BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0407.0014.p (319 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K948.1 B3K948_9BACI Aldo/keto reductase 432 e-119 C0Z4B0.1 C0Z4B0_BREBN Putative uncharacterized protein 426 e-117 B1DBY0.1 B1DBY0_9BACL Aldo/keto reductase 411 e-113 Q67NQ1.1 Q67NQ1_SYMTH Oxidoreductase 276 2e-72 Q847I5.1 Q847I5_PSEPU Putative oxidoreductase 251 6e-65 >B3K948.1 B3K948_9BACI Aldo/keto reductase Length = 324 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 217/318 (68%), Positives = 247/318 (77%) Query: 1 LGSSGLQVSALGLGTNAFGKRADQQTSIDIVHAALGQGINFIDTANIYAGSESERIIGLA 60 LGSSGL+VS LGLGTNAFGKRADQ+TS I+ AL +GINFIDTANIYAGSESERIIG A Sbjct: 6 LGSSGLKVSELGLGTNAFGKRADQETSTRILDHALDRGINFIDTANIYAGSESERIIGEA 65 Query: 61 LEGRRQEAVLATKAXXXXXXXXXXXXXXXXXXXQELEGSLRRLKTDYVDLYQIHTFDPYT 120 L G+R VLATKA QELE SL+RLKTDYVDLYQIHTFDP T Sbjct: 66 LAGKRHNVVLATKAGLVNGQGPNERGSSRYHLQQELENSLKRLKTDYVDLYQIHTFDPDT 125 Query: 121 PLEETLRTLDDMVSAGKVRYIGASNYAAWELMKALGISELRNLVKYVSIQCSYSLADRTP 180 PLEETLRTL+DMV++GKVRYIGASNYAAWE+MKALGISELR +YVS Q SYSLADRTP Sbjct: 126 PLEETLRTLNDMVTSGKVRYIGASNYAAWEIMKALGISELRGYARYVSTQTSYSLADRTP 185 Query: 181 ETQLLPLCLDQGIGIIPYFPLAGGILTGKYGGSDAPPAGSRAQTDPNFSRFLSKDRIALG 240 E +L+PLCLDQG+GIIPYFPLAGGILTGKYG + PAGSRA+TDPNF+RFL + + LG Sbjct: 186 ELELVPLCLDQGVGIIPYFPLAGGILTGKYGQGTSKPAGSRAETDPNFNRFLEEHNLRLG 245 Query: 241 DAVGGIAAELAASPTALSLAWLMHQPAVSTVIVGATKPAQLQESIQSAALALDTGILHRL 300 V +AAE SP+ALS+AWLM +PAVSTVIVGATK QL ++++S + LD + L Sbjct: 246 QQVSQLAAEHGHSPSALSIAWLMDRPAVSTVIVGATKTEQLDDNLKSLDIKLDESLRTSL 305 Query: 301 DEASRAFRHGEPFAYYRL 318 DE S F H +PFA YRL Sbjct: 306 DEISDGFVHAKPFATYRL 323 >C0Z4B0.1 C0Z4B0_BREBN Putative uncharacterized protein Length = 324 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 208/319 (65%), Positives = 243/319 (76%) Query: 1 LGSSGLQVSALGLGTNAFGKRADQQTSIDIVHAALGQGINFIDTANIYAGSESERIIGLA 60 LG SGL+VSALGLGTN+FG RAD+QTS++I+H A+ G+ FIDTANIY +ESERIIGLA Sbjct: 6 LGGSGLKVSALGLGTNSFGGRADEQTSVNIIHTAIENGMTFIDTANIYTQTESERIIGLA 65 Query: 61 LEGRRQEAVLATKAXXXXXXXXXXXXXXXXXXXQELEGSLRRLKTDYVDLYQIHTFDPYT 120 LEG+R E VLATKA ELE SL+RL+TDYVDLYQIHTFDP T Sbjct: 66 LEGKRHEVVLATKAGLVKGEGPNQRGSSRYHLMLELENSLKRLRTDYVDLYQIHTFDPET 125 Query: 121 PLEETLRTLDDMVSAGKVRYIGASNYAAWELMKALGISELRNLVKYVSIQCSYSLADRTP 180 PLEETLR LDDMV +GKVRYIGASNYAAWELMKA+GIS+ L +Y+S Q SYSLADRTP Sbjct: 126 