BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0405.0001.p (553 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5I1.1 B3K5I1_9BACI Putative uncharacterized protein 842 0.0 C0ZA19.1 C0ZA19_BREBN Putative uncharacterized protein 489 e-136 Q6D053.1 Q6D053_ERWCT Putative uncharacterized protein 358 6e-97 A3IFX1.1 A3IFX1_9BACI Putative uncharacterized protein 251 1e-64 B1HQM5.1 B1HQM5_LYSSC Putative uncharacterized protein 244 2e-62 >B3K5I1.1 B3K5I1_9BACI Putative uncharacterized protein Length = 551 Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/550 (72%), Positives = 458/550 (83%) Query: 3 MDHTLETLLDEMKQEIDRWAAYISNIDADKIVKRTTLQVGIHSGALLEYAKGRVEVTDGE 62 MD TLETLL+EMKQEID+W AYIS+ +ADKIVKRTTLQ+GIH ALLEY KGRV +TD E Sbjct: 1 MDQTLETLLNEMKQEIDKWMAYISDKNADKIVKRTTLQIGIHDYALLEYNKGRVSMTDDE 60 Query: 63 LDLTVPGGKAGPSEWLTGEQVREQIVPELASYMQHKLNGMPPALIDYHFTFNGKFQVREG 122 LDL++PG + P E LT E VRE IVP+L+SYMQ KL+ MP +LIDY FTFNGKF+VREG Sbjct: 61 LDLSMPGDRGTPGEPLTKELVREHIVPKLSSYMQRKLDEMPSSLIDYQFTFNGKFRVREG 120 Query: 123 GVNVRILEYVDGTKKKLLLERISAYVGNKLEAGKYPTKPLETFFLSRHLLDEGLFPELDP 182 +N+ IL Y D TKKK L ERIS Y+ NKLEAG YPTKPLETFFLSRH+LDEGLFP+ DP Sbjct: 121 DLNLCILTYADETKKKQLQERISIYIANKLEAGTYPTKPLETFFLSRHILDEGLFPDADP 180 Query: 183 GRIISVFENIQQVNKGNKHLAEHRSNLSGALRNWVENHWLPRYFDNIGSEWQKEYKRKSD 242 II+VFE IQQ+NKGN+HLAEHRSNL ALRNW E WLPRYFDNIG++WQ+EYK+K D Sbjct: 181 AWIIAVFERIQQLNKGNQHLAEHRSNLITALRNWAEQRWLPRYFDNIGTQWQREYKKKID 240 Query: 243 ARLDNPEQGLIELVLYSAILILKYEPSYSRSVGLSMLNCAIELGSTRAKRLTEEGSGTFA 302 L+N EQG I+L++Y+AILILKYEPSYSRS GL+MLNCA +LGS RA+RL++EGSGTFA Sbjct: 241 IHLENTEQGPIDLLIYAAILILKYEPSYSRSTGLAMLNCAKDLGSERAQRLSKEGSGTFA 300 Query: 303 REDVCLRGELAECTANDVFAEVTIAIKQETEESYARALRFLIRLLSLGFPKSYQIKLKSS 362 +EDVCLR E+ ECTANDVFAEV+IAIK+ET ESYARALRFL RL SLGFPKSYQIKLKS Sbjct: 301 KEDVCLRDEMVECTANDVFAEVSIAIKEETGESYARALRFLTRLFSLGFPKSYQIKLKSP 360 Query: 363 VKQWLPVKGLAKSGTHRFFANALEYPKLQPLLEEYAGVAMETFEWYTDTEGEKSCMPGSY 422 VKQWLP+KGLAKSGTHRFFANALEYP+L P +EEYA AME FEWY DTEGEK+CMPGSY Sbjct: 361 VKQWLPIKGLAKSGTHRFFANALEYPELYPFMEEYAKAAMEPFEWYADTEGEKNCMPGSY 420 Query: 423 