protein Length = 294 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 3/186 (1%) Query: 3 LNNIMISFIGCFIMGLGVNLGYVPVHLFSTGFPGIGVLALYVLDWNTGIVVFALNVPLFL 62 + NI +G FI +G+N+ V L S G GI ++ Y + G +F LN+PL + Sbjct: 18 IKNIFFILVGTFISSIGINMFLVHARLLSGGVSGIALIIQYFTKFPAGYTIFLLNIPLLI 77 Query: 63 LAWKSIGRSFVIQTIIVAGVLSVFLDLLYPIRN--WVHPPLWLGIVVGGAFMGLGAGIVF 120 L++K + F I TII LS FL L Y +RN ++ PL L + GG GLG GIVF Sbjct: 78 LSYKKVNLRFTIFTIIGTAALSFFLVLTYSVRNVLLINDPLLLSL-YGGVLNGLGMGIVF 136 Query: 121 RQGLTSGGVGLLARLIQLHYPKLKMGTIHIGFDFFVLILGAVVMDITTAFYTFLASIIMG 180 ++GG+ +++ +++ Y ++G I +F ++ LGA+ +T+A YT ++ I Sbjct: 137 SNHGSTGGLDIISVIVKKKYDNFEIGRISFTVNFIIVALGAIFFGLTSALYTLVSMYITS 196 Query: 181 RTMDFT 186 +D T Sbjct: 197 YMVDKT 202 >B7R9S3.1 B7R9S3_9THEO Putative uncharacterized protein Length = 294 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 3/186 (1%) Query: 3 LNNIMISFIGCFIMGLGVNLGYVPVHLFSTGFPGIGVLALYVLDWNTGIVVFALNVPLFL 62 + NI +G FI +G+N+ V L S G GI ++ Y + G +F LN+PL + Sbjct: 18 IKNIFFILVGTFISSIGINMFLVHARLLSGGVSGIALIIQYFTKFPAGYTIFLLNIPLLI 77 Query: 63 LAWKSIGRSFVIQTIIVAGVLSVFLDLLYPIRN--WVHPPLWLGIVVGGAFMGLGAGIVF 120 L++K + F I TII LS FL L Y +RN ++ PL L + GG GLG GIVF Sbjct: 78 LSYKKVNLRFTIFTIIGTAALSFFLVLTYSVRNVLLINDPLLLSL-YGGVLNGLGMGIVF 136 Query: 121 RQGLTSGGVGLLARLIQLHYPKLKMGTIHIGFDFFVLILGAVVMDITTAFYTFLASIIMG 180 ++GG+ +++ +++ Y ++G I +F ++ LGA+ +T+A YT ++ I Sbjct: 137 SNHGSTGGLDIISVIVKKKYDNFEIGRISFTVNFIIVALGAIFFGLTSALYTLVSMYITS 196 Query: 181 RTMDFT 186 +D T Sbjct: 197 YMVDKT 202 >B0K1U3.1 B0K1U3_THEPX Putative uncharacterized protein Length = 288 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 3/186 (1%) Query: 3 LNNIMISFIGCFIMGLGVNLGYVPVHLFSTGFPGIGVLALYVLDWNTGIVVFALNVPLFL 62 + NI IG + +G+N+ V L S G GI ++ Y+ + G ++F LN+PL + Sbjct: 12 IKNIFFILIGTLMSAIGINMFIVHAKLLSGGVSGIALIIQYLTKFPAGYIIFLLNIPLLI 71 Query: 63 LAWKSIGRSFVIQTIIVAGVLSVFLDLLYPIRNWVH--PPLWLGIVVGGAFMGLGAGIVF 120 L++K + F I TII LS+FL L Y I+N +H PL L + GG GLG GIVF Sbjct: 72 LSYKKVNLRFTIFTIIGTVSLSLFLVLTYSIKNILHINDPLLLSL-YGGVLNGLGMGIVF 130 Query: 121 RQGLTSGGVGLLARLIQLHYPKLKMGTIHIGFDFFVLILGAVVMDITTAFYTFLASIIMG 180 ++GG+ +++ +++ Y ++G I +FF++ +GAV +T+A YT ++ I Sbjct: 131 SNHGSTGGLDIISVIVKKKYDNFEIGHISFIVNFFIVAIGAVFFGLTSALYTLVSMYITS 