BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0391.0022.p (227 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2W9Y5.1 C2W9Y5_BACCE Putative uncharacterized protein 311 4e-83 C3BMC4.1 C3BMC4_9BACI Putative uncharacterized protein 310 8e-83 C3B5E1.1 C3B5E1_BACMY Putative uncharacterized protein 309 1e-82 C3AN05.1 C3AN05_BACMY Putative uncharacterized protein 309 1e-82 C0ZEE2.1 C0ZEE2_BREBN Putative uncharacterized protein 293 9e-78 >C2W9Y5.1 C2W9Y5_BACCE Putative uncharacterized protein Length = 243 Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 147/226 (65%), Positives = 174/226 (76%) Query: 1 MKYEVILFDADDTLFDYRMAESRALYNAFAHFGLPTGAEDYAASYKEINAALWKDLEQGR 60 MKY VI FD DDTLFD+ M+E AL+ F FGLPTG DY SYKEI+ LW+ LEQG Sbjct: 11 MKYNVIFFDVDDTLFDFSMSEKNALHKVFEDFGLPTGEVDYKNSYKEISKVLWRKLEQGT 70 Query: 61 TTSAVLRVERFNRLFAAHKLDLSPEAFSEAYLKFLGEGTFLIQGAVELCRELAGCRLAII 120 TT + L VERF RLF H L++ + AYL +LG+ L+ GAV++C L GCRLAII Sbjct: 71 TTLSELGVERFRRLFLEHNLEIDAATCNSAYLTYLGKEVHLVPGAVDVCNSLTGCRLAII 130 Query: 121 TNGIKDVQLSRIQGSPLSSTFEQIIISEEAGCQKPERGIFDYAFAKLGISDRSKVLIVGD 180 TNG VQ SRI+GSPLS+TFE +IISEEAG QKP++GIF+YAF+KL I+D++KVLIVGD Sbjct: 131 TNGFASVQKSRIEGSPLSATFEHLIISEEAGFQKPDQGIFEYAFSKLKITDKTKVLIVGD 190 Query: 181 SLTSDIQGGINYGIDTCWFNPLGKEGAPGIHPTYEIRELSELLEIT 226 SLTSDIQGGINYGIDTCWFNP GKE GI PTYEIREL+E++EI Sbjct: 191 SLTSDIQGGINYGIDTCWFNPNGKENHIGIQPTYEIRELTEMIEIV 236 >C3BMC4.1 C3BMC4_9BACI Putative uncharacterized protein Length = 235 Score = 310 bits (793), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 147/226 (65%), Positives = 173/226 (76%) Query: 1 MKYEVILFDADDTLFDYRMAESRALYNAFAHFGLPTGAEDYAASYKEINAALWKDLEQGR 60 MKY+VILFD DDTLFD+ M+E +AL F FGLPTG DY SYKEIN LW+DLEQG Sbjct: 5 MKYKVILFDVDDTLFDFSMSEKKALNKTFVDFGLPTGLVDYEDSYKEINRVLWRDLEQGI 64 Query: 61 TTSAVLRVERFNRLFAAHKLDLSPEAFSEAYLKFLGEGTFLIQGAVELCRELAGCRLAII 120 T + L VERF RLF AHKL+++ + F+ YL +LG ++ GAV+LC+ LA CRLAII Sbjct: 65 LTLSELGVERFRRLFLAHKLEINADIFNSIYLGYLGTEIHMVSGAVDLCKTLADCRLAII 124 Query: 121 TNGIKDVQLSRIQGSPLSSTFEQIIISEEAGCQKPERGIFDYAFAKLGISDRSKVLIVGD 180 TNG DVQ SRI+GSPL TFE IIISEE G QKP RGIFDYAF+KL I+D+ VLI+GD Sbjct: 125 TNGFTDVQKSRIKGSPLCDTFEHIIISEEVGFQKPARGIFDYAFSKLQITDKESVLIIGD 184 Query: 181 SLTSDIQGGINYGIDTCWFNPLGKEGAPGIHPTYEIRELSELLEIT 226 SLTSDIQGGINYGIDTCWFNP KE GI PTYEIR+L++++ I Sbjct: 185 SLTSDIQGGINYGIDTCWFNPYRKENNMGIKPTYEIRDLTDIIRIV 230 >C3B5E1.1 C3B5E1_BACMY Putative uncharacterized protein Length = 235 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 147/226 (65%), Positives = 172/226 (76%) Query: 1 MKYEVILFDADDTLFDYRMAESRALYNAFAHFGLPTGAEDYAASYKEINAALWKDLEQGR 60 MKY+VILFD DDTLFD+ M+E +AL F FGLPTG DY SYKEIN LW+DLEQG Sbjct: 5 MKYKVILFDVDDTLFDFSMSEKKALNKTFVDFGLPTGLVDYEDSYKEINKVLWRDLEQGI 64 Query: 61 TTSAVLRVERFNRLFAAHKLDLSPEAFSEAYLKFLGEGTFLIQGAVELCRELAGCRLAII 120 T + L VERF RLF AHKL+++ + F+ YL +LG ++ GAV+LC LA CRLAII Sbjct: 65 