BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0391.0028.p (283 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D5L9.1 B1D5L9_9BACL Putative uncharacterized protein 348 2e-94 B3KE44.1 B3KE44_9BACI Putative uncharacterized protein 327 1e-87 Q81ZA8.1 Q81ZA8_BACAN Putative uncharacterized protein 275 4e-72 C3PBU5.1 C3PBU5_BACAA Putative uncharacterized protein 275 4e-72 C3L5A3.1 C3L5A3_BACAC Putative uncharacterized protein 275 4e-72 >B1D5L9.1 B1D5L9_9BACL Putative uncharacterized protein Length = 266 Score = 348 bits (894), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 165/244 (67%), Positives = 196/244 (80%) Query: 39 NVRILYACESGSRAWGFPSKDSDYDVRFLYLRRPEAYLSIFEQRDVIERPISDLLDINGW 98 N+RILYACESGSRAWGFPSKDSDYDVRFLY+R E YLSI E+RDVIERPIS++LD++GW Sbjct: 22 NIRILYACESGSRAWGFPSKDSDYDVRFLYVRPVEWYLSIRERRDVIERPISEMLDLSGW 81 Query: 99 DLKKGLTLFRKSNPPLLEWLQSPVRYEENYTVAESIRSLSPLGFSPKSCVYHYLHMARGN 158 DL+K L LF KSNPPLLEWLQSP++Y+E +T AE IR+LS FSPKSC+YHYLHMARGN Sbjct: 82 DLRKALALFNKSNPPLLEWLQSPIKYKEPFTTAERIRTLSGATFSPKSCMYHYLHMARGN 141 Query: 159 YRTYLQGSEVKIKKYFYVLRPLLACAWIEKYQEVPPLDFTTLVKDLIPEGSELREAVDRL 218 YR YLQG V+ KKYFYVLRPLLAC WIEKY +PP+ F LV+DLIP S L ++RL Sbjct: 142 YREYLQGETVRAKKYFYVLRPLLACGWIEKYNAMPPMLFEELVEDLIPTDSALYGIIERL 201 Query: 219 LVRKKSGDELNLEPRIEGINKYLEQQISHFEESAARFGSGNGVEDNVLDELFRSALLEVW 278 LVRK++G+EL EPRI +N YLE+QI +FE++A + +G+ D LD LFR ALLE W Sbjct: 202 LVRKRAGEELRTEPRIGRLNDYLEEQIDYFEQAAKDLDTADGLTDEQLDALFRDALLEAW 261 Query: 279 GGES 282 G S Sbjct: 262 GKVS 265 >B3KE44.1 B3KE44_9BACI Putative uncharacterized protein Length = 272 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 147/241 (60%), Positives = 195/241 (80%) Query: 40 VRILYACESGSRAWGFPSKDSDYDVRFLYLRRPEAYLSIFEQRDVIERPISDLLDINGWD 99 V ILYACESGSRAWGFPS DSDYDVRF+Y+R E YLSIF++RDVIERPI+D LD++GWD Sbjct: 24 VLILYACESGSRAWGFPSTDSDYDVRFIYIRPVEWYLSIFDKRDVIERPINDRLDMSGWD 83 Query: 100 LKKGLTLFRKSNPPLLEWLQSPVRYEENYTVAESIRSLSPLGFSPKSCVYHYLHMARGNY 159 LKK L LFRKSNPPLLEWL+SP++Y+E +A+ IRS+SPL FSPKSC++HYL+MA+GNY Sbjct: 84 LKKALGLFRKSNPPLLEWLESPIKYKETLGIAQQIRSISPLAFSPKSCMHHYLNMAKGNY 143 Query: 160 RTYLQGSEVKIKKYFYVLRPLLACAWIEKYQEVPPLDFTTLVKDLIPEGSELREAVDRLL 219 R YLQG +VKIKKYFYVLRP+LAC WI+ Y E+PP++F L L+ +GS L++ +D+LL Sbjct: 144 RMYLQGGDVKIKKYFYVLRPILACDWIQTYNEMPPMEFELLTDRLLDQGSALKQEIDQLL 203 Query: 220 VRKKSGDELNLEPRIEGINKYLEQQISHFEESAARFGSGNGVEDNVLDELFRSALLEVWG 279 +RK+SG+E+N+EP++ IN ++E++++ +E+ + D LD LFR+AL+E WG Sbjct: 204 LRKRSGEEMNIEPKLPIINAFIEEKLNEYEQLTKDKKHQDTDLDQSLDALFRNALVEAWG 263 Query: 280 G 280 Sbjct: 264 A 264 >Q81ZA8.1 Q81ZA8_BACAN Putative uncharacterized protein Length = 260 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 129/243 (53%), Positives = 180/243 (74%), Gaps = 1/243 (0%) Query: 39 NVRILYACESGSRAWGFPSKDSDYDVRFLYLRRPEAYLSIFEQRDVIERPISDLLDINGW 98 +V+IL+A ESGSRAWGFPSKDSDYDVRF+Y+ E YLSI ++RDVIE PISD LDI+GW Sbjct: 17 DVKILFAVESGSRAWGFPSKDSDYDVRFVYMHPVEWYLSIHDKRDVIEYPISDDLDISGW 76 Query: 99 DLKKGLTLFRKSNPPLLEWLQSPVRYEENYTVAESIRSLSPLGFSPKSCVYHYLHMARGN 158 D+KK L LF KSNP LLEW++SP+ Y +N E ++ +S F PK+ +YHYLHMA N Sbjct: 77 