BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0391.0023.p (324 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZJL9.1 C0ZJL9_BREBN Putative undecaprenyl-phosphate N-acetylgl... 472 e-131 B1DA15.1 B1DA15_9BACL Glycosyl transferase family 4 465 e-129 B3KDT8.1 B3KDT8_9BACI Glycosyl transferase family 4 403 e-110 B8G0S1.1 B8G0S1_DESHD Glycosyl transferase family 4 361 4e-98 Q251C3.1 Q251C3_DESHY Putative uncharacterized protein 356 2e-96 >C0ZJL9.1 C0ZJL9_BREBN Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase EC=2.7.8.- Length = 322 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 240/309 (77%), Positives = 275/309 (88%) Query: 3 VIVIFYVLAFLVSFCIVYLLIPPLGRLAFRLDFVDKPRKDVERKIHREPIPLTASYAIFI 62 ++ I Y L+FL+SFCIV +LIPPL +LAFRLDFVDKPRKDVERKIHREPIPLTASYAIF+ Sbjct: 1 MVTITYALSFLLSFCIVMVLIPPLAKLAFRLDFVDKPRKDVERKIHREPIPLTASYAIFV 60 Query: 63 GFFITYLLFTRDFSLGTLALFIGGVLLLTIGTIDDWYKTKGKDFPALPKFIVQIAAAILV 122 GF ++LLF+++ + T+A+ G +LLL IGTIDDWYKT+GKDF ALPK IVQI+AA++V Sbjct: 61 GFAASFLLFSKESTGQTIAVLSGSLLLLIIGTIDDWYKTQGKDFSALPKLIVQISAAVIV 120 Query: 123 FLSGNAFTGFFNPFSGDYISLPVILQFVLTILWIFGVTTVINFSDGMDGLAGGLTAISAM 182 +LSG F+GF+NP SG+YI LP LQF+LTILWIFGVTTVINFSDGMDGLAGGL+AISA Sbjct: 121 YLSGITFSGFYNPLSGEYILLPQWLQFILTILWIFGVTTVINFSDGMDGLAGGLSAISAG 180 Query: 183 TLFVVALAKGQSASAMMAITLVGVTIAYLRYNKAPAKIFMGDAGATFLGYILAVIALDGA 242 TLFVVAL KGQS SA+MAI+L+GV +AYLRYNK PAKIFMGDAGATFLG+ILAVIALDGA Sbjct: 181 TLFVVALVKGQSTSAIMAISLIGVALAYLRYNKPPAKIFMGDAGATFLGFILAVIALDGA 240 Query: 243 FKQATVLSLFIPILALGVPIFDNLFVVIKRFVQGKSIYQADATQVHYRLLKAGLNQKQVV 302 FKQATVLSLFIPILALGVPIFDNLFVV KRF+QGK IYQADA+QVHYRLL++GLN KQVV Sbjct: 241 FKQATVLSLFIPILALGVPIFDNLFVVTKRFLQGKPIYQADASQVHYRLLRSGLNPKQVV 300 Query: 303 AVLYLASVC 311 L L SVC Sbjct: 301 TFLCLISVC 309 >B1DA15.1 B1DA15_9BACL Glycosyl transferase family 4 Length = 324 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 235/311 (75%), Positives = 272/311 (87%) Query: 1 MAVIVIFYVLAFLVSFCIVYLLIPPLGRLAFRLDFVDKPRKDVERKIHREPIPLTASYAI 60 M VI I YV AFL+SF V +LIPP +LAF++DFVD+PRKDVERK+HR+PIPLTA YAI Sbjct: 1 MVVIAILYVAAFLLSFVTVLVLIPPFSKLAFKIDFVDRPRKDVERKLHRKPIPLTAGYAI 60 Query: 61 FIGFFITYLLFTRDFSLGTLALFIGGVLLLTIGTIDDWYKTKGKDFPALPKFIVQIAAAI 120 FIGFFI YL RDFS+ T A+F+GG+LLL IGT+DDWYKTKGKDFPALPK IVQ++AA+ Sbjct: 61 FIGFFIAYLAVVRDFSMQTGAIFLGGLLLLAIGTVDDWYKTKGKDFPALPKLIVQLSAAV 120 Query: 121 LVFLSGNAFTGFFNPFSGDYISLPVILQFVLTILWIFGVTTVINFSDGMDGLAGGLTAIS 180 LV+ SG FTGF NPFSG Y+ LPV+LQFVLT