BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0402.0002.p (646 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6L4.1 B3K6L4_9BACI 1,4-alpha-glucan branching enzyme 970 0.0 B1DH58.1 B1DH58_9BACL 1,4-alpha-glucan branching enzyme 756 0.0 C1PFC1.1 C1PFC1_BACCO 1,4-alpha-glucan branching enzyme 736 0.0 B8CVY1.1 GLGB_HALOH 1,4-alpha-glucan-branching enzyme EC=2.4.1.18 714 0.0 A6TSD1.1 A6TSD1_ALKMQ 1,4-alpha-glucan branching enzyme 712 0.0 >B3K6L4.1 B3K6L4_9BACI 1,4-alpha-glucan branching enzyme Length = 668 Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/636 (71%), Positives = 531/636 (83%), Gaps = 10/636 (1%) Query: 12 SSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTEDV 71 + + +YLFHEGT + SY +GAH+A EEG GVRFTVWAP+A VGLAG+ NGWDG++D Sbjct: 11 TPEQVYLFHEGTWFHSYQCMGAHLATEEGEEGVRFTVWAPNARQVGLAGDWNGWDGSQD- 69 Query: 72 DSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVADL 131 LY++PDSG WSRFFPGM+ GTFYKY+I GP G FLKADPYAF AEVRPATAS+V DL Sbjct: 70 -PLYRMPDSGIWSRFFPGMETGTFYKYQITGPFGETFLKADPYAFHAEVRPATASVVTDL 128 Query: 132 DGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLIPY 191 GY W DAA R ++++PY P+NIYEMHFGTWRQKEDG +TYRE+++ LIPY Sbjct: 129 SGYRWNDAAWRR-------KNKSPYAKPVNIYEMHFGTWRQKEDGSFFTYRELADQLIPY 181 Query: 192 LVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVLLD 251 L EMSYTHVEFMPLAEHPYDLSWGYQGTG++A TSRYG P D MFL+D+LHQAGIGVLLD Sbjct: 182 LQEMSYTHVEFMPLAEHPYDLSWGYQGTGFYALTSRYGTPHDFMFLVDQLHQAGIGVLLD 241 Query: 252 WVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFWFE 311 WVPAHFAKDAHGLR FDG PLYEYADP AEKPGWGTLSFD++KPE+ SFLISNALFW + Sbjct: 242 WVPAHFAKDAHGLRQFDGAPLYEYADPQKAEKPGWGTLSFDYAKPEVISFLISNALFWMD 301 Query: 312 MFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKALM 371 M+HIDG+RVDAVTSM+RLDFEK+ ++ N +GGLENLEAI F+Q LNK +F YYP ALM Sbjct: 302 MYHIDGLRVDAVTSMIRLDFEKREGQYSLNEHGGLENLEAISFLQELNKAVFRYYPNALM 361 Query: 372 MAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICYAY 431 MAEESSAW GVTAPVHEGGLGFNYKWNMGWMNDTL YIE +F RP HHNLLTFPICYAY Sbjct: 362 MAEESSAWAGVTAPVHEGGLGFNYKWNMGWMNDTLSYIEQEFDQRPTHHNLLTFPICYAY 421 Query: 432 SENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFGQF 491 SEN+TLPLSHDEVVHGKKSLL+KMPG+YEQKFAGLR+LLGY I+ PGK LLFMGGEFGQF Sbjct: 422 SENFTLPLSHDEVVHGKKSLLNKMPGSYEQKFAGLRILLGYQITQPGKNLLFMGGEFGQF 481 Query: 492 IEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSGQS 551 IEWKDQEQLDWLLLDYESHR+ LA+TAALN++YV+E+ALWE DH EG++W+ ADD QS Sbjct: 482 IEWKDQEQLDWLLLDYESHRKQLAYTAALNRMYVDEKALWEQDHRWEGFEWLSADDHEQS 541 Query: 552 IVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSGVHN-AP 