AVFGLGLADRAYFPLVEQYMEQVDEEHQSVQNSFTAALAGRHGVNAETLPTLVKCMLHSG 482 AVFGLGL D +FPLVE+YM +VD+EHQSVQN FT A RHGV+ ET+PTLVKCMLH Sbjct: 421 AVFGLGLKDTTFFPLVEEYMGKVDDEHQSVQNHFTIAFTERHGVHTETIPTLVKCMLHCN 480 Query: 483 DSMKLKXXXXXXXXXXXXXXXXQVRGLKRHEVEHIVYLIWGGTDKLKKIAAKAEGERGKW 542 DSMK+K QVRGL ++VE IVYLIWGGTDKLKKIAAKAEGER +W Sbjct: 481 DSMKMKIQSDMEHGLNVRLLLDQVRGLPYYQVERIVYLIWGGTDKLKKIAAKAEGERAQW 540 Query: 543 LSELAQAASR 552 L++LA+AA R Sbjct: 541 LTDLAEAARR 550 >C0ZA19.1 C0ZA19_BREBN Putative uncharacterized protein Length = 557 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 259/547 (47%), Positives = 350/547 (63%), Gaps = 8/547 (1%) Query: 11 LDEMKQEIDRWAAYISN-IDADKIVKRTTLQVGIHSGALLEYAKGRVEVTDGELDLTVPG 69 L+EMK I +W N D + +V RTTLQVGI + L+Y GR + + + G Sbjct: 9 LEEMKTAIHKWFDEQENRKDTEDVVLRTTLQVGIFNFVTLDYRPGRTRIETSKSVGSAAG 68 Query: 70 GKAGPSEWLTGEQVREQIVPELASYMQHKLNGMPPA-LIDYHFTFNGKFQVREGGVNVRI 128 K+ + T EQ+ ++ P L ++ +L+ + + LI+Y FTF G F +G V + + Sbjct: 69 KKSMKASPFTQEQILHEVQPLLVEIVRERLDKLETSPLINYRFTFQGTFATTDGLVELTV 128 Query: 129 LEYVDGTKKKLLLERISAYVGNKLEAGKYPTKPLETFFLSRHLLDEGLFPELDPGRIISV 188 LE V KK+ LLERI +Y+ KLE G PT LETFFL+RHLLD LFPEL + I++ Sbjct: 129 LETVYEEKKRQLLERIQSYMEEKLEKGSNPTNRLETFFLARHLLDPHLFPELQAAKTIAL 188 Query: 189 FENIQQVNKGN-KHLAEHRSNLSGALRNWVENHWLPRYFDNIGSEWQ-KEYKRKSDARL- 245 F+ IQ++NK + LAEHR ++ AL +WVEN +LPRY+D SE++ EY K DA Sbjct: 189 FDRIQELNKEQVEALAEHRRDIIRALTDWVENVFLPRYYDVTRSEYRTNEYVIKPDAVFE 248 Query: 246 --DNPEQGLIELVLYSAILILKYEPSYSRSVGLSMLNCAIELGSTRAKRLTEEGSGTFAR 303 D P Q I+L+LY A++I++YEP +++ G + L A +LGS +A R+ ++GS +F++ Sbjct: 249 DKDEPNQP-IDLLLYGAVMIIRYEPDFNKLKGQTFLEMAKQLGSGKAARMLKDGSDSFSK 307 Query: 304 EDVCLRGELAECTANDVFAEVTIAIKQETEESYARALRFLIRLLSLGFPKSYQIKLKSSV 363 EDV LR EL EC ANDVF+ TI I++E +Y RA+ F++ LL FPKSY+IKLKSSV Sbjct: 308 EDVHLRHELVECKANDVFSLFTIVIRKEEAGAYERAISFILSLLRKDFPKSYKIKLKSSV 367 Query: 364 KQWLPVKGLAKSGTHRFFANALEYPKLQPLLEEYAGVAMETFEWYTDTEGEKSCMPGSYA 423 K++LP+KGLAKS THRFFANAL YP+L PLLEEYA AM+ FEWY DTE EKS MPGSYA Sbjct: 368 KEYLPIKGLAKSDTHRFFANALAYPELHPLLEEYAREAMKEFEWYEDTESEKSVMPGSYA 427 Query: 424 