LWIFGVTTVINFSDG+DGLAGGL+AIS Sbjct: 121 LVYASGVVFTGFVNPFSGHYVELPVLLQFVLTTLWIFGVTTVINFSDGLDGLAGGLSAIS 180 Query: 181 AMTLFVVALAKGQSASAMMAITLVGVTIAYLRYNKAPAKIFMGDAGATFLGYILAVIALD 240 AMTLF+VALA GQS SA MAI LVG+T+AYLR+NK PAKIFMGDAGATFLG++LAVI+LD Sbjct: 181 AMTLFIVALAMGQSNSANMAIILVGITLAYLRFNKPPAKIFMGDAGATFLGFMLAVISLD 240 Query: 241 GAFKQATVLSLFIPILALGVPIFDNLFVVIKRFVQGKSIYQADATQVHYRLLKAGLNQKQ 300 GAFKQAT LS+FIPILALGVPIFDNL+V++KRF+QGK+IYQADA+Q HYRLL+AGLN KQ Sbjct: 241 GAFKQATALSIFIPILALGVPIFDNLYVMLKRFLQGKAIYQADASQAHYRLLRAGLNHKQ 300 Query: 301 VVAVLYLASVC 311 + VL L C Sbjct: 301 ALMVLCLMGTC 311 >B3KDT8.1 B3KDT8_9BACI Glycosyl transferase family 4 Length = 320 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/306 (63%), Positives = 240/306 (78%) Query: 6 IFYVLAFLVSFCIVYLLIPPLGRLAFRLDFVDKPRKDVERKIHREPIPLTASYAIFIGFF 65 + Y AF++S +V +LIPP +LA ++DFVDKPR D ERKIHREPIPLTA AIFIGFF Sbjct: 1 MLYFAAFVISMVLVLVLIPPFRKLAIKIDFVDKPRPDSERKIHREPIPLTAGVAIFIGFF 60 Query: 66 ITYLLFTRDFSLGTLALFIGGVLLLTIGTIDDWYKTKGKDFPALPKFIVQIAAAILVFLS 125 ITY T S + +FIG L+L IG +DDWYK++GK+ +LPK IVQ++AA++V+ Sbjct: 61 ITYFALTGTISREAVGIFIGSALILGIGLVDDWYKSQGKELASLPKLIVQVSAAVVVYSY 120 Query: 126 GNAFTGFFNPFSGDYISLPVILQFVLTILWIFGVTTVINFSDGMDGLAGGLTAISAMTLF 185 G AF GF NPF+G YI+LP LQ +LTILWIFGVTTVINFSDG+DGLAGGL+AIS TLF Sbjct: 121 GIAFEGFNNPFTGHYINLPEWLQLILTILWIFGVTTVINFSDGIDGLAGGLSAISGGTLF 180 Query: 186 VVALAKGQSASAMMAITLVGVTIAYLRYNKAPAKIFMGDAGATFLGYILAVIALDGAFKQ 245 VVA+ G+ SA++A+ LVG + YLRYNK PA++FMGDAGATFLG+IL +IALDGAFK Sbjct: 181 VVAITMGRGESALLAVILVGAALGYLRYNKPPARVFMGDAGATFLGFILGIIALDGAFKG 240 Query: 246 ATVLSLFIPILALGVPIFDNLFVVIKRFVQGKSIYQADATQVHYRLLKAGLNQKQVVAVL 305 AT+ SLF+PI ALGVPIFDN+ VVI+R +Q K IYQADA+Q HYRLL GLNQKQ + L Sbjct: 241 ATLASLFVPIFALGVPIFDNIIVVIRRMLQSKPIYQADASQAHYRLLATGLNQKQTLVFL 300 Query: 306 YLASVC 311 L ++C Sbjct: 301 CLLNLC 306 >B8G0S1.1 B8G0S1_DESHD Glycosyl transferase family 4 Length = 330 Score = 361 bits (927), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 182/306 (59%), Positives = 236/306 (77%), Gaps = 5/306 (1%) Query: 6 IFYVLAFLVSFCIVYLLIPPLGRLAFRLDFVDKPRKDVERKIHREPIPLTASYAIFIGFF 65 ++Y L F+ F IV++ IP L +LA + +FVDKP ERK H+ PIPL IF+GF Sbjct: 17 VYYPLFFV--FFIVFMSIPLLEKLAVKWNFVDKP---TERKKHKHPIPLLGGVGIFLGFM 71 Query: 66 ITYLLFTRDFSLGTLALFIGGVLLLTIGTIDDWYKTKGKDFPALPKFIVQIAAAILVFLS 125 I YL+F R + +LA+ I VL+L IG IDDWYKT GK+FPALP+ +V I AA +VF + Sbjct: 72 IGYLVFVRPINYQSLAIIIASVLVLGIGLIDDWYKTLGKEFPALPRLMVHILAAWMVFSA 131 Query: 126 