610 +VSY+R G +P DTL+I+INFQP YRVG+PR G Y E+ +S++ ++GGSG+ N Sbjct: 542 VVSYMRMGTKPGDTLIIVINFQPKAYDQYRVGLPRAGQYVEILNSDHADYGGSGLLNDGE 601 Query: 611 MKSSKKEWHNQVNSIELTIPPLSFLVLKKAGRKAVK 646 MK+ KK WH Q +S+E+ +PPL +VLKK ++ K Sbjct: 602 MKAEKKTWHGQTHSLEIKLPPLGMVVLKKKPPRSRK 637 >B1DH58.1 B1DH58_9BACL 1,4-alpha-glucan branching enzyme Length = 675 Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/645 (57%), Positives = 463/645 (71%), Gaps = 18/645 (2%) Query: 12 SSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTEDV 71 S+DDIY FHEGT SY +GAH+A E+G GVRFTVWAP+A + +A + N W+G ++ Sbjct: 8 SADDIYQFHEGTWLNSYRKMGAHLAVEKGRGGVRFTVWAPNARRLAVASDRNSWNGFKEA 67 Query: 72 D-SLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVAD 130 L KI +SG WS F G G YKY I G LKADPYAF+AEVRP TAS + Sbjct: 68 GYELEKIGESGIWSGFIEGFGDGDLYKYDIETKAGDRQLKADPYAFKAEVRPRTASAICS 127 Query: 131 LDGYVWGDAALRXXXXXXXXRSRAP-YNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLI 189 LDGY W D + R R P + PLNIYE+H GTWRQ +DG LYTY E++E L Sbjct: 128 LDGYEWQDKSW--------LRGRKPLFGQPLNIYEVHAGTWRQHQDGRLYTYEELAEELP 179 Query: 190 PYLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVL 249 Y EM YTH+E MPLAEHPYD SWGYQGTGYFAATSRYG+P LM +D+ H G+GV+ Sbjct: 180 AYAAEMGYTHIELMPLAEHPYDRSWGYQGTGYFAATSRYGDPHQLMAFVDRCHSLGLGVI 239 Query: 250 LDWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFW 309 LDWVP HFAKDAHGLR+FDG+PLYE ADP++AEK WGTL+FD+ KPE+ FLISNALFW Sbjct: 240 LDWVPGHFAKDAHGLRLFDGSPLYENADPLIAEKEQWGTLAFDYEKPEVCGFLISNALFW 299 Query: 310 FEMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKA 369 +++HIDG RVDA+TSML +F++ +R N +GG E+LEA F+++LN + ++P A Sbjct: 300 LDVYHIDGFRVDAITSMLLRNFDRPDGRWRPNRHGGKEDLEATAFLRKLNTVVRAHFPHA 359 Query: 370 LMMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICY 429 LMMAEES A+PGVT +GGLGF +KWNMGWMNDTL Y H R HH LLTFPI Y Sbjct: 360 LMMAEESHAFPGVTVSPEQGGLGFTHKWNMGWMNDTLKYFAHQPEERGSHHGLLTFPIWY 419 Query: 430 AYSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFG 489 A+ E YTLPLSHDEVVHGKKSLLDKMPG+YE+KF+GLRLLLGY ++HPGKKLLFMGGEFG Sbjct: 420 AFDERYTLPLSHDEVVHGKKSLLDKMPGSYEEKFSGLRLLLGYMMTHPGKKLLFMGGEFG 479 Query: 490 QFIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSG 549 QFIEW+D+ +LDWLLLDYE HR++ F LN+LY+ +R+LW+LD +G++WID D G Sbjct: 480 QFIEWRDEAELDWLLLDYEQHRKLQEFVRTLNRLYIEQRSLWQLDSSPKGFEWIDFQDEG 539 Query: 550 QSIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSGV--- 606 QS++ Y R+G+ ++L+I+ NF YRVGVP G Y+ L +S++ +GGSG Sbjct: 540 QSVIVYRRKGRANGESLIILCNFHSHAHARYRVGVPSQGGYKILLNSDSPVYGGSGFMEF 599 Query: 607 ---HNAPMKSSKKEWHNQVNSIELTIPPLSFLVLK--KAGRKAVK 