BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0412.0016.p (619 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A8FJ71.1 A8FJ71_BACP2 PTS family beta-glucoside (Glc) porter com... 792 0.0 Q65MN1.1 Q65MN1_BACLD Putative uncharacterized protein 791 0.0 B4AK24.1 B4AK24_BACPU Pts system beta-glucoside-specific eiibca ... 790 0.0 Q3XWU6.1 Q3XWU6_ENTFC Sugar-specific permease, EIIA 1 domain:PTS... 657 0.0 B1MZ38.1 B1MZ38_LEUCK Sugar-specific permease, EIIA 1 domain:PTS... 613 e-173 >A8FJ71.1 A8FJ71_BACP2 PTS family beta-glucoside (Glc) porter component IIBCA EC=2.7.1.69 Length = 619 Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/620 (61%), Positives = 484/620 (78%), Gaps = 6/620 (0%) Query: 1 MNYKQTAEEILKHVGGKGNISYFEHCSTRLRFSLIDNTKADVKRLESIPGVIAVKMAGQC 60 M+Y Q A+++L+HVGGK NI++ EHCSTRLRF+LID KADV LE PGVIAV+M+GQC Sbjct: 1 MDYTQVAKDVLQHVGGKENIAHLEHCSTRLRFTLIDQKKADVPALEKTPGVIAVRMSGQC 60 Query: 61 QVVIGNEVVEVYDAVNQLLGXXXXXXXXXXXXXXXXXXXXXXGSVILDFIVGVFQPLIPA 120 QVVIGN+V+EVY V +++G G+V+LDFIVGVFQPL+PA Sbjct: 61 QVVIGNDVIEVYQEVTRIMGSSSSGQVVPSNQPKEKRKV---GTVLLDFIVGVFQPLVPA 117 Query: 121 IAGAGMVKSXXXXXXXMNVLDPNGQTYKILFQIGDAALYFLPLLVAVTTANKLKVSTXXX 180 IAG G++KS + +D GQTY+IL +GDA LYFLPLLVAVTTANKLKV+ Sbjct: 118 IAGGGILKSFLLLFSLLGWMDAKGQTYQILNMVGDAPLYFLPLLVAVTTANKLKVNPLVA 177 Query: 181 XXXXXXXXXPNMTAMLGEGAQLFGLQIKSISYAYQVFPAILTVLLYAQMEKWFTRISPKV 240 PNMTAML EGAQL +K+I+YAYQVFPAIL+VLLYAQMEK+FTR SPK Sbjct: 178 LSAVGALLLPNMTAMLTEGAQLLSFDVKNIAYAYQVFPAILSVLLYAQMEKFFTRFSPKP 237 Query: 241 IRTFFVPMMSLLITVPVSLLFLGPLGYMLGEGFSAIILTLFDKVGWIXXXXXXXXXXXMV 300 IR FFVPMMSL+ITVPV+LL LGPLG+ G+GFS+IIL +F+ VGW+ MV Sbjct: 238 IRIFFVPMMSLVITVPVTLLLLGPLGFTAGQGFSSIILAMFNTVGWVAVAILAAVLPFMV 297 Query: 301 SIGMHKALVPYALTAMGSTGKELLYLPASLAHNIAESGACFAVAVRTKDKALKATAISAG 360 + GMHKA+VPYA+T MG+ GKE LYLPASLAHNIAESGACFAVA+RTKDK L++TAISAG Sbjct: 298 ASGMHKAMVPYAVTTMGTLGKEALYLPASLAHNIAESGACFAVALRTKDKVLRSTAISAG 357 Query: 361 ISALFGITEPALYGVALQNKKVLASVMFSSLVGGAFIGIVGLQAYVLVGPGIASLSMFIS 420 ISA FGITEPALYGV LQNK+VL SVM S VGG FIG++G+QA+VLVGPG+AS+SMFIS Sbjct: 358 ISAFFGITEPALYGVTLQNKRVLGSVMIGSFVGGTFIGLIGIQAFVLVGPGLASMSMFIS 