PLEETLRALDDMVRSGKVRYIGASNYAAWELMKAIGISQREGLNRYISTQVSYSLADRTP 185 Query: 181 ETQLLPLCLDQGIGIIPYFPLAGGILTGKYGGSDAPPAGSRAQTDPNFSRFLSKDRIALG 240 E +L+PLCLDQG+GIIPYFPLAGGILTGKY ++ PAGSRA +P F R LS+D++ G Sbjct: 186 ERELVPLCLDQGVGIIPYFPLAGGILTGKYTSAEQAPAGSRADKEPRFVRLLSEDKLEFG 245 Query: 241 DAVGGIAAELAASPTALSLAWLMHQPAVSTVIVGATKPAQLQESIQSAALALDTGILHRL 300 + IAAEL S + LSLAWLMH+PAVS+VIVG T QL +++QS ALALD L L Sbjct: 246 RKISRIAAELGVSSSVLSLAWLMHKPAVSSVIVGVTSVGQLTDNLQSTALALDEATLAEL 305 Query: 301 DEASRAFRHGEPFAYYRLP 319 D S +R+GEPFA YRLP Sbjct: 306 DRLSDTYRNGEPFAVYRLP 324 >B1DBY0.1 B1DBY0_9BACL Aldo/keto reductase Length = 324 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 205/319 (64%), Positives = 238/319 (74%) Query: 1 LGSSGLQVSALGLGTNAFGKRADQQTSIDIVHAALGQGINFIDTANIYAGSESERIIGLA 60 LG SGL+VSALGLGTN+FG RAD+ S I+HAA+ +GINFIDTANIY+ + SE IIG A Sbjct: 6 LGGSGLKVSALGLGTNSFGSRADEAASARILHAAVDRGINFIDTANIYSATASEAIIGAA 65 Query: 61 LEGRRQEAVLATKAXXXXXXXXXXXXXXXXXXXQELEGSLRRLKTDYVDLYQIHTFDPYT 120 L GRR E VLATKA ELE SL+RLKTDYVDLYQIHTFDP T Sbjct: 66 LAGRRHEVVLATKAGLVRGEGPNAKGSSRYHLMLELEDSLKRLKTDYVDLYQIHTFDPET 125 Query: 121 PLEETLRTLDDMVSAGKVRYIGASNYAAWELMKALGISELRNLVKYVSIQCSYSLADRTP 180 PLEETLR L+DM+ +GKVRYIGASNYAAWELMKALG+S+ L ++VS Q SYSLADRTP Sbjct: 126 PLEETLRALEDMIRSGKVRYIGASNYAAWELMKALGLSDRLGLNRFVSTQTSYSLADRTP 185 Query: 181 ETQLLPLCLDQGIGIIPYFPLAGGILTGKYGGSDAPPAGSRAQTDPNFSRFLSKDRIALG 240 E +L+PLCLDQG+GIIPYFPLAGGILTGKY + PAGSRA T+P F+RF ++ +ALG Sbjct: 186 ERELVPLCLDQGVGIIPYFPLAGGILTGKYRAGEEAPAGSRAATNPGFTRFFGENNLALG 245 Query: 241 DAVGGIAAELAASPTALSLAWLMHQPAVSTVIVGATKPAQLQESIQSAALALDTGILHRL 300 V ++ +L S + LSLAWLM QPAVSTVIVGAT QL+ ++ S L LD L L Sbjct: 246 SQVSELSGKLGCSASVLSLAWLMKQPAVSTVIVGATSTEQLEHNLDSVELPLDAAALDEL 305 Query: 301 DEASRAFRHGEPFAYYRLP 319 D SR+FRHGEPFA YRLP Sbjct: 306 DTLSRSFRHGEPFALYRLP 324 >Q67NQ1.1 Q67NQ1_SYMTH Oxidoreductase Length = 316 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 143/309 (46%), Positives = 198/309 (64%), Gaps = 2/309 (0%) Query: 1 LGSSGLQVSALGLGTNAFGKRADQQTSIDIVHAALGQGINFIDTANIYAGSESERIIGLA 60 LG SGL+VS + LGTNAFG R D+ T+I IVHAAL GIN IDTA++Y ESER+IGLA Sbjct: 6 LGRSGLKVSKMALGTNAFGTRTDEATAIRIVHAALDAGINLIDTADMYGQGESERMIGLA 65 Query: 61 LEGRRQEAVLATKAXXXXXXXXXXXXXXXXXXXQELEGSLRRLKTDYVDLYQIHTFDPYT 120 L+ RR AVLATK ++ SLRRL+TDY+DLYQIH +D T Sbjct: 66 LKDRRSRAVLATKCWYPTGDGPNDRGASRKHIMDAVDASLRRLQTDYIDLYQIHRWDGDT 