190 Query: 181 RTMDFT 186 +D T Sbjct: 191 YMVDKT 196 >B7DPU8.1 B7DPU8_9BACL Putative uncharacterized protein Length = 292 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 99/176 (56%), Gaps = 4/176 (2%) Query: 11 IGCFIMGLGVNLGYVPVHLFSTGFPGIGVLALYVLDWNTGIVVFALNVPLFLLAWKSIGR 70 +G I LG+N V HL GF GI +L LY L G+ F LN+PL ++AW+ G Sbjct: 15 VGALIYALGLNGFLVANHLAEGGFVGISLLLLYKLHVPIGVSFFILNIPLLIVAWRQFGH 74 Query: 71 SFVIQTII-VAGVLSVFLDLLYPIRNWVHPPLWLGIVVGGAFMGLGAGIVFRQGLTSGGV 129 FV++T VAGV S F +L P+R +H PL L + G G+G G++FR G T+GG Sbjct: 75 EFVLKTAAGVAGV-SAFSELTQPVRIPLHDPL-LAALYAGVITGIGLGLIFRSGGTTGGS 132 Query: 130 GLLARLIQLHYPKLKMGTIHIGFDFFVLILGAVVMDITTAFYTFLASIIMGRTMDF 185 ++ARL++ H+ + MG DF V++ +++ A Y+ +A + R +DF Sbjct: 133 DIIARLLR-HHRGIGMGQTLFAIDFIVILSVMMLIGKEVAMYSLVALFVASRVIDF 187 >B0K9W0.1 B0K9W0_THEP3 Putative uncharacterized protein Length = 288 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 103/186 (55%), Gaps = 3/186 (1%) Query: 3 LNNIMISFIGCFIMGLGVNLGYVPVHLFSTGFPGIGVLALYVLDWNTGIVVFALNVPLFL 62 + NI IG + +G+N+ V L S G GI ++ Y+ + G +F LN+PL + Sbjct: 12 IKNIFFILIGTLMSAIGINMFIVHAKLLSGGVSGIALIIQYLTKFPAGYTIFLLNIPLLI 71 Query: 63 LAWKSIGRSFVIQTIIVAGVLSVFLDLLYPIRNWVH--PPLWLGIVVGGAFMGLGAGIVF 120 L++K + F I TII LS+FL L Y I+N +H PL L + GG GLG GIVF Sbjct: 72 LSYKKVNLRFTIFTIIGTVSLSLFLVLTYSIKNILHINDPLLLSL-YGGVLNGLGMGIVF 130 Query: 121 RQGLTSGGVGLLARLIQLHYPKLKMGTIHIGFDFFVLILGAVVMDITTAFYTFLASIIMG 180 ++GG+ +++ +++ Y ++G I +FF++ +GA+ +T+A YT ++ I Sbjct: 131 SNHGSTGGLDIISVIVKKKYDNFEIGHISFIVNFFIVAIGAIFFGLTSALYTLVSMYITS 190 Query: 181 RTMDFT 186 +D T Sbjct: 191 YMVDKT 196 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.332 0.149 0.471 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,252,790,468 Number of extensions: 55696511 Number of successful extensions: 214466 Number of sequences better than 1.0e-05: 1903 Number of HSP's gapped: 212312 Number of HSP's successfully gapped: 1903 Length of query: 203 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 74 Effective length of database: 1,845,385,268 Effective search space: 136558509832 Effective search space used: 136558509832 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 128 (53.9 bits)