BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0391.0027.p (485 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q0ATC0.1 Q0ATC0_MARMM Methyltransferase type 12 259 4e-67 A5EI29.1 A5EI29_BRASB Putative uncharacterized protein 244 1e-62 C1RZ66.1 C1RZ66_9SPHI Methyltransferase family protein 239 4e-61 A4YUA9.1 A4YUA9_BRASO Putative uncharacterized protein 239 7e-61 Q1IQ73.1 Q1IQ73_ACIBL Methyltransferase type 12 226 4e-57 >Q0ATC0.1 Q0ATC0_MARMM Methyltransferase type 12 Length = 469 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 172/487 (35%), Positives = 241/487 (49%), Gaps = 29/487 (5%) Query: 1 MHLIIRAVGAGAGMLPHLLAKNPNNLYDRMEKDARVRIVFTASSEEETEAVIFVTPDPVE 60 M L I A L LL KNP N++ + + +S E EA + + DP++ Sbjct: 1 MLLKIATTHQPATDLGFLLRKNPANVHRADLPFGKSVFFYPETSAERCEAALLLEVDPIQ 60 Query: 61 LVKGASSAHND--ITQYINDREFVVSSLFCTYIRSALGTALNGKTKEAFRPWAGRQLVLE 118 LV+G +A D + Y+NDR + SS I L A+ G+ KE A + LE Sbjct: 61 LVRGRKTAKGDGMLAHYVNDRPYAASSFLSVAISRVLRDAMAGRAKER-EDLAATAIPLE 119 Query: 119 LTFGPVASNLPDVALEGLFTALGYEVLLERGHAGYPFDLKSRSSVRYIRLKGMQTLQTAL 178 L P+ D + LF LGYE+ + S R +RLK + L AL Sbjct: 120 LEITPLPCKGNDEIVHRLFEPLGYEIETHTALLDEAYPDWGESPYRTVRLKATKRLADAL 179 Query: 179 RQLFVLIPALDDYKHYYISDDEVDKIRRYGEGWLEDHPQRGLILKRTLRFAGAIRQYESL 238 L+VLIP LD+ KHY++ DEV+K+ WL+ HP+R LI R LR + +L Sbjct: 180 THLYVLIPVLDNAKHYWVGSDEVEKLIDKAGDWLQSHPERDLIANRYLRKRQFAQDALTL 239 Query: 239 MSS--GGHLEGTQAPDEVSREVAGEEALSLPGTTXXXXXXXXXXPKVRLNDLRYAAIADV 296 + G + T+ P+ + AGEEAL P +RLNDLRY A+ Sbjct: 240 LDEKFGIAEDETEEPE----QAAGEEALEKP---------------MRLNDLRYEAVTAA 280 Query: 297 VENLPLRRSIVDFGSGEGKLSARLSSVPGVREIKAVEPSAAAQLRAMDRFAKLEGKAGIQ 356 + RR + D GSGEGKL RL + ++ VE S +L +R KLE + Q Sbjct: 281 LLKTGARR-VCDLGSGEGKLLRRLMQEKSIEYVQGVEVS-TPELEKSERKLKLERMSPSQ 338 Query: 357 VP--EPVTGSLFYYDESLRNKDVMILCEVIEHIDEYRLGRVMDTIFHEYTPGTLIITTPN 414 + V GSL Y DE L D + L EVIEH+D RL + +F + PG ++++TPN Sbjct: 339 RARIDIVRGSLVYEDERLNGFDAITLVEVIEHVDAERLDALERVVFAKARPGAVLVSTPN 398 Query: 415 KEYNEVYE-MDQEEMRHGDHRFEWSREAFAAWCSRWTEAYNYSVRLSGIGGFAQDYGYPT 473 E+N+ +E ++ +RH DHRFEW+R F AW E Y V GIG ++GYPT Sbjct: 399 IEFNQTFENLEAGRLRHADHRFEWTRAEFEAWAQGVCERQGYEVAFEGIGEAHNEFGYPT 458 Query: 474 QMAIFTK 480 QMA+FT+ Sbjct: 459 QMAVFTR 465 >A5EI29.1 A5EI29_BRASB Putative uncharacterized protein Length = 459 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 169/493 (34%), Positives = 239/493 (48%), Gaps = 47/493 (9%) Query: 1 MHLIIRAVGAGAGMLPHLLAKNPNNLYDRMEKDARVRIVFTASSEEETEAVIFVTPDPVE 60 M+L I A L