BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0407.0004.p (357 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9M0.1 B1D9M0_9BACL Extracellular solute-binding protein family 1 564 e-159 C1PCG7.1 C1PCG7_BACCO Extracellular solute-binding protein family 1 550 e-155 C5D527.1 C5D527_9BACI Extracellular solute-binding protein family 1 536 e-150 C3J2U8.1 C3J2U8_9BACI Extracellular solute-binding protein family 1 525 e-147 B7YB96.1 B7YB96_9BACI Extracellular solute-binding protein family 1 525 e-147 >B1D9M0.1 B1D9M0_9BACL Extracellular solute-binding protein family 1 Length = 356 Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust. Identities = 264/357 (73%), Positives = 312/357 (87%), Gaps = 1/357 (0%) Query: 1 MKQLVNAFLAILIVAFGLMFLASRLNSAEGYSGGNTLTIYNWGDYIEPELLKQFEKETGI 60 MK LV F+A+L+V+FGLM+L S LNS+ GY+G +TLTIYNWGDYI+PELL +F+KETGI Sbjct: 1 MKSLVQTFIAVLVVSFGLMYLTSYLNSSAGYTGKDTLTIYNWGDYIDPELLDEFQKETGI 60 Query: 61 TVIYQTFDSNEAMLTKVEQGGTTFDVVVPSDYAIAKMREENLLLPLDKSKIPNLANIDSR 120 VIYQTFDSNEAM+TK+EQGGTTFDV +PS+YAI KM+EENLL+PLDKSK+PNL ID Sbjct: 61 KVIYQTFDSNEAMMTKIEQGGTTFDVSIPSEYAIDKMKEENLLIPLDKSKLPNLKYIDPS 120 Query: 121 FMDLSFDPGNVYSVPYFWGTVGIIFNPDMTKGMDFSSWDSLWDNRLKNNIFLVDGAREVM 180 F++LSFDP N YS+PYFWGTVGI++NPD+T + F SW+ LWD LKN I L+DGAREV+ Sbjct: 121 FLNLSFDPDNKYSIPYFWGTVGIVYNPDLTD-LKFHSWNDLWDPSLKNQILLLDGAREVI 179 Query: 181 GMALNSLHYSVNDQNEEHLQEALAKLNRLSPNVKAIVGDEIKMLLANEEAAVGIVWSGDA 240 GM LNSLHYS+ND NEEHLQ A AKL+ L+PNVKAIVGDEIK+LLANEEAAVG+VWSGDA Sbjct: 180 GMGLNSLHYSLNDTNEEHLQAAKAKLSTLTPNVKAIVGDEIKLLLANEEAAVGLVWSGDA 239 Query: 241 SEIMDENDKLDYVVPKEGSNKWFDNMVVPRTAVNVEGAHKFIDFMLRPDVAAKNAEYVGY 300 SEIM EN+KLDYVVP+EGSN WFDNMV+P+TA N+EGAHKFI+FML P+ AA+NAEYVGY Sbjct: 240 SEIMSENEKLDYVVPEEGSNLWFDNMVIPKTAKNIEGAHKFINFMLDPEHAAQNAEYVGY 299 Query: 301 STPNVPALKLLPEEISGDTRFYPPAEITDRLEVYDNLGKRMLAHYNELFLRFKMNKK 357 STPN AL+ LPEEISGD RFYP E+T++LEVY NLGK+ML HYNELFL FKM++K Sbjct: 300 STPNAKALEYLPEEISGDKRFYPDKELTEKLEVYKNLGKKMLVHYNELFLEFKMHRK 356 >C1PCG7.1 C1PCG7_BACCO Extracellular solute-binding protein family 1 Length = 357 Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust. Identities = 260/357 (72%), Positives = 300/357 (84%) Query: 1 MKQLVNAFLAILIVAFGLMFLASRLNSAEGYSGGNTLTIYNWGDYIEPELLKQFEKETGI 60 MKQL+ F+AI++VA L FLA R+N EGY+GGNTLTIYNWGDYI+P L+K+FEK+TGI Sbjct: 1 MKQLLRVFIAIIVVALALQFLAGRMNQTEGYAGGNTLTIYNWGDYIDPALIKKFEKQTGI 60 Query: 61 TVIYQTFDSNEAMLTKVEQGGTTFDVVVPSDYAIAKMREENLLLPLDKSKIPNLANIDSR 120 VIYQTFDSNEAM+TK+ QGGTTFDV VPS+Y I KM++ENLL+PLD SK+PNL IDSR Sbjct: 61 KVIYQTFDSNEAMMTKISQGGTTFDVAVPSEYMIEKMKKENLLIPLDHSKLPNLKYIDSR 120 Query: 121 FMDLSFDPGNVYSVPYFWGTVGIIFNPDMTKGMDFSSWDSLWDNRLKNNIFLVDGAREVM 180 FMDL FDP N YSVPYFWGTVGI++N M G +SWD LWD LKN I LVDGAREVM Sbjct: 121 