646 A ++S WH + +SIEL +PPLS ++LK K R AV+ Sbjct: 600 AASEGAVVRSEPVVWHGRKHSIELPLPPLSVVILKREKESRAAVR 644 >C1PFC1.1 C1PFC1_BACCO 1,4-alpha-glucan branching enzyme Length = 646 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/635 (54%), Positives = 458/635 (72%), Gaps = 8/635 (1%) Query: 10 LPSSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTE 69 LP+ ++YLFHEGT Y SYT+ GAH+ EG GVRF VWAP+A V +AG+ NGWDG++ Sbjct: 12 LPTDFELYLFHEGTLYESYTLFGAHVMEYEGKKGVRFAVWAPNAQAVAVAGDFNGWDGSK 71 Query: 70 DVDSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVA 129 + ++ DS W F P + G YKY I GP G+ F KADPYAF +EVRP TAS++ Sbjct: 72 H--QMKRLKDSSIWVLFIPDLAPGELYKYEITGPSGNTFFKADPYAFYSEVRPKTASVIY 129 Query: 130 DLDGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLI 189 D Y W D PY+ P+ IYEMHFG+W++K +G YTYREM++ L+ Sbjct: 130 DPGTYQWQDRKWMSHKA-----KSDPYHEPMLIYEMHFGSWKKKANGDFYTYREMADELV 184 Query: 190 PYLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVL 249 PY+ YTH+E MP+ EHP+D SWGYQ TG++A TSRYG+P+D M+ IDK H+ G+GV+ Sbjct: 185 PYVAGHGYTHIELMPMMEHPFDRSWGYQITGFYAPTSRYGKPEDFMYFIDKCHENGLGVI 244 Query: 250 LDWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFW 309 LDWVP HF KDAHGL FDGTPL+E ADP +AE+P WGT +FDF KPEI SFLISNA+FW Sbjct: 245 LDWVPVHFCKDAHGLGRFDGTPLFEPADPDMAERPIWGTYNFDFQKPEIFSFLISNAIFW 304 Query: 310 FEMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKA 369 +++HIDG RVDAV+S++ L+ ++ + N GG NLEA+ FI++LN+ +F +P A Sbjct: 305 MDVYHIDGFRVDAVSSLIYLNHDRGDEKKLTNQYGGDVNLEAVEFIKKLNEAVFKMFPHA 364 Query: 370 LMMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICY 429 LM+AEE+++WP VTAPV+ GGLGFNYKWNMGW++D L Y++ RP H+LLTF + Y Sbjct: 365 LMIAEEATSWPLVTAPVYAGGLGFNYKWNMGWVHDVLTYMQTPEEKRPDAHDLLTFSMYY 424 Query: 430 AYSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFG 489 A+SENY LP SHDE+V+GKKSLL+KMPG + +KFA LRLL Y ++HPGKKLLFMG EFG Sbjct: 425 AFSENYVLPFSHDELVYGKKSLLNKMPGDFPRKFANLRLLYAYFMTHPGKKLLFMGSEFG 484 Query: 490 QFIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSG 549 QF EWKD QLDW+LLD+E+HR FT ALN Y N R+LW LDH+ EG++WID ++ Sbjct: 485 QFDEWKDLTQLDWMLLDFETHRTFFQFTKALNAFYQNTRSLWRLDHDPEGFEWIDPNNRR 544 Query: 550 QSIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSGVHNA 609 QSI+ ++RRGKR D +++ NF ++ +R+GVP G Y E+F++++ FGGSG+ N Sbjct: 545 QSIIIFMRRGKRKGDYCIVLCNFSKIKYDKFRIGVPSFGKYIEIFNTDDERFGGSGLLNK 604 Query: 610 -PMKSSKKEWHNQVNSIELTIPPLSFLVLKKAGRK 643 ++ K+ +HNQ S+E++IPPLS L+ KK +K Sbjct: 605 EAIQVDKEPFHNQPYSMEISIPPLSALIFKKQSKK 639 >B8CVY1.1 GLGB_HALOH 1,4-alpha-glucan-branching enzyme EC=2.4.1.18 Length = 630 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/630 (55%), Positives = 447/630 (70%), Gaps = 9/630 (1%) Query: 10 LPSSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTE 69 +P+ D YLFH+G++Y+SY LGAH E G GVRF+VWAP+A V + G+ N WDG Sbjct: 5 IPTDYDRYLFHQGSHYKSYEFLGAHPCEENGKTGVRFSVWAPNAAEVRVIGSFNNWDG-- 62 Query: 70 DVDSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVA 129 +++ + +I DSG W+ F P K G YKY I+ G +K+DPYAF AE +P TASIV Sbjct: 63 NINPMERINDSGIWTTFIPEAKKGDLYKYEILTKYGDTRIKSDPYAFYAERKPKTASIVY 122 Query: 130 DLDGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLI 189 L+ Y W D + YN P+ IYE+H G+W++KE+G TYRE++ L+ Sbjct: 123 SLNNYKWNDKKWMDKK-----KDYTVYNKPVLIYEVHLGSWKRKENGDYLTYRELANELV 177 Query: 190 PYLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVL 249 Y+ +M Y ++E +P+AEHP+D SWGYQ T Y++ TSRYG P+D M+ IDK HQ GIGV+ Sbjct: 178 EYVKDMGYNYIELLPVAEHPFDGSWGYQLTNYYSVTSRYGTPEDFMYFIDKCHQNGIGVI 237 Query: 250 LDWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFW 309 LDWVP HF KD HGLR+FDGT LYE DP AE W TL+FDF++PE+ SFLISNA+FW Sbjct: 238 LDWVPGHFCKDDHGLRLFDGTALYEPQDPRKAENE-WDTLNFDFNQPEVWSFLISNAVFW 296 Query: 310 FEMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKA 369 F+++HIDG+RVDAV+++L L+ K E+ N GG ENLEAI FI+ LNK IF Y+P Sbjct: 297 FDIYHIDGLRVDAVSNLLYLNHGKGDGEWVPNKYGGHENLEAIDFIKTLNKVIFEYFPNP 356 Query: 370 LMMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICY 429 LM+AEESSAWP VT P H GGLGFNYKWNMGWMNDTL Y+E D R YHHNLLTF Y Sbjct: 357 LMIAEESSAWPLVTYPAHLGGLGFNYKWNMGWMNDTLEYMEMDSIYRKYHHNLLTFSFMY 416 Query: 430 AYSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFG 489 +SEN+ LPLSHDEVVHGKKSLLDKMPG Y QKFA LR L GY + HPGKKLLFMGGEFG Sbjct: 417 MFSENFVLPLSHDEVVHGKKSLLDKMPGDYWQKFANLRTLYGYMMGHPGKKLLFMGGEFG 476 Query: 490 QFIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSG 549 QFIEW ++ LDWLLLDY+ H+++ + LN Y E+ LWE DHE G++WID DS Sbjct: 477 QFIEWNYKQGLDWLLLDYDMHKKLQNYVRELNYFYRQEKTLWEGDHEDGGFEWIDPHDSE 536 Query: 550 QSIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSGVHNA 609 QSI++++R+ K D +I+ NF P RH YR+GVP Y+E+F+S+ +FGGSG N+ Sbjct: 537 QSIITFMRKNKDGSDYTIIVCNFTPEVRHNYRIGVPEFKEYKEVFNSDLEKFGGSGQKNS 596 Query: 610 P-MKSSKKEWHNQVNSIELTIPPLSFLVLK 638 ++ S++ WHN+ SIE+TIPPL+ + K Sbjct: 597 TIIQPSEQPWHNRPYSIEITIPPLATIFFK 626 >A6TSD1.1 A6TSD1_ALKMQ 1,4-alpha-glucan branching enzyme Length = 631 Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/631 (54%), Positives = 437/631 (69%), Gaps = 10/631 (1%) Query: 10 LPSSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTE 69 + S D+YLFHEGTNY Y LGAH+ E G G RFT W P+A V +AG+ N W G + Sbjct: 5 