125 Query: 121 PLEETLRTLDDMVSAGKVRYIGASNYAAWELMKALGISELRNLVKYVSIQCSYSLADRTP 180 P+EET+R L+D+V AGKVRYIG SN+AAW+++ A +++ +++S Q YS R Sbjct: 126 PIEETMRALEDLVRAGKVRYIGCSNFAAWQIVMANAVADRHGWSRFISNQPEYSPVSRQI 185 Query: 181 ETQLLPLCLDQGIGIIPYFPLAGGILTGKYGGSDAPPAGSR-AQTDPNFS-RFLSKDRIA 238 E +++P CL G+G I YFPLAGG+ TGKY +APP SR A+ P F+ R+L+ Sbjct: 186 EQEVIPACLADGVGQIVYFPLAGGLFTGKYRRGEAPPPDSRAAKQGPRFAERWLTPAHFD 245 Query: 239 LGDAVGGIAAELAASPTALSLAWLMHQPAVSTVIVGATKPAQLQESIQSAALALDTGILH 298 L +A+ +A E + T L+LAW+M +P V+ IVGA++P Q+ E++ + + L ++ Sbjct: 246 LVEAMEHVAREAGLTLTQLTLAWVMARPGVTAAIVGASRPEQVAENVSACEVQLPQEVMD 305 Query: 299 RLDEASRAF 307 R+ S F Sbjct: 306 RVTALSEPF 314 >Q847I5.1 Q847I5_PSEPU Putative oxidoreductase Length = 343 Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 9/313 (2%) Query: 1 LGSSGLQVSALGLGTNAFGKRA--------DQQTSIDIVHAALGQGINFIDTANIYAGSE 52 LG SGL VS L GT +FG++ DQ + +V AL GINF D+A++Y+ + Sbjct: 6 LGKSGLLVSELCFGTMSFGQQGYWEKIGGLDQSAAQRLVDIALDAGINFFDSADVYSYGQ 65 Query: 53 SERIIGLALEGRRQEAVLATKAXXXXXXXXXXXXXXXXXXXQELEGSLRRLKTDYVDLYQ 112 SE I+G L+G+R + VLATK Q E SLRRL TDY+DLY Sbjct: 66 SEEILGKTLKGKRDKVVLATKVRGRMSQEINDVGLSRRHIIQSCENSLRRLGTDYLDLYI 125 Query: 113 IHTFDPYTPLEETLRTLDDMVSAGKVRYIGASNYAAWELMKALGISELRNLVKYVSIQCS 172 +H+FD TPLEETL TL+D+V +GKVRY+G SNY AW+LMKAL ISE + K++S+Q Sbjct: 126 VHSFDFMTPLEETLSTLNDLVHSGKVRYLGCSNYFAWQLMKALSISERHHWEKFISLQAY 185 Query: 173 YSLADRTPETQLLPLCLDQGIGIIPYFPLAGGILTGKY-GGSDAPPAGSRAQTDPNFSRF 231 YSL R E +L PLC DQG+GI P+ PL G LTGKY G P R++ + NF + Sbjct: 186 YSLLSRDVEIELAPLCRDQGLGITPWSPLGAGFLTGKYPRGGKGPRGARRSKEEHNFIQI 245 Query: 232 LSKDRIALGDAVGGIAAELAASPTALSLAWLMHQPAVSTVIVGATKPAQLQESIQSAALA 291 + A+ D V IA S +SL +L+ + VS+VI+GATKP QLQ+++++ Sbjct: 246 EEEKAYAILDEVQRIAKLRGVSSAQVSLNYLLRKSPVSSVIIGATKPEQLQDNLKTVDWQ 305 Query: 292 LDTGILHRLDEAS 304 L + LDE S Sbjct: 306 LSAEEVAALDEIS 318 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,765,487,551 Number of extensions: 70559329 Number of successful extensions: 202610 Number of sequences better than 1.0e-05: 6513 Number of HSP's gapped: 189649 Number of HSP's successfully gapped: 6546 Length of query: 319 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 184 Effective length of database: 1,788,859,178 Effective search space: 329150088752 Effective search space used: 329150088752 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)