BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0397.0032.p (328 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1ZMI3.1 B1ZMI3_OPITP Putative uncharacterized protein 343 1e-92 B3Q4I1.1 B3Q4I1_RHIE6 Hypothetical conserved protein 323 2e-86 B4CZ95.1 B4CZ95_9BACT Putative uncharacterized protein 321 7e-86 Q2SE91.1 Q2SE91_HAHCH Putative uncharacterized protein 318 4e-85 A9C0S4.1 A9C0S4_DELAS Putative uncharacterized protein 318 5e-85 >B1ZMI3.1 B1ZMI3_OPITP Putative uncharacterized protein Length = 327 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 171/326 (52%), Positives = 222/326 (68%), Gaps = 2/326 (0%) Query: 4 RSSENKIILIKRKTRLEELVVRYNTIQQAQFYIERLGADFSDYISEDFHYRKAVESAVME 63 R +ENKI+L+ R+TRLEEL R+NT+ QAQFY+E+LG DF DY ED YR AVE+A Sbjct: 3 RLTENKIVLVVRETRLEELKARFNTVSQAQFYVEQLGGDFGDYEREDASYRAAVENAHQR 62 Query: 64 LSALGRVQLLERQHVPNFIFGDQDTVVVLGQDGLVANTLKYLHEQPLIGVNPDPQRWDGV 123 LS LGRVQ++ R+ VPNFIFG +D V +GQDGLVANTLKYL QPL+GVNP+P R+DG Sbjct: 63 LSQLGRVQVVHRRFVPNFIFGPEDIAVAVGQDGLVANTLKYLDGQPLVGVNPEPSRYDGQ 122 Query: 124 LLPFTVKDLRHLVPEVFRGQRQVREVTLAKAQLNDGQSLYGVNDLFVGRKTHVSARYQVE 183 LLPF V+DL ++PEVFR QR ++ VT+A+A LN+GQ +Y VNDLF+G KTH SARY + Sbjct: 123 LLPFAVRDLDQVIPEVFRRQRPIKSVTMAQAVLNNGQVIYAVNDLFIGPKTHGSARYTIS 182 Query: 184 LNGVTEQQXXXXXXXXXXXXXXXWLKSVLAGAMGI-ARSAAQLQMDXXXXXXXXXXXXXX 242 G +E+ W S++AGA G+ A A+ M Sbjct: 183 HEGKSERHSSSGVIVSTGLGSTGWFSSLIAGAQGVTATLQARFPMAGSHGTGEAVDVVSW 242 Query: 243 XXXIEQRLPWDHPNLYFTVREPFPSRTTSAGLVFGQISGRAPLKITSQMPEDGVIFSDGV 302 + R PWD +L+FTVREPFPS+TT +VFG++ ++ L+I S MPE GVIFSDG+ Sbjct: 243 QGR-KLRFPWDADHLFFTVREPFPSKTTGTEIVFGKVQAQSVLRIESHMPEQGVIFSDGI 301 Query: 303 ESDFLEFNSGVEATITLGEKRGRLVV 328 E+DFLEFNSGV+A I + + G+LV+ Sbjct: 302 EADFLEFNSGVKAEIGVAARMGQLVL 327 >B3Q4I1.1 B3Q4I1_RHIE6 Hypothetical conserved protein Length = 312 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 160/324 (49%), Positives = 211/324 (65%), Gaps = 15/324 (4%) Query: 5 SSENKIILIKRKTRLEELVVRYNTIQQAQFYIERLGADFSDYISEDFHYRKAVESAVMEL 64 S E KIIL+ R TRL+EL+ R+NT+QQAQFY+E LGADFSDY++E Y A+ L Sbjct: 4 SDERKIILVVRPTRLDELIARFNTVQQAQFYVEHLGADFSDYLAEKKRYETAIAEVEASL 63 Query: 65 SALGRVQLLERQHVPNFIFGDQDTVVVLGQDGLVANTLKYLHEQPLIGVNPDPQRWDGVL 124 A+ RVQ L+R+++PNF+FG D VVVLGQDGLVANTLKYL QP++GVNPDP+RWDG+L Sbjct: 64 RAVARVQRLDRRYLPNFVFGPDDVVVVLGQDGLVANTLKYLDGQPVLGVNPDPKRWDGLL 123 Query: 125 LPFTVKDLRHLVPEVFRGQRQVREVTLAKAQLNDGQSLYGVNDLFVGRKTHVSARYQVEL 184 LPF K L+ ++ E R +R ++ V++AKA LN G ++ VNDLF+G ++HVSARY ++ Sbjct: 124 LPFNPKSLQKVIGEALRNKRPIKRVSMAKATLNTGAVIHAVNDLFIGPQSHVSARYLLKA 183 Query: 185 NGVTEQQXXXXXXXXXXXXXXXWLKSVLAGAMGIARSAAQLQMDXXXXXXXXXXXXXXXX 244 E+Q WLKS+ +G +G A + D Sbjct: 184 EEREERQSSSGIIVSTGMGSTGWLKSLYSGWLGAASALGLEPSD---------------R 228 Query: 245 XIEQRLPWDHPNLYFTVREPFPSRTTSAGLVFGQISGRAPLKITSQMPEDGVIFSDGVES 304 I+ WD L + VREPFPSRTT A +V G +S PL I S+MPE GVIFSDG+E+ Sbjct: 229 TIDMSFAWDADYLRYFVREPFPSRTTGASIVAGLVSNTQPLTIVSEMPEHGVIFSDGIEA 288 Query: 305 DFLEFNSGVEATITLGEKRGRLVV 328 DFLEFN+G A +T+ E++G LVV Sbjct: 289 DFLEFNAGTRAVVTVAERQGLLVV 312 >B4CZ95.1 B4CZ95_9BACT Putative uncharacterized protein Length = 318 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 164/324 (50%), Positives = 214/324 (66%), Gaps = 9/324 (2%) Query: 4 RSSENKIILIKRKTRLEELVVRYNTIQQAQFYIERLGADFSDYISEDFHYRKAVESAVME 63 R +ENKI+L+ R TRL +L R+ T QQA+FY+ RLGADFSDY ED Y++A+ Sbjct: 3 RLTENKIVLVVRATRLADLKARFATKQQARFYVRRLGADFSDYEREDGTYQEAIRETQRI 62 Query: 64 LSALGRVQLLERQHVPNFIFGDQDTVVVLGQDGLVANTLKYLHEQPLIGVNPDPQRWDGV 123 LS LGRV ++R +PNF+FG +D VV LGQDGLVAN LKYL QPLIGVNPDP+R+DG Sbjct: 63 LSELGRVYTVQRAMLPNFVFGPKDVVVALGQDGLVANILKYLDGQPLIGVNPDPRRYDGQ 122 Query: 124 LLPFTVKDLRHLVPEVFRGQRQVREVTLAKAQLNDGQSLYGVNDLFVGRKTHVSARYQVE 183 LLPF V+DL L+PEVF +R +R+V++A A+LN G +L+ VNDLF+G ++H SARY + Sbjct: 123 LLPFRVRDLPRLLPEVFARRRALRQVSMAVAKLNTGLALHAVNDLFIGPRSHGSARYTMH 182 Query: 184 LNGVTEQQXXXXXXXXXXXXXXXWLKSVLAGAMGIARSAAQLQMDXXXXXXXXXXXXXXX 243 + E WLKS++AGA G+A + Sbjct: 183 IGKKKEAHSSSGVVVSTGLGSTGWLKSLIAGATGVADLVKE---------EFGRPIAGRG 233 Query: 244 XXIEQRLPWDHPNLYFTVREPFPSRTTSAGLVFGQISGRAPLKITSQMPEDGVIFSDGVE 303 I+ P D +L+FTVREPFP+++T A L+FG+++ PL I SQM E+GVIFSDG+E Sbjct: 234 SAIDPTFPCDARHLFFTVREPFPTQSTGATLLFGRLTAEQPLVIESQMSENGVIFSDGIE 293 Query: 304 SDFLEFNSGVEATITLGEKRGRLV 327 +DFL+FNSG ATITL EKRG LV Sbjct: 294 ADFLDFNSGTRATITLAEKRGCLV 317 >Q2SE91.1 Q2SE91_HAHCH Putative uncharacterized protein Length = 313 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 162/327 (49%), Positives = 213/327 (65%), Gaps = 15/327 (4%) Query: 1 MSTRSSENKIILIKRKTRLEELVVRYNTIQQAQFYIERLGADFSDYISEDFHYRKAVESA 60 MS R++E K+IL+KR+TRLEEL R+NT +QA+FYIE G DF YI ED YR ++ +A Sbjct: 1 MSERATETKLILVKRRTRLEELAWRHNTEEQARFYIESRGEDFDAYIHEDQSYRTSLAAA 60 Query: 61 VMELSALGRVQLLERQHVPNFIFGDQDTVVVLGQDGLVANTLKYLHEQPLIGVNPDPQRW 120 LS +GRVQ L+R + NFIFG QD VVVLGQDGLVANTLKYLH QP++ VNPDP R Sbjct: 61 ETALSRIGRVQTLDRDFLSNFIFGAQDVVVVLGQDGLVANTLKYLHGQPVVAVNPDPARI 120 Query: 121 