LTLSELGVERFRRLFLAHKLEINADIFNSIYLGYLGTEIHMVSGAVDLCNTLADCRLAII 124 Query: 121 TNGIKDVQLSRIQGSPLSSTFEQIIISEEAGCQKPERGIFDYAFAKLGISDRSKVLIVGD 180 TNG DVQ SRI+GSPL TFE IIISEE G QKP RGIFDYAF+KL I+D+ VLI+GD Sbjct: 125 TNGFTDVQKSRIKGSPLCDTFEHIIISEEVGFQKPARGIFDYAFSKLQITDKESVLIIGD 184 Query: 181 SLTSDIQGGINYGIDTCWFNPLGKEGAPGIHPTYEIRELSELLEIT 226 SLTSDIQGGINYGIDTCWFNP KE GI PTYEIR+L++++ I Sbjct: 185 SLTSDIQGGINYGIDTCWFNPYRKENNMGIKPTYEIRDLTDIIRIV 230 >C3AN05.1 C3AN05_BACMY Putative uncharacterized protein Length = 235 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 147/226 (65%), Positives = 172/226 (76%) Query: 1 MKYEVILFDADDTLFDYRMAESRALYNAFAHFGLPTGAEDYAASYKEINAALWKDLEQGR 60 MKY+VILFD DDTLFD+ M+E +AL F FGLPTG DY SYKEIN LW+DLEQG Sbjct: 5 MKYKVILFDVDDTLFDFSMSEKKALNKTFVDFGLPTGLVDYEDSYKEINKVLWRDLEQGI 64 Query: 61 TTSAVLRVERFNRLFAAHKLDLSPEAFSEAYLKFLGEGTFLIQGAVELCRELAGCRLAII 120 T + L VERF RLF AHKL+++ + F+ YL +LG ++ GAV+LC LA CRLAII Sbjct: 65 LTLSELGVERFRRLFLAHKLEINADIFNSIYLGYLGTEIHMVSGAVDLCNTLADCRLAII 124 Query: 121 TNGIKDVQLSRIQGSPLSSTFEQIIISEEAGCQKPERGIFDYAFAKLGISDRSKVLIVGD 180 TNG DVQ SRI+GSPL TFE IIISEE G QKP RGIFDYAF+KL I+D+ VLI+GD Sbjct: 125 TNGFTDVQKSRIKGSPLCDTFEHIIISEEVGFQKPARGIFDYAFSKLQITDKESVLIIGD 184 Query: 181 SLTSDIQGGINYGIDTCWFNPLGKEGAPGIHPTYEIRELSELLEIT 226 SLTSDIQGGINYGIDTCWFNP KE GI PTYEIR+L++++ I Sbjct: 185 SLTSDIQGGINYGIDTCWFNPYRKENNMGIKPTYEIRDLTDIIRIV 230 >C0ZEE2.1 C0ZEE2_BREBN Putative uncharacterized protein Length = 233 Score = 293 bits (749), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 141/227 (62%), Positives = 169/227 (74%) Query: 1 MKYEVILFDADDTLFDYRMAESRALYNAFAHFGLPTGAEDYAASYKEINAALWKDLEQGR 60 M+Y+VILFD DDTL D++ E+ AL F+ FGL TG+ +Y A+YKEI+ LW+DLE+GR Sbjct: 1 MRYQVILFDVDDTLLDFKKTEANALQKTFSQFGLATGSSEYGATYKEISKGLWEDLEKGR 60 Query: 61 TTSAVLRVERFNRLFAAHKLDLSPEAFSEAYLKFLGEGTFLIQGAVELCRELAGCRLAII 120 T A L VERF RLF A +LD+ EAF AYL+ LG+ L+ GAVELC L CRLAII Sbjct: 61 ITLAELGVERFRRLFKAAQLDVDAEAFGSAYLESLGKEVHLVPGAVELCNSLEDCRLAII 120 Query: 121 TNGIKDVQLSRIQGSPLSSTFEQIIISEEAGCQKPERGIFDYAFAKLGISDRSKVLIVGD 180 TNG VQ SRI SPL ++FE +IISEE G +KP+R IFDYAF+KL ++++ VL+VGD Sbjct: 121 TNGFASVQTSRIAASPLCNSFEHLIISEEVGYKKPDREIFDYAFSKLQWTEKANVLMVGD 180 Query: 181 SLTSDIQGGINYGIDTCWFNPLGKEGAPGIHPTYEIRELSELLEITR 227 SLTSDIQGG YGIDTCWFNP GKE I PTYEIRELSEL EI R Sbjct: 181 SLTSDIQGGAQYGIDTCWFNPQGKENQTSIQPTYEIRELSELQEIVR 227 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.139 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,313,779,236 Number of extensions: 51918347 Number of successful extensions: 113662 Number of sequences better than 1.0e-05: 1007 Number of HSP's gapped: 112718 Number of HSP's successfully gapped: 1007 Length of query: 227 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 96 Effective length of database: 1,826,543,238 Effective search space: 175348150848 Effective search space used: 175348150848 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)