LL K+P+ L++ R IV+ +SE EA + + DP+ Sbjct: 1 MYLSIATTHQPATDLGFLLNKHPDRLHELALTYGRALIVYPEASEARCEAALLLDVDPIG 60 Query: 61 LVKGASSAHNDITQYINDREFVVSSLFCTYIRSALGTALNGKTKEAFRPWAGRQLVLELT 120 LV+G + + QY+NDR + SS + A TA+NG A + A + LE Sbjct: 61 LVRGKGQSDGLLDQYVNDRPYAASSFLSVALNKAFRTAMNG-VSSARQELADSAIPLEAV 119 Query: 121 FGPVASNLPDVALEGLFTALGYEVLLER--GHAGYPFDLKSRSSVRYIRL--KGMQTLQT 176 P+ + L LF LG++V L G G P + RY+RL +G L Sbjct: 120 VTPLPLRGGETLLRQLFEPLGWDVTLAPIPGPQGDP-------TSRYVRLTLRGTTRLAA 172 Query: 177 ALRQLFVLIPALDDYKHYYISDDEVDKIRRYGEGWLEDHPQRGLILKRTLRFAGAIRQYE 236 L L+VLIP +DD KHY++ D+E+DK+ + GEGWL+ HP R LI++R LR G + + Sbjct: 173 LLNHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPARELIVRRYLRHRGVLAR-- 230 Query: 237 SLMSSGGHLEGTQAPDEVSREVAG--EEALSLPGTTXXXXXXXXXXPKVRLNDLRYAAIA 294 ++ L + + E G EE L P +RLNDLR AA+A Sbjct: 231 ---AALARLVPETEDEALEPEAQGASEETLEAP---------------IRLNDLRLAAVA 272 Query: 295 DVVENLPLRRSIVDFGSGEGKLSARLSSVPGVREIKAVEPSAAAQLRAMDRF------AK 348 + + ++ D G GEGKL L V + ++P+A RA R Sbjct: 273 EALRTTGA-STVADLGCGEGKLLQLLLRERWVTRLIGLDPAARELERAAKRLKLGMLGGP 331 Query: 349 LEGKAGIQVPEPVTGSLFYYDESLRNKDVMILCEVIEHIDEYRLGRVMDTIFHEYTPGTL 408 EG+ + + GSL Y D D L EVIEH+D RL V +F P + Sbjct: 332 PEGRVTL-----LHGSLTYRDARWAEADAAALVEVIEHLDPDRLPMVERVVFGAARPRAV 386 Query: 409 IITTPNKEYNEVYEMDQE-EMRHGDHRFEWSREAFAAWCSRWTEAYNYSVRLSGIGGFAQ 467 ++TTPN +YN ++ RH DHRFEWSR FA W +R ++NY V SGIG Sbjct: 387 VVTTPNADYNALFPSQPAGGFRHRDHRFEWSRAEFAGWAARVCASFNYQVAFSGIGRHDD 446 Query: 468 DYGYPTQMAIFTK 480 +G PTQMA+FT+ Sbjct: 447 THGTPTQMAVFTR 459 >C1RZ66.1 C1RZ66_9SPHI Methyltransferase family protein Length = 465 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 158/490 (32%), Positives = 240/490 (48%), Gaps = 40/490 (8%) Query: 1 MHLIIRAVGAGAGMLPHLLAKNPNNLYDRMEKDARVRIVFTASSEEETEAVIFVTPDPVE 60 M L I A L +LL K+P + D + I + ++E+E + + DPV Sbjct: 1 MLLTITTRHMPATDLGYLLHKHPAKVQDIELSKGKAHIFYPVATEQECTCAMVLDIDPVG 60 Query: 61 LVK---GASSAHNDITQYINDREFVVSSLFCTYIRSALGTALNGKTKEAFRP-WAGRQLV 116 LV+ G S + + QY+NDR +V SS+ I A +ALNGK K+ +P + Sbjct: 61 LVRANEGPSGNNFALEQYVNDRPYVASSIMSNAISKAFASALNGKCKD--KPEMVEMPMP 118 Query: 117 LELTFGPVASNLPDVALEGLFTALGYEVLLERGHAGYPFDLKSRSSVRYIRLKGMQTLQT 176 E+ + N + ++ +F LGY V + F S + LK TLQ+ Sbjct: 119 FEVKLSVLPVNGGEQMIQRMFGPLGYTVNATQYTLDDKFPEWGHSRYFTVVLKHTVTLQS 178 Query: 177 ALRQLFVLIPALDDYKHYYISDDEVDKIRRYGEGWLEDHPQRGLILKRTLRFAGAIRQYE 236 L L++LIP LD+ KHY+++ +EV+K+ G+GWL+ HP+R LI +R LR + Sbjct: 179 LLTHLYILIPVLDNDKHYWVNKEEVEKLLAKGKGWLDKHPERELISRRYLR------HQK 