GNAFTGFFNPFSGDYISLPVILQFVLTILWIFGVTTVINFSDGMDGLAGGLTAISAMTLF 185 G F GF NPF+ YI LP I+Q +L+I+WI GVTTVIN+SDG+DGLAG L+AI+ TL+ Sbjct: 132 GIVFYGFTNPFTQQYIVLPYIIQLILSIMWIVGVTTVINWSDGIDGLAGILSAIAGATLY 191 Query: 186 VVALAKGQSASAMMAITLVGVTIAYLRYNKAPAKIFMGDAGATFLGYILAVIALDGAFKQ 245 V ALAKGQS SA+++ LVG ++ +LRYN+ PA+IFMGD+GA FLG+ILA++AL GAFKQ Sbjct: 192 VAALAKGQSDSALLSALLVGASLGFLRYNRHPARIFMGDSGANFLGFILAIVALSGAFKQ 251 Query: 246 ATVLSLFIPILALGVPIFDNLFVVIKRFVQGKSIYQADATQVHYRLLKAGLNQKQVVAVL 305 AT++SL IP+LALGVPIFDNL VV+KRF +G+SIY+ADATQ+H+RL+ +GLN KQ VA + Sbjct: 252 ATLVSLSIPVLALGVPIFDNLIVVLKRFSRGESIYKADATQIHHRLISSGLNPKQTVAFI 311 Query: 306 YLASVC 311 L SVC Sbjct: 312 SLMSVC 317 >Q251C3.1 Q251C3_DESHY Putative uncharacterized protein Length = 317 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 174/289 (60%), Positives = 224/289 (77%), Gaps = 3/289 (1%) Query: 23 IPPLGRLAFRLDFVDKPRKDVERKIHREPIPLTASYAIFIGFFITYLLFTRDFSLGTLAL 82 IP L +LA + +FVDKP ERK H+ PIPL IF+GF I YL+F R + +LA+ Sbjct: 19 IPLLEKLAVKWNFVDKP---TERKKHKHPIPLLGGVGIFLGFMIGYLVFVRPINYQSLAI 75 Query: 83 FIGGVLLLTIGTIDDWYKTKGKDFPALPKFIVQIAAAILVFLSGNAFTGFFNPFSGDYIS 142 I VL+L IG IDDWYKT GK+FPALP+ +V I AA +VF +G F GF NPF+ YI Sbjct: 76 IIASVLVLGIGLIDDWYKTLGKEFPALPRLMVHILAAWMVFSAGIVFYGFTNPFTQQYIV 135 Query: 143 LPVILQFVLTILWIFGVTTVINFSDGMDGLAGGLTAISAMTLFVVALAKGQSASAMMAIT 202 LP I+Q +L+I+WI GVTTVIN+SDG+DGLAG L++I+ TL+V ALAKGQS SA+++ Sbjct: 136 LPYIIQLILSIMWIVGVTTVINWSDGIDGLAGILSSIAGATLYVAALAKGQSDSALLSAL 195 Query: 203 LVGVTIAYLRYNKAPAKIFMGDAGATFLGYILAVIALDGAFKQATVLSLFIPILALGVPI 262 LVG + +LRYN+ PA+IFMGD+GA FLG+ILA++AL GAFKQAT++SL IP+LALGVPI Sbjct: 196 LVGAALGFLRYNRHPARIFMGDSGANFLGFILAIVALSGAFKQATLVSLSIPVLALGVPI 255 Query: 263 FDNLFVVIKRFVQGKSIYQADATQVHYRLLKAGLNQKQVVAVLYLASVC 311 FDN+ VV+KRF +G+SIY+ADATQ+H+RL+ +GLN KQ VA + L SVC Sbjct: 256 FDNIIVVLKRFSRGESIYKADATQIHHRLISSGLNPKQTVAFISLMSVC 304 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.332 0.147 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,709,947,269 Number of extensions: 71028373 Number of successful extensions: 265498 Number of sequences better than 1.0e-05: 2647 Number of HSP's gapped: 261569 Number of HSP's successfully gapped: 2649 Length of query: 324 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 188 Effective length of database: 1,779,438,163 Effective search space: 334534374644 Effective search space used: 334534374644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 131 (55.1 bits)