BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0412.0011.p (437 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DGX9.1 B1DGX9_9BACL Extracellular solute-binding protein family 1 472 e-131 C4G515.1 C4G515_ABIDE Putative uncharacterized protein 359 3e-97 B1D9L2.1 B1D9L2_9BACL Extracellular solute-binding protein family 1 156 4e-36 C4L2X4.1 C4L2X4_EXISA Extracellular solute-binding protein family 1 152 6e-35 B3K4S5.1 B3K4S5_9BACI Extracellular solute-binding protein family 1 139 5e-31 >B1DGX9.1 B1DGX9_9BACL Extracellular solute-binding protein family 1 Length = 448 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 230/415 (55%), Positives = 302/415 (72%), Gaps = 9/415 (2%) Query: 22 SSNSGGNEAAS--TGENTGSGXXXXAAKSVTLKMFIAQ-PRFKEQYDNYIADFVKKEKTD 78 + SG N+A S + +N SG A K V LK+F+ RF+EQ+D Y F +KEK + Sbjct: 35 TQGSGANDAPSNTSADNKPSG----APKKVELKIFLGGLDRFREQFDGYFEKFAEKEKAE 90 Query: 79 KNIDVSVQLEMPTADNAKQILKTRLASNDAPDIFAIHAINEIPSYYKAGYLEDLSSQPFV 138 KNI+V+ E P ADNA QILKTRLA+ D PD+F++HA N++P++YKAGYL DLS QP Sbjct: 91 KNIEVTFNSEYPGADNAPQILKTRLATGDVPDVFSLHAGNDMPTFYKAGYLTDLSDQPLA 150 Query: 139 GKLLDSVKPSVTTTDGKVVALPLETLSWGYLYNKTIFREQGLTPPTTLTEMKTVIEKLKA 198 GKL+D +K + + DGKVVA+P+E+LSWGYLYNK IF + G+TPP TLTEMK V++KLK Sbjct: 151 GKLIDGIK-DLVSMDGKVVAVPMESLSWGYLYNKKIFADLGITPPNTLTEMKAVVQKLKD 209 Query: 199 KKITPFVLSYKESWIPQLVLPLAVGGMIKTKDPEFVNKMNKDEGSFTEMKSAIFDVFDLI 258 K+TPF+LSYKESWIPQL LPL VGG++ + P+F++KMN D+GSF ++K +FD+ DL+ Sbjct: 210 NKVTPFLLSYKESWIPQLFLPLTVGGLVNSSHPDFMDKMNNDQGSFADIKE-MFDIIDLV 268 Query: 259 NANGTEKATEVXXXXXXXXXXXXXXXMWLMGPWYAETILKSNPDLDFGVAPLPINDDANA 318 NANGT++A E MW+ G W A++ILK N +FGVAPLPINDD + Sbjct: 269 NANGTDRAFEKGNDDGAADFANGKAAMWVQGTWDADSILKMNDKAEFGVAPLPINDDPAS 328 Query: 319 TLINLSASTSLAVSPTSKNKEVARDFLNYVLDDQASNAFFQSLKFNPVSTVHTYENYPWI 378 IN+S ST+L+V PTSKNKEVA D LN++LDDQASN +QSLKFNPVS HT++ YPW+ Sbjct: 329 LRINVSVSTALSVPPTSKNKEVAIDLLNFILDDQASNDLYQSLKFNPVSKNHTFKPYPWV 388 Query: 379 TEATTYVKAGKSVQDPAIPQSVKDEVGKGLQAYYAGQMSQDDVLKALDKAWKSYN 433 +A YV G+S +DPAIP +VKDE GK LQ+Y+ ++S++DV+K LDK WK N Sbjct: 389 EDAAVYVNKGQSYRDPAIPSAVKDESGKALQSYFDKKLSKEDVIKQLDKTWKEAN 443 >C4G515.1 C4G515_ABIDE Putative uncharacterized protein Length = 380 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 