417 Query: 421 EDLPRNIINAVIALVISFVVAFVSTFILGKDNKAKE---EEQQLANPLTAVKEFKSPVIG 477 ++LPRN++ AVI VISF+VAF++ F+LGKD +E ++ A + A + FKSPVIG Sbjct: 418 DELPRNLMFAVIGAVISFIVAFIAAFVLGKDKTVEEKTNDQAAFAEQIGAGETFKSPVIG 477 Query: 478 EVIPLSEVKDEVFSSKAMGEGIAVIPAKGELYAPVDGKIEVVYNRNHAIAMSTANGMELL 537 ++I LSEVKD++FSSK MG+GIA++P++G LYAPVDG++ +++ NHA+ M T G+E+L Sbjct: 478 QMISLSEVKDDIFSSKVMGDGIAIVPSEGALYAPVDGEVTMLFETNHALGMKTDQGVEVL 537 Query: 538 FHVGIDTVRLRGKYFEPQVKAGDEVKAGDLLLKFDLEKIIEEGYDPVTIAIVTNKDKYAV 597 FH+GIDTV+L G+YF+P+V+AG+ V+AGDLL++FD+EKII GYDPVT+A++TN D+Y + Sbjct: 538 FHIGIDTVQLEGQYFQPKVQAGERVQAGDLLIEFDVEKIIAAGYDPVTLAVITNTDQYEI 597 Query: 598 EVAELKQVNRQDTLMVVTAL 617 +V L++VNRQDTLMVVT L Sbjct: 598 KVHPLQEVNRQDTLMVVTQL 617 >Q65MN1.1 Q65MN1_BACLD Putative uncharacterized protein Length = 621 Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/622 (64%), Positives = 488/622 (78%), Gaps = 8/622 (1%) Query: 1 MNYKQTAEEILKHVGGKGNISYFEHCSTRLRFSLIDNTKADVKRLESIPGVIAVKMAGQC 60 MNY QTA ++L+HVGGK NI++ EHCSTRLRF+LID KADV LE PGVIAV+M+GQC Sbjct: 1 MNYIQTARDVLQHVGGKENIAHLEHCSTRLRFTLIDQNKADVPALEKTPGVIAVRMSGQC 60 Query: 61 QVVIGNEVVEVYDAVNQLLGXXXXXXXXXXXXXXXXXXXXXXGSVILDFIVGVFQPLIPA 120 QVVIGN+V+EVY+ + LLG G+V+LDFIVGVFQPL+PA Sbjct: 61 QVVIGNDVIEVYEELTGLLGGALSGQNGSSHQPKEKRKV---GTVLLDFIVGVFQPLVPA 117 Query: 121 IAGAGMVKSXXXXXXXMNVLDPNGQTYKILFQIGDAALYFLPLLVAVTTANKLKVSTXXX 180 IAG G++KS +D GQTY+IL +GDA LYFLPLLVAVTTANKLKV+ Sbjct: 118 IAGGGILKSFLLLFSLFGFIDAKGQTYQILNMVGDAPLYFLPLLVAVTTANKLKVNPLVA 177 Query: 181 XXXXXXXXXPNMTAMLGEGAQLFGLQIKSISYAYQVFPAILTVLLYAQMEKWFTRISPKV 240 PNMTAML EGAQLF +K+I+YAYQVFP IL+VLLYAQMEKWFTRISPK Sbjct: 178 LSAVGALILPNMTAMLTEGAQLFSFDVKNIAYAYQVFPVILSVLLYAQMEKWFTRISPKP 237 Query: 241 IRTFFVPMMSLLITVPVSLLFLGPLGYMLGEGFSAIILTLFDKVGWIXXXXXXXXXXXMV 300 IR FFVPMMSL+ITVP++LL LGP+G+ G+GF+A+IL +FDKVGWI MV Sbjct: 238 IRIFFVPMMSLVITVPITLLLLGPIGFTAGQGFTALILAMFDKVGWIAVAILAAVLPFMV 297 Query: 301 SIGMHKALVPYALTAMGSTGKELLYLPASLAHNIAESGACFAVAVRTKDKALKATAISAG 360 + GMHKA+VPYA+T MG+ GKE LYLPASLAHNIAESGACFA+A+RTKDK L++TAISAG Sbjct: 298 ASGMHKAMVPYAVTTMGNLGKEALYLPASLAHNIAESGACFAIALRTKDKVLRSTAISAG 357 Query: 