VFGLGLADRAYFPLVEQYMEQVDEEHQSVQNSFTAALAGRHGVNAETLPTLVKCMLHSGD 483 VFGLGL+ YFPLVE YM VD+EHQ V + FTA A +G+ + PTL+ C+L S D Sbjct: 428 VFGLGLSSERYFPLVEAYMNLVDDEHQLVHDKFTAVFAETYGITERSTPTLIACLLRSHD 487 Query: 484 SMKLKXXXXXXXXXXXXXXXXQVRGLKRHEVEHIVYLIWGGTDKLKKIAAKAEGERGKWL 543 S+KLK Q+ L E E ++Y IWG +KL +A KAEG R + + Sbjct: 488 SLKLKIQPELESEDKLSLFVQQIETLSDDEAERVLYPIWGKVEKLAVLARKAEGSRKELI 547 Query: 544 SELAQAA 550 L ++ Sbjct: 548 IRLQKSV 554 >Q6D053.1 Q6D053_ERWCT Putative uncharacterized protein Length = 374 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 187/372 (50%), Positives = 247/372 (66%), Gaps = 6/372 (1%) Query: 186 ISVFENIQQVNKGNKHLAEHRSNLSGALRNWVENHWLPRYFDNIGSEWQKE---YKRKSD 242 ++ FE IQQ N G+ L EHR + GAL+ WV+ +L RY D E+ E Y K Sbjct: 1 MTQFEKIQQRNAGHAELLEHRRRIVGALKGWVDQQFLLRYCDVSQPEYFSEPEIYTLKPG 60 Query: 243 ARLD--NPEQ-GLIELVLYSAILILKYEPSYSRSVGLSMLNCAIELGSTRAKRLTEEGSG 299 LD +P+ +ELVLY+A++IL+YEPSYS+S L L+ A +LG RA + EEGSG Sbjct: 61 IALDLQDPQTLHPVELVLYAAVMILRYEPSYSKSQALEYLDIAKQLGYPRAVSMMEEGSG 120 Query: 300 TFAREDVCLRGELAECTANDVFAEVTIAIKQETEESYARALRFLIRLLSLGFPKSYQIKL 359 TF + + L+ E EC ANDVF+ +TI +++E+ E+Y +AL F+ RLL+LGFPKSY+I L Sbjct: 121 TFEQALINLKNEWVECVANDVFSTITIRVRKESTEAYEQALLFITRLLTLGFPKSYKIVL 180 Query: 360 KSSVKQWLPVKGLAKSGTHRFFANALEYPKLQPLLEEYAGVAMETFEWYTDTEGEKSCMP 419 KSSV+Q+LP+KGLAKS THRFFANAL+Y + PLLE+YA A+E FEWY D+EGEK MP Sbjct: 181 KSSVRQYLPIKGLAKSDTHRFFANALQYASIHPLLEDYARAAIEKFEWYADSEGEKCSMP 240 Query: 420 GSYAVFGLGLADRAYFPLVEQYMEQVDEEHQSVQNSFTAALAGRHGVNAETLPTLVKCML 479 GSYAVFGLGL D YFPLV+ YME VD+EHQSV F A +HGV A+ + LV C+ Sbjct: 241 GSYAVFGLGLTDAGYFPLVKDYMESVDDEHQSVHIGFIHAFFDKHGVTAQNVVALVACLS 300 Query: 480 HSGDSMKLKXXXXXXXXXXXXXXXXQVRGLKRHEVEHIVYLIWGGTDKLKKIAAKAEGER 539 H+ +S+KL +VR + +EHI+YLIWG KL +A K+E +R Sbjct: 301 HATESLKLNMLPALEDDALFEQLIEEVRRREPAVIEHILYLIWGNAKKLAALAKKSEAKR 360 Query: 540 GKWLSELAQAAS 551 G L+ L QA++ Sbjct: 361 GALLTSLIQASA 372 >A3IFX1.1 A3IFX1_9BACI Putative uncharacterized protein Length = 555 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 174/533 (32%), Positives = 271/533 (50%), Gaps = 26/533 (4%) Query: 31 