DIKKALQLFAKSNPALLEWIRSPIFYSKNSNFPEQLQQMSEKNFDPKATIYHYLHMASKN 136 Query: 159 YRTYLQGSEVKIKKYFYVLRPLLACAWIEKYQEVPPLDFTTLVKDLIPEGSELREAVDRL 218 YR +LQG VK+KKYFYVLRP+LAC W+E+ +PP++F L+ +L+ E S L E +++L Sbjct: 137 YREFLQGENVKLKKYFYVLRPILACKWLEEKTTLPPVEFDRLITELLLERSVLDE-IEQL 195 Query: 219 LVRKKSGDELNLEPRIEGINKYLEQQISHFEESAARFGSGNGVEDNVLDELFRSALLEVW 278 L++KK+G EL++ +IE +N++LE+QI ++++ G+G++ L+ LFR L EV+ Sbjct: 196 LIKKKAGTELDVGLKIEVLNQFLEEQIHYYQQYVKGIEKGSGIDIESLNTLFRDMLFEVY 255 Query: 279 GGE 281 E Sbjct: 256 KKE 258 >C3PBU5.1 C3PBU5_BACAA Putative uncharacterized protein Length = 260 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 129/243 (53%), Positives = 180/243 (74%), Gaps = 1/243 (0%) Query: 39 NVRILYACESGSRAWGFPSKDSDYDVRFLYLRRPEAYLSIFEQRDVIERPISDLLDINGW 98 +V+IL+A ESGSRAWGFPSKDSDYDVRF+Y+ E YLSI ++RDVIE PISD LDI+GW Sbjct: 17 DVKILFAVESGSRAWGFPSKDSDYDVRFVYMHPVEWYLSIHDKRDVIEYPISDDLDISGW 76 Query: 99 DLKKGLTLFRKSNPPLLEWLQSPVRYEENYTVAESIRSLSPLGFSPKSCVYHYLHMARGN 158 D+KK L LF KSNP LLEW++SP+ Y +N E ++ +S F PK+ +YHYLHMA N Sbjct: 77 DIKKALQLFAKSNPALLEWIRSPIFYSKNSNFPEQLQQMSEKNFDPKATIYHYLHMASKN 136 Query: 159 YRTYLQGSEVKIKKYFYVLRPLLACAWIEKYQEVPPLDFTTLVKDLIPEGSELREAVDRL 218 YR +LQG VK+KKYFYVLRP+LAC W+E+ +PP++F L+ +L+ E S L E +++L Sbjct: 137 YREFLQGENVKLKKYFYVLRPILACKWLEEKTTLPPVEFDRLITELLLERSVLDE-IEQL 195 Query: 219 LVRKKSGDELNLEPRIEGINKYLEQQISHFEESAARFGSGNGVEDNVLDELFRSALLEVW 278 L++KK+G EL++ +IE +N++LE+QI ++++ G+G++ L+ LFR L EV+ Sbjct: 196 LIKKKAGTELDVGLKIEVLNQFLEEQIHYYQQYVKGIEKGSGIDIESLNTLFRDMLFEVY 255 Query: 279 GGE 281 E Sbjct: 256 KKE 258 >C3L5A3.1 C3L5A3_BACAC Putative uncharacterized protein Length = 260 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 129/243 (53%), Positives = 180/243 (74%), Gaps = 1/243 (0%) Query: 39 NVRILYACESGSRAWGFPSKDSDYDVRFLYLRRPEAYLSIFEQRDVIERPISDLLDINGW 98 +V+IL+A ESGSRAWGFPSKDSDYDVRF+Y+ E YLSI ++RDVIE PISD LDI+GW Sbjct: 17 DVKILFAVESGSRAWGFPSKDSDYDVRFVYMHPVEWYLSIHDKRDVIEYPISDDLDISGW 76 Query: 99 DLKKGLTLFRKSNPPLLEWLQSPVRYEENYTVAESIRSLSPLGFSPKSCVYHYLHMARGN 158 D+KK L LF KSNP LLEW++SP+ Y +N E ++ +S F PK+ +YHYLHMA N Sbjct: 77 DIKKALQLFAKSNPALLEWIRSPIFYSKNSNFPEQLQQMSEKNFDPKATIYHYLHMASKN 136 Query: 159 YRTYLQGSEVKIKKYFYVLRPLLACAWIEKYQEVPPLDFTTLVKDLIPEGSELREAVDRL 218 YR +LQG VK+KKYFYVLRP+LAC W+E+ +PP++F L+ +L+ E S L E +++L Sbjct: 137 YREFLQGENVKLKKYFYVLRPILACKWLEEKTTLPPVEFDRLITELLLERSVLDE-IEQL 195 Query: 219 LVRKKSGDELNLEPRIEGINKYLEQQISHFEESAARFGSGNGVEDNVLDELFRSALLEVW 278 L++KK+G EL++ +IE +N++LE+QI ++++ G+G++ L+ LFR L EV+ Sbjct: 196 LIKKKAGTELDVGLKIEVLNQFLEEQIHYYQQYVKGIEKGSGIDIESLNTLFRDMLFEVY 255 Query: 279 GGE 281 E Sbjct: 256 KKE 258 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,671,195,450 Number of extensions: 69046114 Number of successful extensions: 152603 Number of sequences better than 1.0e-05: 184 Number of HSP's gapped: 152466 Number of HSP's successfully gapped: 184 Length of query: 283 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 149 Effective length of database: 1,798,280,193 Effective search space: 267943748757 Effective search space used: 267943748757 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)