361 ISALFGITEPALYGVALQNKKVLASVMFSSLVGGAFIGIVGLQAYVLVGPGIASLSMFIS 420 ISA FGITEPALYGV LQNK+VL+SVM S +GG FIG+VGLQA+VLVGPG+AS+SMFIS Sbjct: 358 ISAFFGITEPALYGVTLQNKRVLSSVMIGSFIGGIFIGLVGLQAFVLVGPGLASMSMFIS 417 Query: 421 EDLPRNIINAVIALVISFVVAFVSTFILGKDNKAKEEEQQ-----LANPLTAVKEFKSPV 475 ++LPRN + AVI ISF VAF + FILGKD K +E E++ A L A + FKSPV Sbjct: 418 DELPRNFMFAVIGFAISFAVAFAAAFILGKDRKTEETEKEAEPGAFAEKLGADETFKSPV 477 Query: 476 IGEVIPLSEVKDEVFSSKAMGEGIAVIPAKGELYAPVDGKIEVVYNRNHAIAMSTANGME 535 IG++I LS+V+D++FSSK MGEGIA+IP+KGELYAPVDG+I +++ NHA+ M TANG+E Sbjct: 478 IGQMISLSDVEDDIFSSKVMGEGIAIIPSKGELYAPVDGEISLLFETNHALGMKTANGVE 537 Query: 536 LLFHVGIDTVRLRGKYFEPQVKAGDEVKAGDLLLKFDLEKIIEEGYDPVTIAIVTNKDKY 595 +LFH+GIDTV+L GK+F+P V+AGD+VKAGDLL++FDLEKI E GYDPVT+A++TN D+Y Sbjct: 538 VLFHIGIDTVQLEGKFFKPLVQAGDKVKAGDLLIQFDLEKIKEAGYDPVTLAVITNTDQY 597 Query: 596 AVEVAELKQVNRQDTLMVVTAL 617 ++V +LK+VNRQDTLMVVT L Sbjct: 598 DIKVTQLKEVNRQDTLMVVTQL 619 >B4AK24.1 B4AK24_BACPU Pts system beta-glucoside-specific eiibca component (Eiibca-bgl) (Eii-bgl) EC=2.7.1.- EC=2.7.1.69 Length = 619 Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/620 (61%), Positives = 484/620 (78%), Gaps = 6/620 (0%) Query: 1 MNYKQTAEEILKHVGGKGNISYFEHCSTRLRFSLIDNTKADVKRLESIPGVIAVKMAGQC 60 M+Y Q A+++L+HVGGK NI++ EHCSTRLRF+LID KADV LE PGVIAV+M+GQC Sbjct: 1 MDYTQVAKDVLQHVGGKENIAHLEHCSTRLRFTLIDQKKADVPALEKTPGVIAVRMSGQC 60 Query: 61 QVVIGNEVVEVYDAVNQLLGXXXXXXXXXXXXXXXXXXXXXXGSVILDFIVGVFQPLIPA 120 QVVIGN+V+EVY V +L+G G+V+LDFIVGVFQPL+PA Sbjct: 61 QVVIGNDVIEVYQKVTKLMGGSSPGQDVPSNQPKEKRKI---GTVLLDFIVGVFQPLVPA 117 Query: 121 IAGAGMVKSXXXXXXXMNVLDPNGQTYKILFQIGDAALYFLPLLVAVTTANKLKVSTXXX 180 IAG G++KS + +D GQTY+IL +GDA LYFLPLLVAVTTANKLKV+ Sbjct: 118 IAGGGILKSFLLLFSLLGWMDAKGQTYQILNMVGDAPLYFLPLLVAVTTANKLKVNPLVA 177 Query: 181 XXXXXXXXXPNMTAMLGEGAQLFGLQIKSISYAYQVFPAILTVLLYAQMEKWFTRISPKV 240 PNMTAML EGAQL +K+I+YAYQVFPAIL+VLLYAQMEK+FTR SPK Sbjct: 178 LSAVGALLLPNMTAMLTEGAQLLSFDVKNIAYAYQVFPAILSVLLYAQMEKFFTRFSPKP 237 Query: 241 IRTFFVPMMSLLITVPVSLLFLGPLGYMLGEGFSAIILTLFDKVGWIXXXXXXXXXXXMV 300 IR FFVPMMSL+ITVPV+LL LGP+G+ G+GFS+IIL +F+ VGW+ MV Sbjct: 238 