BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0397.0018.p (171 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGW2.1 B3KGW2_9BACI GCN5-related N-acetyltransferase 194 2e-48 C2TYN4.1 C2TYN4_BACCE GCN5-related N-acetyltransferase 189 8e-47 C2UWH0.1 C2UWH0_BACCE GCN5-related N-acetyltransferase 187 3e-46 C2VD08.1 C2VD08_BACCE GCN5-related N-acetyltransferase 187 4e-46 A6LY42.1 A6LY42_CLOB8 GCN5-related N-acetyltransferase 186 7e-46 >B3KGW2.1 B3KGW2_9BACI GCN5-related N-acetyltransferase Length = 169 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 94/167 (56%), Positives = 117/167 (70%) Query: 3 MNHEITIKRLEELQPEIIQQLNTLIIDVVADGASIGFLSPLAAEEAEAYWRGVLAPGVLL 62 MN E TI ++ L+ QL L+I VV DGAS+GFL+PL+ +EA AYW+ L PGV L Sbjct: 1 MNQEFTIVEVDRLETNTHHQLTELLIRVVEDGASVGFLAPLSYDEASAYWKDALGPGVTL 60 Query: 63 WVAQEGDSIVGTVQLHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAVAGGR 122 W A + ++GTVQL +K N HRAE+AKLMV P RR GI R LM E A A GR Sbjct: 61 WAAMQDGKMIGTVQLQCATKANGRHRAEVAKLMVDPASRRGGIGRTLMLHLEPKAKAEGR 120 Query: 123 TLLVLDTREGDPSNLLYQSRGFVEVGKIPDYVINSDGEMSATVIYYK 169 TLLVLDTREGDPSN LYQS G+++ G IPDY I+S+G+++ TV+YYK Sbjct: 121 TLLVLDTREGDPSNKLYQSLGYIQAGVIPDYAISSNGQLAGTVLYYK 167 >C2TYN4.1 C2TYN4_BACCE GCN5-related N-acetyltransferase Length = 175 Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 94/163 (57%), Positives = 118/163 (72%), Gaps = 1/163 (0%) Query: 7 ITIKRLEELQPEIIQQLNTLIIDVVADGASIGFLSPLAAEEAEAYWRGVLAPGVLLWVAQ 66 + I+ +++L+ EI + L+ L+ VV DGASIGFL PL +EA YW+ VLAP V+L+VA+ Sbjct: 12 LVIEEMKQLENEI-EDLSKLLTTVVDDGASIGFLPPLEQKEATNYWQAVLAPEVILYVAK 70 Query: 67 EGDSIVGTVQLHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAVAGGRTLLV 126 + + G+VQLH +KPN HRAEI KLM HP RR GI R LM+ AE+ A R+LLV Sbjct: 71 INNEVAGSVQLHLVTKPNGTHRAEICKLMTHPNFRRNGIGRSLMQKAEERAKLENRSLLV 130 Query: 127 LDTREGDPSNLLYQSRGFVEVGKIPDYVINSDGEMSATVIYYK 169 LDTREGDPSN LY+S GF E GKIP Y I+ DGE+ ATVIYYK Sbjct: 131 LDTREGDPSNRLYKSLGFQESGKIPGYAISPDGELDATVIYYK 173 >C2UWH0.1 C2UWH0_BACCE GCN5-related N-acetyltransferase Length = 175 Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 93/163 (57%), Positives = 118/163 (72%), Gaps = 1/163 (0%) Query: 7 ITIKRLEELQPEIIQQLNTLIIDVVADGASIGFLSPLAAEEAEAYWRGVLAPGVLLWVAQ 66 + I+ +++L+ EI + L+ L+ VV DGASIGFL PL +EA YW+ VLAP V+L+VA+ Sbjct: 12 LVIEEMKQLENEI-EDLSKLLTTVVDDGASIGFLPPLEQKEATNYWQTVLAPEVILYVAK 70 Query: 67 EGDSIVGTVQLHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAVAGGRTLLV 126 + + G+VQLH ++PN HRAEI KLM HP RR GI R LM+ AE+ A R+LLV Sbjct: 71 INNEVAGSVQLHLVTRPNGTHRAEICKLMTHPNFRRNGIGRSLMQKAEERAKLENRSLLV 130 Query: 127 LDTREGDPSNLLYQSRGFVEVGKIPDYVINSDGEMSATVIYYK 169 LDTREGDPSN LY+S GF E GKIP Y I+ DGE+ ATVIYYK Sbjct: 131 LDTREGDPSNRLYKSLGFQESGKIPGYAISPDGELDATVIYYK 173 >C2VD08.1 C2VD08_BACCE GCN5-related N-acetyltransferase Length = 175 Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 93/163 (57%), Positives = 117/163 (71%), Gaps = 1/163 (0%) Query: 7 ITIKRLEELQPEIIQQLNTLIIDVVADGASIGFLSPLAAEEAEAYWRGVLAPGVLLWVAQ 66 + I+ +++L+ EI + L+ L+ VV DGASIGFL PL +EA YW+ VLAP V+L+VA+ Sbjct: 12 LVIEEMKQLENEI-EDLSKLLTTVVDDGASIGFLPPLEQKEATNYWQAVLAPEVILYVAK 70 Query: 67 EGDSIVGTVQLHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAVAGGRTLLV 126 + + G+VQLH +KPN HRAEI KLM HP RR I R LM+ AE+ A R+LLV Sbjct: 71 INNEVAGSVQLHLVTKPNGTHRAEICKLMTHPNFRRNSIGRSLMQKAEERAKLENRSLLV 130 Query: 127 LDTREGDPSNLLYQSRGFVEVGKIPDYVINSDGEMSATVIYYK 169 LDTREGDPSN LY+S GF E GKIP Y I+ DGE+ ATVIYYK Sbjct: 131 LDTREGDPSNRLYKSLGFQESGKIPGYAISPDGELDATVIYYK 173 >A6LY42.1 A6LY42_CLOB8 GCN5-related N-acetyltransferase Length = 169 Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 87/168 (51%), Positives = 118/168 (70%) Query: 3 MNHEITIKRLEELQPEIIQQLNTLIIDVVADGASIGFLSPLAAEEAEAYWRGVLAPGVLL 62 MN I + ++ +I+Q+L+ L+I+VV GAS+GFL PL+ E+A+ YWR L GV+L Sbjct: 1 MNKNFEITEITQISDDILQELSLLLINVVEGGASVGFLPPLSLEDAKKYWREALTTGVVL 60 Query: 63 WVAQEGDSIVGTVQLHPESKPNSPHRAEIAKLMVHPEHRRKGIARMLMETAEQAAVAGGR 122 W+A+ I+GTVQLH K N HRAEIAKLMVH + RR+G+ + LME AE+ A A R Sbjct: 61 WIAKVRGRILGTVQLHLCQKQNGTHRAEIAKLMVHSDSRREGLGKCLMENAEKKAKAEQR 120 Query: 123 TLLVLDTREGDPSNLLYQSRGFVEVGKIPDYVINSDGEMSATVIYYKH 170 +L+ LDTR GDPSNLLY+S G++EVG+IP Y + +G + TV YYK Sbjct: 121 SLITLDTRAGDPSNLLYKSIGYIEVGRIPKYARSDNGNLHETVFYYKQ 168 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,030,062,955 Number of extensions: 40013022 Number of successful extensions: 125791 Number of sequences better than 1.0e-05: 278 Number of HSP's gapped: 126148 Number of HSP's successfully gapped: 278 Length of query: 171 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 45 Effective length of database: 1,873,648,313 Effective search space: 84314174085 Effective search space used: 84314174085 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 126 (53.1 bits)