169/378 (44%), Positives = 259/378 (68%), Gaps = 3/378 (0%) Query: 58 PRFKEQYDNYIADFVKKEKTDKNIDVSVQLEMPTADNAKQILKTRLASNDAPDIFAIHAI 117 P++ EQ++NY F KK +++NI+V V LEMP++D + +L+TRL+ NDAPD++ +H Sbjct: 5 PQYMEQWENYTKQFEKKMLSEENINVHVHLEMPSSDQYESVLQTRLSGNDAPDLYTLHC- 63 Query: 118 NEIPSYYKAGYLEDLSSQPFVGKLLDSVKPSVTTTDGKVVALPLETLSWGYLYNKTIFRE 177 N + Y AGYL DLS++P + ++VK +V+ DGK++A+P+E+ +WG LYNK IF+E Sbjct: 64 NNLRVYNDAGYLSDLSNEPLADMIYENVKKTVSI-DGKLMAVPIESQAWGVLYNKAIFKE 122 Query: 178 QGLTPPTTLTEMKTVIEKLKAKKITPFVLSYKESWIPQLVLPLAVGGMIKTKDPEFVNKM 237 L+ P TLT++K + + LK K TPF+L+++E W+PQL+ L +G ++ K P+++ +M Sbjct: 123 CNLSAPETLTDLKNICKTLKEKGYTPFMLAFQEQWVPQLMTSLTLGDIVSGKIPDWLERM 182 Query: 238 NKDEGSFTEMKSAIFDVFDLINANGTEKATEVXXXXXXXXXXXXXXXMWLMGPWYAETIL 297 +++GS+ E++ IFDV DLI +NGTE A E M++ G W A TI+ Sbjct: 183 YQNKGSYKEVRE-IFDVIDLIISNGTEHAMEQGSETGAADFALGKAAMFVQGTWAANTIM 241 Query: 298 KSNPDLDFGVAPLPINDDANATLINLSASTSLAVSPTSKNKEVARDFLNYVLDDQASNAF 357 +NP+++ GV LPIN+D + TLINLS ST+LAV P SK +E+A F NYVLD+ S+A Sbjct: 242 TANPEMELGVFALPINEDPSCTLINLSTSTTLAVYPGSKERELALKFANYVLDENDSSAL 301 Query: 358 FQSLKFNPVSTVHTYENYPWITEATTYVKAGKSVQDPAIPQSVKDEVGKGLQAYYAGQMS 417 FQS FNP++ H YE +PW+T+A+ YV +G + QD +P SV DE G+ LQ YY G ++ Sbjct: 302 FQSCSFNPLAKCHKYEVFPWVTDASAYVASGHAYQDLVLPSSVTDEQGRLLQEYYVGTVT 361 Query: 418 QDDVLKALDKAWKSYNKV 435 D++++ LD A+K+ NK+ Sbjct: 362 VDEIIERLDAAFKTANKL 379 >B1D9L2.1 B1D9L2_9BACL Extracellular solute-binding protein family 1 Length = 437 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 121/426 (28%), Positives = 203/426 (47%), Gaps = 22/426 (5%) Query: 20 GCSSNSGGNEAASTGENTGSGXXXXAA-KSVTLKMFIAQPRFKEQYDNYIADFVKKEKTD 78 G + GGN T N G+ A+ K VT+ MF A P + + ++ YIA++ K + Sbjct: 17 GMLAACGGNNGNDTANNGGTANNGAASDKPVTINMFTASPEYTDAFNAYIAEYKKVKP-- 74 Query: 79 KNIDVSVQLEMPTADNAKQILKTRLASNDAPDIFAIHAINEIPSYYKAGYLEDLSSQPFV 138 +V++ LE+ AD +LK+++AS PD+F A +I ++ A Y DL+++P Sbjct: 75 ---NVTINLEIMQAD-YNTVLKSKIASGSTPDVFQTTAGGDIDTF--AEYSADLTNEPLA 128 Query: 139 GKLLDSVKPSVTTTDGKVVALPLETLSWGYLYNKTIFREQGLT-PPTTLTEMKTVIEKLK 197 + D V+ ++T++DGKV+ LP++ +YNK + + G+ PP T+ E+ I KL+ Sbjct: 129 AAMTDGVRTNMTSSDGKVLGLPVKGNLMTLIYNKKLLTDAGIAEPPKTIAELNDDIAKLE 188 Query: 198 