232 Query: 237 SLMSSGGHLEGTQAPDEVSREVAGEEALSLPGTTXXXXXXXXXXPKVRLNDLRYAAIADV 296 SLM+ + D++ E+ E +S P P +L+D R + D Sbjct: 233 SLMNDAMSM---LMKDDIPEELVEAEMISEP-----------EIPTPKLHDSRLQLVCDE 278 Query: 297 VENLPLRRSIVDFGSGEGKLSARLSSVPGVREIKAVEPSAAAQLRAMDRFAKLEGKAGIQ 356 + + P+R S++D G GEGKL L + + I ++ S+ A R Q Sbjct: 279 LLSTPVR-SVLDLGCGEGKLLKLLMAHQQLTHITGMDVSSRTLEVAYRRLKYY------Q 331 Query: 357 VPEP-------VTGSLFYYDESLRNKDVMILCEVIEHIDEYRLGRVMDTIFHEYTPGTLI 409 +P+ + GSL Y D + D L EVIEH+D RL + T+F P ++ Sbjct: 332 LPDNQRKRLRLILGSLVYRDRRIEGFDAAALVEVIEHLDHERLKALEKTVFEYAKPAKVV 391 Query: 410 ITTPNKEYNEVYEMDQEEMRHGDHRFEWSREAFAAWCSRWTEAYNYSVRLSGIGGFAQDY 469 +TTPNKE+N + D MRH DHRFEW+R F+ WC + + Y Y+ + IG A+ Sbjct: 392 VTTPNKEWNITFTEDTSMMRHNDHRFEWTRAEFSTWCEKISTTYGYTYVIKAIGDEAEKV 451 Query: 470 GYPTQMAIFT 479 G PTQMA+FT Sbjct: 452 GAPTQMAVFT 461 >A4YUA9.1 A4YUA9_BRASO Putative uncharacterized protein Length = 468 Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 169/487 (34%), Positives = 237/487 (48%), Gaps = 35/487 (7%) Query: 1 MHLIIRAVGAGAGMLPHLLAKNPNNLYDRMEKDARVRIVFTASSEEETEAVIFVTPDPVE 60 M L I A L LL K+P+ L++ + I + +SE EA + + DP+ Sbjct: 10 MFLSIATTHQPATDLGFLLNKHPDRLHEFELTSGKALIFYPEASEARCEAALVLDVDPIG 69 Query: 61 LVKGASSAHNDITQYINDREFVVSSLFCTYIRSALGTALNGKTKEAFRPWAGRQLVLELT 120 LV+G + + QY+NDR + SS + A TA+NG A + A + LE Sbjct: 70 LVRGKGQSDGLLDQYVNDRPYAASSFLSVALNKAFRTAMNG-VSSARQELADSAIPLEAV 128 Query: 121 FGPVASNLPDVALEGLFTALGYEVLLERGHAGYPFDLKSRSSVRYIRL--KGMQTLQTAL 178 P+ + + LF LG++V L AG D SR Y+RL +G L L Sbjct: 129 VTPLPLRGGETVVRQLFEPLGWDVSLT-PIAGPQGDTTSR----YVRLTLRGTNRLSALL 183 Query: 179 RQLFVLIPALDDYKHYYISDDEVDKIRRYGEGWLEDHPQRGLILKRTLRFAGAIRQYESL 238 L+VLIP +DD KHY++ D+E+DK+ + GEGWL+ HP + LI++R LR G + + Sbjct: 184 NHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPAKELIVRRYLRHRGVLARAALA 243 Query: 239 MSSGGHLEGTQAPDEVSREVAGEEALSLPGTTXXXXXXXXXXPKVRLNDLRYAAIADVVE 298 + E E + EE L P +RLNDLR AA+ + + Sbjct: 244 RLAP---ETQDEALETETQSQSEETLEAP---------------IRLNDLRLAAVVEALR 285 Query: 299 NLPLRRSIVDFGSGEGKLSARLSSVPGVREIKAVEPSAAAQLRAMDRFAKLEGKAGIQVP 358 + R+I D G GEGKL L + ++P+A RA R KL G P Sbjct: 286 D-SGARTIADLGCGEGKLLQLLLRERFAERLIGLDPAARELERAAKRL-KLGAPGG--PP 341 Query: 359 EP----VTGSLFYYDESLRNKDVMILCEVIEHIDEYRLGRVMDTIFHEYTPGTLIITTPN 414 E + GSL Y D + D L EVIEH+D RL V +F P +I+TTPN Sbjct: 342 EGRVTLLHGSLTYRDARWADADAAALVEVIEHLDPDRLPMVERVVFGAARPRVVIVTTPN 401 Query: 415 KEYNEVY-EMDQEEMRHGDHRFEWSREAFAAWCSRWTEAYNYSVRLSGIGGFAQDYGYPT 473 +YN ++ + + RH DHRFEW+R FAAW R E +N V SGIG + G PT Sbjct: 402 ADYNALFPSLPAGQFRHRDHRFEWTRAEFAAWAQRVCETFNCQVAFSGIGHHDETLGAPT 461 Query: 474 QMAIFTK 480 QMA+FT+ Sbjct: 462 QMAVFTR 468 >Q1IQ73.1 Q1IQ73_ACIBL Methyltransferase type 12 Length = 465 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 165/493 (33%), Positives = 241/493 (48%), Gaps = 41/493 (8%) Query: 1 MHLIIRAVGAGAGMLPHLLAKNPNNLYDRMEKDARVRIVFTASSEEETEAVIFVTPDPVE 60 M L I A L +LL K+P L+ + I + ++ E + + DP+ Sbjct: 1 MLLTITNERTPATDLGYLLHKSPERLHSFSLAYGKAHIFYPEATPERCTVALLLEIDPIG 60 Query: 61 LVK---GASSAHNDITQYINDREFVVSSLFCTYIRSALGTALNGKTKEAFRPWAG---RQ 114 LV+ G S ++ + Y+NDR +V SS + LGTA+ GK+K AG Sbjct: 61 LVRNRRGPSGDNHSLEHYVNDRPYVASSFLSVALARVLGTAMAGKSKHR----AGLVDEP 116 Query: 115 LVLELTFGPVASNLPDVALEGLFTALGYEVLLERGHAGYPFDLKSRSSVRYIRLKGMQTL 174 L L + S + A+ LF LGYEV ER F + + L+ T+ Sbjct: 117 LPLTAKLAVIFSRGGEEAIRKLFAPLGYEVKAERHPLDENFPEWGQGPYYALELRKEVTV 176 Query: 175 QTALRQLFVLIPALDDYKHYYISDDEVDKIRRYGEGWLEDHPQRGLILKRTLRFAGAIRQ 234 + L L+VLIP LD KHY++ DDEVDK+ R GEGWL+ HP+R I++R L+ G + Sbjct: 177 RELLNHLYVLIPVLDPDKHYWVGDDEVDKLLRKGEGWLKTHPERDYIVRRYLKRRGRL-- 234 Query: 235 YESLMSSGGHLEGTQAPD-EVSREVAGEEALSLPGTTXXXXXXXXXXPKVRLNDLRYAAI 293 + M+ ++ T PD E+ ++ EE + P ++L++ R A+ Sbjct: 235 --TRMALARLVDETPDPDAELEKKTQQEEEIEKP---------------LKLHEQRLNAV 277 Query: 294 ADVVENLPLRRSIVDFGSGEGKLSARLSSVPGVREIKAVEPSAAAQLRAMDRFAKLEG-- 351 A+ ++ +R +VD G GEGKL L +EI ++ S + A DR KLE Sbjct: 278 AEKLKEAGAQR-VVDLGCGEGKLLRALLKEKQFKEIFGMDVSYRSLEIAADRL-KLETMP 335 Query: 352 ---KAGIQVPEPVTGSLFYYDESLRNKDVMILCEVIEHIDEYRLGRVMDTIFHEYTPGTL 408 K IQ+ V GSL Y D+ + D + EVIEH+DE RL +F P T+ Sbjct: 336 PTQKKRIQL---VQGSLMYRDKRIAGFDGATVVEVIEHLDEPRLAAFERVLFDFAKPSTV 392 Query: 409 IITTPNKEYNEVYE-MDQEEMRHGDHRFEWSREAFAAWCSRWTEAYNYSVRLSGIGGFAQ 467 +ITTPN EYN +E + +MRH DHRFEW+R F W + Y Y+V IG Q Sbjct: 393 VITTPNSEYNVKFETLPAGQMRHKDHRFEWTRAQFQDWATALAARYGYTVSFFPIGDEDQ 452 Query: 468 DYGYPTQMAIFTK 480 G P+QM +F + Sbjct: 453 VVGAPSQMGVFQR 465 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,848,305,761 Number of extensions: 114999468 Number of successful extensions: 264806 Number of sequences better than 1.0e-05: 107 Number of HSP's gapped: 264546 Number of HSP's successfully gapped: 117 Length of query: 485 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 345 Effective length of database: 1,741,754,103 Effective search space: 600905165535 Effective search space used: 600905165535 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)