IRIFFVPMMSLVITVPVTLLLLGPIGFTAGQGFSSIILAMFNTVGWVAVAILAAVLPFMV 297 Query: 301 SIGMHKALVPYALTAMGSTGKELLYLPASLAHNIAESGACFAVAVRTKDKALKATAISAG 360 + GMHKA+VPYA+T MG+ GKE LYLPASLAHNIAESGACFAVA+RTKDK L++TAISAG Sbjct: 298 ASGMHKAMVPYAVTTMGTLGKEALYLPASLAHNIAESGACFAVALRTKDKVLRSTAISAG 357 Query: 361 ISALFGITEPALYGVALQNKKVLASVMFSSLVGGAFIGIVGLQAYVLVGPGIASLSMFIS 420 ISA FGITEPALYGV LQNK+VL SVM S VGG FIG+VG+QA+VLVGPG+AS+SMFIS Sbjct: 358 ISAFFGITEPALYGVTLQNKRVLGSVMIGSFVGGIFIGLVGIQAFVLVGPGLASMSMFIS 417 Query: 421 EDLPRNIINAVIALVISFVVAFVSTFILGKDNKAKE---EEQQLANPLTAVKEFKSPVIG 477 ++LPRN++ AVI VISF+VAF++ F+LGKD +E ++ A + A + FKSPVIG Sbjct: 418 DELPRNLMFAVIGAVISFIVAFIAAFVLGKDKTVEEKTNDQAAFAEQIGAGETFKSPVIG 477 Query: 478 EVIPLSEVKDEVFSSKAMGEGIAVIPAKGELYAPVDGKIEVVYNRNHAIAMSTANGMELL 537 ++I LSEVKD++FSSK MG+GIA++P++G LYAPVDG++ +++ NHA+ M T G+E+L Sbjct: 478 QMISLSEVKDDIFSSKVMGDGIAIVPSEGALYAPVDGEVTMLFETNHALGMKTDQGVEVL 537 Query: 538 FHVGIDTVRLRGKYFEPQVKAGDEVKAGDLLLKFDLEKIIEEGYDPVTIAIVTNKDKYAV 597 FH+GIDTV+L+G+YF P+V+AG+ V+AGDLL++FD+EKII GYDPVT+A++TN D+Y + Sbjct: 538 FHIGIDTVQLQGQYFHPKVQAGERVQAGDLLIEFDVEKIIAAGYDPVTLAVITNTDQYEI 597 Query: 598 EVAELKQVNRQDTLMVVTAL 617 +V L++VNRQDTLMVVT L Sbjct: 598 KVQPLQEVNRQDTLMVVTQL 617 >Q3XWU6.1 Q3XWU6_ENTFC Sugar-specific permease, EIIA 1 domain:PTS system, beta-glucoside-specific IIABC component Length = 614 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/611 (54%), Positives = 432/611 (70%), Gaps = 7/611 (1%) Query: 1 MNYKQTAEEILKHVGGKGNISYFEHCSTRLRFSLIDNTKADVKRLESIPGVIAVKMAGQC 60 MNYKQTAEE+L+++GG+ NIS+ EHCSTRLRF+L DN+K ++ +LE + GV+ V+ QC Sbjct: 1 MNYKQTAEEVLQYIGGEENISHLEHCSTRLRFTLKDNSKVNMSQLEKVDGVMGVRQNVQC 60 Query: 61 QVVIGNEVVEVYDAVNQLLGXXXXXXXXXXXXXXXXXXXXXXGSVILDFIVGVFQPLIPA 120 QV+IGN+VVEVYD V LLG GSV+LDFI+ +FQPLIPA Sbjct: 61 QVIIGNDVVEVYDEVKALLGDNVSSTEEAPKQKQKL------GSVLLDFIISIFQPLIPA 114 Query: 121 IAGAGMVKSXXXXXXXMNVLDPNGQTYKILFQIGDAALYFLPLLVAVTTANKLKVSTXXX 180 IAG G++KS + ++ QTY+IL +G A LYFLP+LVA+TTANKLKV+ Sbjct: 115 IAGGGVLKSLLLLASILGLISDQSQTYQILNLVGGAPLYFLPILVAMTTANKLKVNQLVA 174 Query: 181 XXXXXXXXXPNMTAMLGEGAQLFGLQIKSISYAYQVFPAILTVLLYAQMEKWFTRISPKV 240 P MTAML EGA + +I+YA QVFPAILTVL YAQ+EKWFT++SPK Sbjct: 175 VSAVGALILPEMTAMLAEGATFLSFGLDNIAYASQVFPAILTVLFYAQLEKWFTKVSPKP 234 Query: 241 IRTFFVPMMSLLITVPVSLLFLGPLGYMLGEGFSAIILTLFDKVGWIXXXXXXXXXXXMV 300 IR FFVPMMSLLITVP++LL LGPLGY +G FS+II++L+++ GW+ MV Sbjct: 235 IRIFFVPMMSLLITVPIALLLLGPLGYNVGTAFSSIIVSLYNQFGWVATGVLAAVLPLMV 294 Query: 301 SIGMHKALVPYALTAMGSTGKELLYLPASLAHNIAESGACFAVAVRTKDKALKATAISAG 360 GMHKA++PYA+++M G ELLYLPASLAHNI+E+GACFAV+++TKDK LK+TA+SAG Sbjct: 295 VTGMHKAMIPYAVSSMSELGAELLYLPASLAHNISEAGACFAVSIKTKDKKLKSTAVSAG 354 Query: 361 ISALFGITEPALYGVALQNKKVLASVMFSSLVGGAFIGIVGLQAYVLVGPGIASLSMFIS 420 ISALFGITEPALYGV + +K+VL +VMFSSL+GGAF GIV LQA+ LVGPGIAS++MF Sbjct: 355 ISALFGITEPALYGVTILHKRVLYAVMFSSLIGGAFAGIVALQAFALVGPGIASITMFAD 414 Query: 421 EDLPRNIINAVIALVISFVVAFVSTFILGKDNKAKEE-EQQLANPLTAVKEFKSPVIGEV 479 + P N++ A ISFVVAF + +L KD + E E ++ + + SPV G+V Sbjct: 415 KADPMNLVWAFAVSGISFVVAFAAALVLYKDKEVVNEVETKMETAVVSDAVLSSPVNGKV 474 Query: 480 IPLSEVKDEVFSSKAMGEGIAVIPAKGELYAPVDGKIEVVYNRNHAIAMSTANGMELLFH 539 I LSEVKD VFSS +G+G+A+IP +G L AP DG+I +V+ HAI + TANG ELLFH Sbjct: 475 ISLSEVKDTVFSSGMVGDGVAIIPEEGILVAPEDGEITMVFETKHAIGLKTANGAELLFH 534 Query: 540 VGIDTVRLRGKYFEPQVKAGDEVKAGDLLLKFDLEKIIEEGYDPVTIAIVTNKDKYAVEV 599 +GIDTV+L GK FE V++G++V G L+ FD++ I E G+DP I +VTNKD Y + Sbjct: 535 IGIDTVQLEGKGFEAFVRSGEKVAKGQKLIAFDIDLIKEAGFDPTVICVVTNKDNYTIRS 594 Query: 600 AELKQVNRQDT 610 L+++ D+ Sbjct: 595 FNLEKLVTNDS 605 >B1MZ38.1 B1MZ38_LEUCK Sugar-specific permease, EIIA 1 domain:PTS system, beta-glucoside-specific IIABC component EC=2.7.1.69 Length = 624 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/606 (50%), Positives = 422/606 (69%), Gaps = 9/606 (1%) Query: 1 MNYKQTAEEILKHVGGKGNISYFEHCSTRLRFSLIDNTKADVKRLESIPGVIAV-KMAGQ 59 ++ + A +IL VGG+ N+ HCSTRLRF+L D++ D ++++S+ GV+ + + GQ Sbjct: 3 IDQNKLASDILLAVGGQANVEDLVHCSTRLRFTLRDDSIVDKEKIKSLTGVLGLAQTGGQ 62 Query: 60 CQVVIGNEVVEVYDAVNQLLGXXXXXXXXXXXXXXXXXXXXXXGSVILDFIVGVFQPLIP 119 QVVIGN+V + Y+AV +LL +++LDFI+G+FQPLIP Sbjct: 63 TQVVIGNDVADTYNAVKKLLSESNNDNLTATGTKQNKKLS----AIVLDFIIGIFQPLIP 118 Query: 120 AIAGAGMVKSXXXXXXXMNVLDPNGQTYKILFQIGDAALYFLPLLVAVTTANKLKVSTXX 179 