FMDLPFDPKNRYSVPYFWGTVGIVYNSSMLGGKKITSWDDLWDPDLKNQILLVDGAREVM 180 Query: 181 GMALNSLHYSVNDQNEEHLQEALAKLNRLSPNVKAIVGDEIKMLLANEEAAVGIVWSGDA 240 GM LNSLHYS+ND NE+HLQ+A AKL+RL PNVKAIVGDEIKMLLANEEA++G+VWSGDA Sbjct: 181 GMGLNSLHYSLNDTNEKHLQQAKAKLDRLMPNVKAIVGDEIKMLLANEEASLGVVWSGDA 240 Query: 241 SEIMDENDKLDYVVPKEGSNKWFDNMVVPRTAVNVEGAHKFIDFMLRPDVAAKNAEYVGY 300 +EIM EN KL+YVVP EGSN WFDNMV+P+TA NV+GA KFI+FML P AA+NAEYVGY Sbjct: 241 AEIMSENKKLNYVVPSEGSNLWFDNMVIPKTAKNVDGALKFINFMLDPKNAAQNAEYVGY 300 Query: 301 STPNVPALKLLPEEISGDTRFYPPAEITDRLEVYDNLGKRMLAHYNELFLRFKMNKK 357 STPN ALK+LP+ ISGD RFYP A +T +LEVY NLGK+ LA YNELFL FKM+ K Sbjct: 301 STPNKAALKILPKSISGDRRFYPDAALTKKLEVYKNLGKKKLARYNELFLEFKMHTK 357 >C5D527.1 C5D527_9BACI Extracellular solute-binding protein family 1 Length = 357 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 248/357 (69%), Positives = 305/357 (85%) Query: 1 MKQLVNAFLAILIVAFGLMFLASRLNSAEGYSGGNTLTIYNWGDYIEPELLKQFEKETGI 60 M++L++ F A+ +F L++++S+LN AEGYSG NTLT+YNWGDYI+PEL+K+FEK+TGI Sbjct: 1 MRKLISLFAAVFFASFVLLYVSSQLNKAEGYSGENTLTVYNWGDYIDPELIKKFEKQTGI 60 Query: 61 TVIYQTFDSNEAMLTKVEQGGTTFDVVVPSDYAIAKMREENLLLPLDKSKIPNLANIDSR 120 VIYQTFDSNEAM+ K+ QGGTTFDV VPS+YAI+KM+E+ LL+PLD SK+PNL I+ R Sbjct: 61 KVIYQTFDSNEAMMAKIAQGGTTFDVAVPSEYAISKMKEDGLLIPLDHSKLPNLKYINPR 120 Query: 121 FMDLSFDPGNVYSVPYFWGTVGIIFNPDMTKGMDFSSWDSLWDNRLKNNIFLVDGAREVM 180 F++LSFDPGN YSVPYFWGTVGI++NP+M G +SW+ LWD L+N I LVDGAREV+ Sbjct: 121 FLNLSFDPGNKYSVPYFWGTVGIVYNPEMLGGKKITSWNDLWDKDLRNQILLVDGAREVI 180 Query: 181 GMALNSLHYSVNDQNEEHLQEALAKLNRLSPNVKAIVGDEIKMLLANEEAAVGIVWSGDA 240 GM LNSLHYS+ND N++HLQEA KL+RL+PNVKAIVGDEIKMLL NEEAA+G+VWSGDA Sbjct: 181 GMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAIVGDEIKMLLVNEEAAIGVVWSGDA 240 Query: 241 SEIMDENDKLDYVVPKEGSNKWFDNMVVPRTAVNVEGAHKFIDFMLRPDVAAKNAEYVGY 300 + I+ ENDKLDYVVPKEGSN WFDNMV+P+TA N+EGAH+FI+FML P AA+NAEYVGY Sbjct: 241 AGIIAENDKLDYVVPKEGSNLWFDNMVIPKTAKNIEGAHQFINFMLDPKNAAQNAEYVGY 300 Query: 301 STPNVPALKLLPEEISGDTRFYPPAEITDRLEVYDNLGKRMLAHYNELFLRFKMNKK 357 STPN AL LP+E++ D RFYP E LEVY+NLGKRMLA+YNELFL+FKM++K Sbjct: 301 STPNEKALDYLPKEVTEDKRFYPDFESVGNLEVYENLGKRMLAYYNELFLQFKMHRK 357 >C3J2U8.1 C3J2U8_9BACI Extracellular solute-binding protein family 1 Length = 357 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 250/357 (70%), Positives = 292/357 (81%) Query: 1 MKQLVNAFLAILIVAFGLMFLASRLNSAEGYSGGNTLTIYNWGDYIEPELLKQFEKETGI 60 MK+LV F A+ I AF LMF+ RLN AEGY GG T+T+YNWGDYI+P L+++FEKETG Sbjct: 1 MKRLVQGFAAVFIAAFVLMFITHRLNEAEGYGGGKTVTVYNWGDYIDPALIREFEKETGW 60 Query: 61 TVIYQTFDSNEAMLTKVEQGGTTFDVVVPSDYAIAKMREENLLLPLDKSKIPNLANIDSR 120 VIYQTFDSNEAM+ K+ QGG TFDV VPSDYAI+KM EENLLLPLD K+PNL I+ R Sbjct: 61 KVIYQTFDSNEAMMAKIAQGGATFDVAVPSDYAISKMIEENLLLPLDHDKLPNLQYIEPR 120 Query: 121 FMDLSFDPGNVYSVPYFWGTVGIIFNPDMTKGMDFSSWDSLWDNRLKNNIFLVDGAREVM 