BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0397.0034.p
         (277 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q183E7.1 Q183E7_CLOD6 Cell surface protein                            171   9e-41
Q631T4.1 Q631T4_BACCZ Putative uncharacterized protein                162   4e-38
Q81XG3.1 Q81XG3_BACAN Putative uncharacterized protein                161   5e-38
C3P021.1 C3P021_BACAA Putative uncharacterized protein                161   5e-38
C3LD92.1 C3LD92_BACAC Putative uncharacterized protein                161   5e-38

>Q183E7.1 Q183E7_CLOD6 Cell surface protein
          Length = 653

 Score =  171 bits (432), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 90/115 (78%)

Query: 21  LIIVNKKTNTLGYFSSGKLVRTFPVATGKSKSLTPEGSFKIVVKIKNRPYYKEHIPGGDP 80
           +IIVN + NTLGYF + KLV+ F VATGK  S TP G  K+V KIKNRPYYK +IPGG P
Sbjct: 42  VIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPYYKGNIPGGSP 101

Query: 81  SNPLGDRWLGLEVNGTKGTTYAIHGNNNESSIGKYVSAGCIRMHNDDIHWLYPQI 135
            NPLGDRW+GL + GT G TY IHGNNNESSIGK++S GCIRMHN D+ WL+ Q+
Sbjct: 102 RNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQV 156


>Q631T4.1 Q631T4_BACCZ Putative uncharacterized protein
          Length = 153

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 92/118 (77%)

Query: 20  DLIIVNKKTNTLGYFSSGKLVRTFPVATGKSKSLTPEGSFKIVVKIKNRPYYKEHIPGGD 79
           D +IVN + N + Y+ +GK +++F VATGK+ + TP+G+FKIV KIKNRPYY   I GGD
Sbjct: 29  DQLIVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYYTGKIKGGD 88

Query: 80  PSNPLGDRWLGLEVNGTKGTTYAIHGNNNESSIGKYVSAGCIRMHNDDIHWLYPQIAK 137
           P NPLGDRWLGL + GT GTTYAIHG NN  +IGK+ + GCIRM+N+DIHWL+ +I +
Sbjct: 89  PRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNNDIHWLFERIPQ 146


>Q81XG3.1 Q81XG3_BACAN Putative uncharacterized protein
          Length = 153

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 92/118 (77%)

Query: 20  DLIIVNKKTNTLGYFSSGKLVRTFPVATGKSKSLTPEGSFKIVVKIKNRPYYKEHIPGGD 79
           D +IVN + N + Y+ +GK +++F VATGK+ + TP+G+FKIV KIKNRPYY   I GGD
Sbjct: 29  DQLIVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYYTGKIKGGD 88

Query: 80  PSNPLGDRWLGLEVNGTKGTTYAIHGNNNESSIGKYVSAGCIRMHNDDIHWLYPQIAK 137
           P NPLGDRWLGL + GT GTTYAIHG NN  +IGK+ + GCIRM+N+DIHWL+ +I +
Sbjct: 89  PRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNNDIHWLFERIPQ 146


>C3P021.1 C3P021_BACAA Putative uncharacterized protein
          Length = 153

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 92/118 (77%)

Query: 20  DLIIVNKKTNTLGYFSSGKLVRTFPVATGKSKSLTPEGSFKIVVKIKNRPYYKEHIPGGD 79
           D +IVN + N + Y+ +GK +++F VATGK+ + TP+G+FKIV KIKNRPYY   I GGD
Sbjct: 29  DQLIVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYYTGKIKGGD 88

Query: 80  PSNPLGDRWLGLEVNGTKGTTYAIHGNNNESSIGKYVSAGCIRMHNDDIHWLYPQIAK 137
           P NPLGDRWLGL + GT GTTYAIHG NN  +IGK+ + GCIRM+N+DIHWL+ +I +
Sbjct: 89  PRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNNDIHWLFERIPQ 146


>C3LD92.1 C3LD92_BACAC Putative uncharacterized protein
          Length = 153

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 92/118 (77%)

Query: 20  DLIIVNKKTNTLGYFSSGKLVRTFPVATGKSKSLTPEGSFKIVVKIKNRPYYKEHIPGGD 79
           D +IVN + N + Y+ +GK +++F VATGK+ + TP+G+FKIV KIKNRPYY   I GGD
Sbjct: 29  DQLIVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYYTGKIKGGD 88

Query: 80  PSNPLGDRWLGLEVNGTKGTTYAIHGNNNESSIGKYVSAGCIRMHNDDIHWLYPQIAK 137
           P NPLGDRWLGL + GT GTTYAIHG NN  +IGK+ + GCIRM+N+DIHWL+ +I +
Sbjct: 89  PRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNNDIHWLFERIPQ 146


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,533,372,623
Number of extensions: 61931792
Number of successful extensions: 140487
Number of sequences better than 1.0e-05: 688
Number of HSP's gapped: 140500
Number of HSP's successfully gapped: 688
Length of query: 277
Length of database: 3,060,696,203
Length adjustment: 134
Effective length of query: 143
Effective length of database: 1,798,280,193
Effective search space: 257154067599
Effective search space used: 257154067599
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)