AIAG G++KS + ++ QTYKIL+ +GDA LYFLPLLVA+TTANKLKV+ Sbjct: 119 AIAGGGILKSFLMLANMLGLMSDTTQTYKILYFVGDAPLYFLPLLVAITTANKLKVNPLV 178 Query: 180 XXXXXXXXXXPNMTAMLGE--GAQLFGLQIKSISYAYQVFPAILTVLLYAQMEKWFTRIS 237 PN+ ML G LF IK+I+YAYQVFPAIL +L+YAQ+EK+ T+++ Sbjct: 179 AVSAVAALLTPNLATMLASSGGGHLFSFGIKNITYAYQVFPAILAILVYAQLEKYLTKVT 238 Query: 238 PKVIRTFFVPMMSLLITVPVSLLFLGPLGYMLGEGFSAIILTLFDKVGWIXXXXXXXXXX 297 PKVIR FFVPM+SLLI VP++LL LGP+GY G+GF+A+IL +F K GWI Sbjct: 239 PKVIRGFFVPMVSLLIVVPLTLLVLGPIGYTFGQGFAAVILFIFSKFGWIAVAILAAVLP 298 Query: 298 XMVSIGMHKALVPYALTAMGSTGKELLYLPASLAHNIAESGACFAVAVRTKDKALKATAI 357 MV GMHKA++PY +T++G TGKE++Y ASLAHNI+E+G FAVA+RTKDK LKATA+ Sbjct: 299 FMVVTGMHKAMIPYVVTSLGQTGKEVIYNAASLAHNISEAGGSFAVALRTKDKGLKATAL 358 Query: 358 SAGISALFGITEPALYGVALQNKKVLASVMFSSLVGGAFIGIVGLQAYVLVGPGIASLSM 417 SAGISALFGITEPA+YGV + +K+VL VM S +GGA +G++G++AYV VGPG+ASLSM Sbjct: 359 SAGISALFGITEPAIYGVTILHKRVLYGVMIGSFIGGASLGLMGVEAYVAVGPGLASLSM 418 Query: 418 FISEDLPRNIINAVIALVISFVVAFVSTFILGKD--NKAKEEEQQLANPLTAVKEFKSPV 475 FIS+ LP N++ AVI L+ISF+ +F + IL +D N+ + P SP+ Sbjct: 419 FISKTLPNNLLFAVIGLIISFIASFTAVAILWQDPVNQKDALLSENEAPTNRSVILPSPM 478 Query: 476 IGEVIPLSEVKDEVFSSKAMGEGIAVIPAKGELYAPVDGKIEVVYNRNHAIAMSTANGME 535 G++IPLS V D VFS+K +G+G+A+IP++G+LYAP DG IE+VYN NHAI M T+ G E Sbjct: 479 AGKIIPLSSVNDAVFSNKTLGDGVAIIPSEGKLYAPTDGLIEMVYNTNHAIGMKTSEGDE 538 Query: 536 LLFHVGIDTVRLRGKYFEPQVKAGDEVKAGDLLLKFDLEKIIEEGYDPVTIAIVTNKDKY 595 +LFH+GIDTV L+G++F+ V AG +VK GDLL++F+ E I G+D T+ I+TN Sbjct: 539 ILFHIGIDTVNLKGQFFDVAVTAGQQVKQGDLLVRFNREGIKAAGFDDTTMIIITNPQGA 598 Query: 596 AVEVAE 601 ++++++ Sbjct: 599 SLKLSK 604 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,046,059,069 Number of extensions: 116448556 Number of successful extensions: 364017 Number of sequences better than 1.0e-05: 3012 Number of HSP's gapped: 357484 Number of HSP's successfully gapped: 3275 Length of query: 619 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 477 Effective length of database: 1,722,912,073 Effective search space: 821829058821 Effective search space used: 821829058821 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)