AKKITPFVLSYKESWIPQLVLPLAVGGMIKTKD---PEFVNKMNKDEGSFTE---MKSAI 251 AKKITPF +YKE W+ + + V + E V + + +F + +K Sbjct: 189 AKKITPFANAYKEWWVWKHIFQHYVNAAAEDAGIAPKELVQQFIDGKTTFNDHPVLKDNF 248 Query: 252 FDVFDLINANGTEKATEVXXXXXXXX-XXXXXXXMWLMGPWYAETILKSNPDLDFGVAPL 310 F+ DL +GT+K E M G W E I K +PD+ G+A Sbjct: 249 FNFIDLTVKHGTDKPLERDSNAEVSDFAQGKAAFMTGKGAWDEEAIKKISPDIQIGIAGY 308 Query: 311 PINDDANATLINLSASTSLAVSPTSKNKEVARDFLNYVLDDQASNAFFQSL-KFNPVSTV 369 P++D T I A +L ++ SK A DF N++ +F ++ K P Sbjct: 309 PVSDKPEQTQIVTGADQALRINKDSKVAREAIDFFNWLYTSDYGKQWFSNVAKVIPPIKD 368 Query: 370 HTYENYPWITEATTYVKAGKSVQDPAIPQSV---KDEVGKGLQAYYAGQMSQDDVLKALD 426 + + +K KS D ++ S+ + G+ +QAY G S+D +K + Sbjct: 369 APLPDLDMPKQMEEILKTQKS-GDLSVNYSLDTFHQKFGEIMQAYIGGSKSKDQAIKEIQ 427 Query: 427 KAWKSY 432 AW+ + Sbjct: 428 TAWQQF 433 >C4L2X4.1 C4L2X4_EXISA Extracellular solute-binding protein family 1 Length = 430 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 121/419 (28%), Positives = 190/419 (45%), Gaps = 24/419 (5%) Query: 21 CSSNSGGNEAASTGENTGSGXXXXAAKSVTLKMFIAQPRFKEQYDNYIADFVKKEKTDKN 80 C S +E +S G G K VTL +F +FK + + K+ + + Sbjct: 23 CGGGSLTDEGSSEGNADGGDK-----KDVTLNVF----QFKAEIAKDLEAMAKEYEEETG 73 Query: 81 IDVSVQLEMPTADNAKQILKTRLASNDAPDIFAIHAINEIPSYYKAGYLEDLSSQPFVGK 140 + V+VQ AD LK++ AS + PDIF E ++ LEDLSS+ +VG Sbjct: 74 VKVTVQTVGGGADYGA-ALKSQFASGNEPDIFNNGGFTEAQTWKDK--LEDLSSEKWVGD 130 Query: 141 LLDSVKPSVTTTDGKVVALPLETLSWGYLYNKTIFREQGLTP-PTTLTEMKTVIEKLKAK 199 L + K +T DGK+ +P+ +G++YNK +F + G+ P TL+E+ EKL+ Sbjct: 131 LTEVAKEPMTM-DGKLYGMPMNLEGYGFIYNKELFEKAGIKELPKTLSELTDAAEKLEQA 189 Query: 200 KITPFVLSYKESWIPQLVLPLAVGGMIKTKDPE-FVNKMNKDEGSF--TEMKSAIFDVFD 256 ITPF + Y E WI L + L M + DP+ F+ +N+++ F E +FD Sbjct: 190 GITPFSVGYAEFWI--LGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQEFLKLFD 247 Query: 257 LINANGTEKATEVXXXXXXXXXXXXXXXMWLMGPWYAETILKSNPDLDFGVAPLPINDDA 316 L G + M G W + IL NPD++ G P+PINDDA Sbjct: 248 LTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVPIPINDDA 307 Query: 317 NAT-LINLSASTSLAVSPTSKNKEVARDFLNYV-LDDQASNAFFQSLKFNPV-STVHTYE 373 + + + V+ SK KE A+DFL ++ D + KF P ++ + Sbjct: 308 EKMDRLPVGVPNNWVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAFKSIEAND 367 Query: 374 NYPWITEATTYVKAGKSVQDPAI--PQSVKDEVGKGLQAYYAGQMSQDDVLKALDKAWK 