180 F++L FDP N YSVPYFWGTVGI++N DM G +SW+ LW+ L+N I LVDGAREVM Sbjct: 121 FLNLPFDPHNRYSVPYFWGTVGIVYNRDMLGGKTITSWNDLWNPDLRNQILLVDGAREVM 180 Query: 181 GMALNSLHYSVNDQNEEHLQEALAKLNRLSPNVKAIVGDEIKMLLANEEAAVGIVWSGDA 240 GMALNSL YS+ND N+ HLQEA KL+RL PNVKAIVGDEIK+LLANEEAA+G+VWSGDA Sbjct: 181 GMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIVGDEIKLLLANEEAAIGVVWSGDA 240 Query: 241 SEIMDENDKLDYVVPKEGSNKWFDNMVVPRTAVNVEGAHKFIDFMLRPDVAAKNAEYVGY 300 +EI+ ENDKLDYVVPKEGSN WFDNMV+P+TA N+EGAH FI+FML P AA+NAEYVGY Sbjct: 241 AEIIAENDKLDYVVPKEGSNLWFDNMVIPKTAKNIEGAHAFINFMLDPKHAAQNAEYVGY 300 Query: 301 STPNVPALKLLPEEISGDTRFYPPAEITDRLEVYDNLGKRMLAHYNELFLRFKMNKK 357 STPN AL LP++I+GD RFYP + LEVY+NLGK MLA+YNELFL FKM +K Sbjct: 301 STPNKKALAYLPKDIAGDRRFYPDLDSAGHLEVYENLGKHMLAYYNELFLEFKMQQK 357 >B7YB96.1 B7YB96_9BACI Extracellular solute-binding protein family 1 Length = 357 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 250/357 (70%), Positives = 292/357 (81%) Query: 1 MKQLVNAFLAILIVAFGLMFLASRLNSAEGYSGGNTLTIYNWGDYIEPELLKQFEKETGI 60 MK+LV F A+ I AF LMF+ RLN AEGY GG T+T+YNWGDYI+P L+++FEKETG Sbjct: 1 MKRLVQGFAAVFIAAFVLMFITHRLNEAEGYGGGKTVTVYNWGDYIDPALIREFEKETGW 60 Query: 61 TVIYQTFDSNEAMLTKVEQGGTTFDVVVPSDYAIAKMREENLLLPLDKSKIPNLANIDSR 120 VIYQTFDSNEAM+ K+ QGG TFDV VPSDYAI+KM EENLLLPLD K+PNL I+ R Sbjct: 61 KVIYQTFDSNEAMMAKIAQGGATFDVAVPSDYAISKMIEENLLLPLDHDKLPNLQYIEPR 120 Query: 121 FMDLSFDPGNVYSVPYFWGTVGIIFNPDMTKGMDFSSWDSLWDNRLKNNIFLVDGAREVM 180 F++L FDP N YSVPYFWGTVGI++N DM G +SW+ LW+ L+N I LVDGAREVM Sbjct: 121 FLNLPFDPHNRYSVPYFWGTVGIVYNRDMLGGKTITSWNDLWNPDLRNQILLVDGAREVM 180 Query: 181 GMALNSLHYSVNDQNEEHLQEALAKLNRLSPNVKAIVGDEIKMLLANEEAAVGIVWSGDA 240 GMALNSL YS+ND N+ HLQEA KL+RL PNVKAIVGDEIK+LLANEEAA+G+VWSGDA Sbjct: 181 GMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIVGDEIKLLLANEEAAIGVVWSGDA 240 Query: 241 SEIMDENDKLDYVVPKEGSNKWFDNMVVPRTAVNVEGAHKFIDFMLRPDVAAKNAEYVGY 300 +EI+ ENDKLDYVVPKEGSN WFDNMV+P+TA N+EGAH FI+FML P AA+NAEYVGY Sbjct: 241 AEIIAENDKLDYVVPKEGSNLWFDNMVIPKTAKNIEGAHAFINFMLDPKHAAQNAEYVGY 300 Query: 301 STPNVPALKLLPEEISGDTRFYPPAEITDRLEVYDNLGKRMLAHYNELFLRFKMNKK 357 STPN AL LP++I+GD RFYP + LEVY+NLGK MLA+YNELFL FKM +K Sbjct: 301 STPNKKALAYLPKDIAGDRRFYPDLDSAGHLEVYENLGKHMLAYYNELFLEFKMQQK 357 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,219,117,912 Number of extensions: 96910537 Number of successful extensions: 265488 Number of sequences better than 1.0e-05: 1943 Number of HSP's gapped: 262338 Number of HSP's successfully gapped: 1945 Length of query: 357 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 220 Effective length of database: 1,770,017,148 Effective search space: 389403772560 Effective search space used: 389403772560 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)