DKIVKRTTLQVGIHSGALLEYAKGRVEVTDGELDLTVPGGKAGPSEWLTG-----EQVRE 85 D I ++ LQ GI + + + KG+ + +D+ P + + + E + + Sbjct: 31 DGIQHQSRLQAGIFNYLKITWKKGKSQYGTICIDVYEPFSWSDSAYKVDAGTYIQEIIEQ 90 Query: 86 QIVPELASYMQHKLNGM------PPALIDYHFTFNGKFQVREGGVNVRILEYVDGTKKKL 139 V +L S + K+ M P DYHF +F+ E + E ++ K Sbjct: 91 NYVEDLFSALCTKMEQMFQAQSYGPRFFDYHFQVLLEFEYGETMWAFQK-ELLNVQKLAF 149 Query: 140 LLERISAYVGNKLEAGKYPTKPLET--FFLSRHLLDEGLFPELDPGRIISVFENIQQVNK 197 + + +++++ K+ A + P P + FFL++HL++ F + I + +Q+ + Sbjct: 150 MKQELASFMETKVMA-ELPVLPSDNDEFFLAQHLVNPHFFQQ-TAEEIEPIIRQLQEKHL 207 Query: 198 GNKH-LAEHRSNLSGALRNWVENHWLPRYFDNIGSEWQKEYKRKSDARLDNPEQGLIELV 256 NK L + + A ++W E+H+L YF+ ++ E+ K++ + EQ ++ Sbjct: 208 ANKERLNQWSYYFTNAFKHWAEDHFLKSYFEQT-DDYTNEWLLKNEDIEPSMEQEKLDFF 266 Query: 257 LYSAILILKYEPSYSRSVGLSMLNCAIELGSTRAKRLTEEGSGTFAREDVCLRGELAECT 316 LY A+ I EP+ L L A ELGS +A GSG F E C + E Sbjct: 267 LYVAVKIGYKEPA----TRLQYLTLAKELGSQQATEYLRNGSGRF--ESKC-KSAFIEGR 319 Query: 317 ANDVFAEVTIAIKQETEESYARALRFLIRLLSLGFPKSYQIKLKSSVKQWLPVKGLAKSG 376 AND+ + I IK+E E +Y AL ++I LL GFPK Y++ LK+ VK +LP+K LAKS Sbjct: 320 ANDILQTIDIQIKKEEEAAYREALHYIIHLLQEGFPKGYKMTLKTKVKNFLPLKKLAKSK 379 Query: 377 THRFFANALEYPKLQPLLEEYAGVAMETFEWYTDTE-GEKSCMPGSYAVFGLGLADRAYF 435 H+FFAN L YP L PLL +YA VAM+ + WY D E EKS MPG+YAV GLGL + YF Sbjct: 380 LHQFFANCLAYPSLFPLLADYAQVAMKEYAWYQDVEPSEKSAMPGTYAVLGLGLYSKDYF 439 Query: 436 PLVEQYMEQVDEEHQSVQNSFTAALAGRHGVNAETLPTLVKCMLHSGDSMKLKXXXXXXX 495 PLV+ YM VD EHQSVQ+S+ A HG++ E +P V +L + +S K Sbjct: 440 PLVQSYMTLVDSEHQSVQDSYGEAFIEAHGLSVELIPVFVGILLGANESAKPLKGIENME 499 Query: 496 XXXXXXXXXQVRGLKRHEVEHIVYLIWGGTDKLKKIAAKAEGERGKWLSELAQ 548 ++ + +E E ++Y I+GG KL + + ER + L +L Q Sbjct: 500 VELLKALVQELETKESYEREFVLYRIFGGAKKLAQRIKQETSERKEVLEKLQQ 552 >B1HQM5.1 B1HQM5_LYSSC Putative uncharacterized protein Length = 555 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 165/529 (31%), Positives = 266/529 (50%), Gaps = 26/529 (4%) Query: 33 IVKRTTLQVGIHSGALLEYAKGRVEVTDGELDLTVPGGKAGPS---------EWLTGEQV 83 I ++ LQ GI + + + KG + +D+ P + + + + Sbjct: 33 IQHQSRLQAGIFNYLKVTWKKGNSQYGTICIDIYEPFSWSDSAYKVNAGTYIQEIIEHNY 