430 P + Y GK++ P +E G +QAY GQ + +++L+ K W+ Sbjct: 368 LGPLADDILAYSNEGKTISWNWFKYPDGAVNEYGALMQAYVGGQKTGEEMLQDFTKVWQ 426 >B3K4S5.1 B3K4S5_9BACI Extracellular solute-binding protein family 1 Length = 429 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 114/398 (28%), Positives = 190/398 (47%), Gaps = 30/398 (7%) Query: 50 TLKMFIAQPRFKEQYDNYIADFVKKEKTDKNIDVSVQLEMPTADNAKQILKTRLASNDAP 109 T+K+F + E + A++ EK I + +Q +D LK + AS D P Sbjct: 42 TIKIFQFKVEIAEALNKLKAEY---EKEHPGIKLDIQTVGGGSDYGA-ALKAKFASGDEP 97 Query: 110 DIFAIHAINEIPSYYKAGYLEDLSSQPFVGKLLDSVKPSVTTTDGKVVALPLETLSWGYL 169 DIF + ++ ++++ +EDLS QP+V ++D K +T DGK+ P+ +G++ Sbjct: 98 DIFNVGGYRDLETWFEN--VEDLSDQPWVKDVVDVAKEPMTK-DGKLYGQPMTIEGYGFI 154 Query: 170 YNKTIFREQGLTP-PTTLTEMKTVIEKLKAKKITPFVLSYKESWI---PQLVLPLAVGGM 225 YNK +F + G+T P TLTE++ +KL+A ITPFV Y+E+WI L +P A Sbjct: 155 YNKDLFEQAGITELPKTLTELEEAAKKLQAAGITPFVNGYQETWILANHLLNIPFA---- 210 Query: 226 IKTKDPE-FVNKMNKDEGSFTEMKSAIFD----VFDLINANGTEKATEVXXXXXXXXXXX 280 +DP+ FV MN EG+ + +A FD +FDL G + Sbjct: 211 -HQEDPDAFVKGMN--EGTEKLVGNAKFDEWMRLFDLTVQYGQKNPLTTDYNTEITTFAS 267 Query: 281 XXXXMWLMGPWYAETILKSNPDLDFGVAPLPINDDANAT-LINLSASTSLAVSPTSKNKE 339 M G W I NPDL+ G+ P+PIND+A + + + V+ SK K+ Sbjct: 268 GEAAMTQNGNWTQVQIDGINPDLNIGLLPMPINDNAEENDKLPVGVPNNWVVNNKSKVKD 327 Query: 340 VARDFLNYVLDDQASNAFF-QSLKFNPVST---VHTYENYPWITEATTYVKAGKSV--QD 393 A++FLN+++ + + + KF P T ++ + Y + K++ + Sbjct: 328 EAKEFLNWLVTSETGKRYITEEFKFIPALTSIEANSETLGDLGNDVMKYSQENKALSWEF 387 Query: 394 PAIPQSVKDEVGKGLQAYYAGQMSQDDVLKALDKAWKS 431 P +E G +Q Y AG + + + + + K+W S Sbjct: 388 NKFPDGGMNEFGSQMQGYVAGNVDKTQLFEGIQKSWDS 425 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.130 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,424,034,663 Number of extensions: 93612060 Number of successful extensions: 203371 Number of sequences better than 1.0e-05: 463 Number of HSP's gapped: 203251 Number of HSP's successfully gapped: 467 Length of query: 437 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 298 Effective length of database: 1,751,175,118 Effective search space: 521850185164 Effective search space used: 521850185164 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 133 (55.8 bits)