MISQQDVYLFHEGTNYYGYKSLGAHVTVEGGQKGTRFTAWVPNAKEVRVAGDFNHWQGQQ 64 Query: 70 DVDSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVA 129 + KIPDS WS F G++ GT YKY I+G +G+ +LK DPY F +E RP TASIV Sbjct: 65 H--PMEKIPDSKLWSVFIGGIQEGTLYKYEILGDNGAFYLKIDPYGFLSEPRPNTASIVC 122 Query: 130 DLDGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLI 189 +L+ Y W D + R P+ IYE+H G+WR+K D YRE++ L Sbjct: 123 ELEDYPWQDQKWQQNKVVENSLHR-----PVMIYEVHLGSWRRKADDSFCNYREIAHELG 177 Query: 190 PYLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVL 249 Y VEM YTHVE MP+ EHP D SWGYQ TGY+A TSRYG PKD M+ +D LHQ GIGV+ Sbjct: 178 DYAVEMGYTHVEVMPIMEHPLDDSWGYQITGYYAVTSRYGNPKDFMYFVDYLHQKGIGVI 237 Query: 250 LDWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFW 309 LDWVP HF DAHGLR FDG +YEY D A WGT++FD KPE+ SFLISNA FW Sbjct: 238 LDWVPGHFCADAHGLRQFDGGNVYEYQDANRAINKEWGTVNFDLGKPEVKSFLISNACFW 297 Query: 310 FEMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKA 369 EM+HIDG+RVDAV +ML LD+ ++ ++ N GG ENLEA+ F+++LNK +F Y+P Sbjct: 298 MEMYHIDGLRVDAVANMLYLDYGREHGDWTANQYGGNENLEAVDFLKQLNKAVFQYFPNH 357 Query: 370 LMMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICY 429 M+AEES+ WP VTAP+H GGLGFNYKWNMGWMNDTL Y+E D R + HNLLTF + Y Sbjct: 358 FMIAEESTQWPMVTAPIHVGGLGFNYKWNMGWMNDTLKYMELDPIHRKWSHNLLTFSLMY 417 Query: 430 AYSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFG 489 Y+EN+ LPLSHDEVVH KKSLL+KM G Y +KFA LR GY ++HPGKKLLFMGGEFG Sbjct: 418 TYTENFILPLSHDEVVHEKKSLLEKMSGNYWEKFANLRCYYGYLMAHPGKKLLFMGGEFG 477 Query: 490 QFIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSG 549 QFIEW + LDW+LLD+E HR++ + L Y E +LW+ D+++EG+QWID +D Sbjct: 478 QFIEWNHNKALDWMLLDHEMHRKLHQYMKDLIHFYKEEASLWQNDYQVEGFQWIDPNDYQ 537 Query: 550 QSIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSGVHNA 609 QS+++++RR R D +II NF + R YRVGVP G Y+E+F+S++TE+GGSGV N Sbjct: 538 QSMITFMRR--RADDFTIIICNFTTIPREQYRVGVPFKGNYKEVFNSDSTEYGGSGVKNP 595 Query: 610 P-MKSSKKEWHNQVNSIELTIPPLSFLVLKK 639 MK+ K +WHNQ SIE +IPPL L +++ Sbjct: 596 RVMKAEKVKWHNQSYSIETSIPPLGVLYIRQ 626 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.139 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,265,503,835 Number of extensions: 193259912 Number of successful extensions: 369324 Number of sequences better than 1.0e-05: 2031 Number of HSP's gapped: 363499 Number of HSP's successfully gapped: 2044 Length of query: 646 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 504 Effective length of database: 1,722,912,073 Effective search space: 868347684792 Effective search space used: 868347684792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)