92 Query: 84 REQIVPELASYMQHKLNGMP--PALIDYHFTFNGKFQVREGGVNVRILEYVDGTKKKLLL 141 E + L + M+ P P DYHF + + E + E ++ K L+ Sbjct: 93 AEDLFSALCTKMEQMFQAQPYGPRFFDYHFQVMLESEFGETKWRFQK-ELLNHQKLALMK 151 Query: 142 ERISAYVGNKLEAGKYPTKPLET--FFLSRHLLDEGLFPELDPGRIISVFENIQQVNKGN 199 + +++++ K+ A P +P + FFL++HL++ F + I + +Q+ + N Sbjct: 152 QELASFLEKKVMAA-LPVRPSDNDEFFLAQHLVNPHFFQQ-TAEEIEPIIRQLQEKHLAN 209 Query: 200 K-HLAEHRSNLSGALRNWVENHWLPRYFDNIGSEWQKEYKRKSDARLDNPEQGLIELVLY 258 K L + + A + W E+H+L YF S++ E+ K++ E+ ++ LY Sbjct: 210 KERLEKWNYYFTNAFKQWAEDHFLKGYFQQT-SDYSNEWILKNEEIEPYMEKKKLDFFLY 268 Query: 259 SAILILKYEPSYSRSVGLSMLNCAIELGSTRAKRLTEEGSGTFAREDVCLRGELAECTAN 318 A+ I EP+ L L+ A +LGS +A ++GSG F + + + E AN Sbjct: 269 VAVKIGYKEPA----TRLEYLHLAKQLGSQQATEYLQKGSGRFESKR---KSDFFEGAAN 321 Query: 319 DVFAEVTIAIKQETEESYARALRFLIRLLSLGFPKSYQIKLKSSVKQWLPVKGLAKSGTH 378 D+ + I IK+E E +Y AL ++I LL GFPK Y++ LK+ VK +LP+K LAKS H Sbjct: 322 DILQTIDIRIKKEEEAAYREALHYIIHLLQEGFPKGYKMMLKTKVKNFLPLKKLAKSKLH 381 Query: 379 RFFANALEYPKLQPLLEEYAGVAMETFEWYTDTE-GEKSCMPGSYAVFGLGLADRAYFPL 437 +FFAN L YP L PLL +YA VAME + WY D E EKS MPG+YA+ GLGL + YF L Sbjct: 382 QFFANCLSYPSLFPLLADYAQVAMEEYAWYQDVEPSEKSAMPGTYAILGLGLYSKDYFQL 441 Query: 438 VEQYMEQVDEEHQSVQNSFTAALAGRHGVNAETLPTLVKCMLHSGDSMKLKXXXXXXXXX 497 V+ YM VD EHQSVQ+S+ A HG++ E +P LV +L + +S K Sbjct: 442 VQSYMTLVDSEHQSVQDSYGEAFIEAHGLSVEFIPVLVAILLGANESAKPLKGIEMMKVD 501 Query: 498 XXXXXXXQVRGLKRHEVEHIVYLIWGGTDKLKKIAAKAEGERGKWLSEL 546 ++ + +E E ++Y ++GG KL + + +R + L +L Sbjct: 502 LLKALVQELENKESYEREFVLYQLFGGAKKLAQHIKQETSDRKEELEKL 550 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,291,236,423 Number of extensions: 139067324 Number of successful extensions: 326009 Number of sequences better than 1.0e-05: 27 Number of HSP's gapped: 325950 Number of HSP's successfully gapped: 27 Length of query: 553 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 412 Effective length of database: 1,732,333,088 Effective search space: 713721232256 Effective search space used: 713721232256 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)