DGVLLPFTVKDLRHLVPEVFRGQRQVREVTLAKAQLNDGQSLYGVNDLFVGRKTHVSARY 180 DGVLLPF V DL ++ E+ R +R ++ V++A+A LNDGQ++ VND F+G K H S RY Sbjct: 121 DGVLLPFQVTDLDVVLKELLRAKRPIKRVSMAEASLNDGQAMVAVNDFFIGPKNHTSLRY 180 Query: 181 QVELNGVTEQQXXXXXXXXXXXXXXXWLKSVLAGAMGIARSAAQLQMDXXXXXXXXXXXX 240 +++ ++E W++SV+AG++G+AR A +Q D Sbjct: 181 EIDFRQMSEMHSSSGVIVSTGLGSTGWMRSVIAGSLGVAR-ARGVQSD------------ 227 Query: 241 XXXXXIEQRLPWDHPNLYFTVREPFPSRTTSAGLVFGQISGRAPLKITSQMPEDGVIFSD 300 I Q L WD L F+VREPFPS TT LV+G+I+G L I SQ PE+GVIFSD Sbjct: 228 --RTEIYQPLSWDAQKLMFSVREPFPSNTTQTELVYGEIAGGEALIIKSQAPENGVIFSD 285 Query: 301 GVESDFLEFNSGVEATITLGEKRGRLV 327 G+ D +EFNSG I+L ++ G +V Sbjct: 286 GMIGDAIEFNSGAVVNISLSQRYGSIV 312 >A9C0S4.1 A9C0S4_DELAS Putative uncharacterized protein Length = 310 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 156/324 (48%), Positives = 211/324 (65%), Gaps = 16/324 (4%) Query: 5 SSENKIILIKRKTRLEELVVRYNTIQQAQFYIERLGADFSDYISEDFHYRKAVESAVMEL 64 ++E K +L+ R+TRL+ELV RY+T+ QA+FYIE LGADF DY+ E Y A+++ V L Sbjct: 3 ANERKTVLVVRRTRLDELVARYHTLSQARFYIEHLGADFGDYLRESAAYATALQAVVQAL 62 Query: 65 SALGRVQLLERQHVPNFIFGDQDTVVVLGQDGLVANTLKYLHEQPLIGVNPDPQRWDGVL 124 A GR Q+++R VPNF+FG D VV LGQDG+VANT+KYL QPLIGVNP+P RWDG+L Sbjct: 63 EARGRYQIVDRALVPNFVFGADDIVVALGQDGMVANTMKYLDGQPLIGVNPEPARWDGLL 122 Query: 125 LPFTVKDLRHLVPEVFRGQRQVREVTLAKAQLNDGQSLYGVNDLFVGRKTHVSARYQVEL 184 LPF DL L+ +V +R R VTLA+A+L+DGQ L NDLF+G ++H SA Y + L Sbjct: 123 LPFAPADLAALLGDVAANRRPTRAVTLAEARLSDGQVLRAANDLFIGPRSHTSALYDIAL 182 Query: 185 NGVTEQQXXXXXXXXXXXXXXXWLKSVLAGAMGIARSAAQLQMDXXXXXXXXXXXXXXXX 244 E Q W+KS++ G+MGIAR+ D Sbjct: 183 GDRHESQSSSGLIVATGLGSSAWIKSIVTGSMGIARAVRGASTDFDY------------- 229 Query: 245 XIEQRLPWDHPNLYFTVREPFPSRTTSAGLVFGQISGRAPLKITSQMPEDGVIFSDGVES 304 Q WD P L F VREPFPSR+++A LV+GQ++ PL + S+MP+ GVIFSDG+E+ Sbjct: 230 ---QPFAWDAPRLDFAVREPFPSRSSTAELVYGQVTAGQPLTLRSRMPDHGVIFSDGMEA 286 Query: 305 DFLEFNSGVEATITLGEKRGRLVV 328 D+L+F +G++ATI L +++G LVV Sbjct: 287 DYLQFTAGMQATIGLSDRQGCLVV 310 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,636,533,191 Number of extensions: 62482402 Number of successful extensions: 124897 Number of sequences better than 1.0e-05: 41 Number of HSP's gapped: 124861 Number of HSP's successfully gapped: 48 Length of query: 328 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 192 Effective length of database: 1,779,438,163 Effective search space: 341652127296 Effective search space used: 341652127296 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)