BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0388.0001.p
         (111 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6LW23.1 A6LW23_CLOB8 L-asparaginase, type II EC=3.5.1.1              108   1e-22
C0CN38.1 C0CN38_9FIRM Putative uncharacterized protein                 85   2e-15
A7AZG5.1 A7AZG5_RUMGN Putative uncharacterized protein                 76   8e-13
B1BYM7.1 B1BYM7_9FIRM Putative uncharacterized protein                 73   7e-12
B0N6M4.1 B0N6M4_9FIRM Putative uncharacterized protein                 73   1e-11

>A6LW23.1 A6LW23_CLOB8 L-asparaginase, type II EC=3.5.1.1
          Length = 336

 Score =  108 bits (271), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 71/111 (63%)

Query: 1   VSVAYFHVDADPGILDYLATLSKXXXXXXXXXXXYSKPWIDKVGELKNNDIPVVRCSRIS 60
           VS+AYFH+DADP I+DY A  S+           +S  W++++  L+   IPVVR SRI 
Sbjct: 226 VSIAYFHIDADPSIIDYFAQNSEGIVIAGAGSGTFSSNWLEEIKNLETKGIPVVRSSRIG 285

Query: 61  SGITLKDSYIDLSANSIPCNSLVPQKARILLSLALTQTTGYEEIAAMFNEY 111
           +GI L DS ID  +N IP  +L P K+RILL+LALT+T  Y EI  +F EY
Sbjct: 286 NGIILTDSTIDKYSNCIPSYTLSPPKSRILLTLALTKTKDYSEIKRIFAEY 336


>C0CN38.1 C0CN38_9FIRM Putative uncharacterized protein
          Length = 324

 Score = 85.1 bits (209), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 2/111 (1%)

Query: 1   VSVAYFHVDADPGILDYLATLSKXXXXXXXXXXXYSKPWIDKVGELKNNDIPVVRCSRIS 60
           V +AYF  DADP IL++    ++           +SKPW +K+  +   +IPVVR SR+ 
Sbjct: 216 VEIAYFSADADPEILEFYGKTAEGLVIAGAGSGLFSKPWKEKIRGIAR-EIPVVRSSRVG 274

Query: 61  SGITLKDSYIDLSANSIPCNSLVPQKARILLSLALTQTTGYEEIAAMFNEY 111
           +G+  +D + D    +IP  +L P KARILL+LAL    G  EI  +F +Y
Sbjct: 275 NGMVSQD-HCDEELGTIPGGTLTPVKARILLTLALAMGAGQGEIGEIFKQY 324


>A7AZG5.1 A7AZG5_RUMGN Putative uncharacterized protein
          Length = 331

 Score = 76.3 bits (186), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 57/111 (51%)

Query: 1   VSVAYFHVDADPGILDYLATLSKXXXXXXXXXXXYSKPWIDKVGELKNNDIPVVRCSRIS 60
           V+V YF+  AD  ILDYLA   +           Y++ W+  + +L       VR SR+S
Sbjct: 221 VAVVYFYAGADEKILDYLAETHEGIVIVGSGSGNYNRKWMKTMEKLAEKGTVFVRASRVS 280

Query: 61  SGITLKDSYIDLSANSIPCNSLVPQKARILLSLALTQTTGYEEIAAMFNEY 111
            GI   D   D     I  N+L  QKAR+LL LALT T   ++I  +FN+Y
Sbjct: 281 QGIVFDDRVFDPMDVCIGANTLSGQKARVLLMLALTITKDVKQIRNIFNQY 331


>B1BYM7.1 B1BYM7_9FIRM Putative uncharacterized protein
          Length = 326

 Score = 73.2 bits (178), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 58/111 (52%)

Query: 1   VSVAYFHVDADPGILDYLATLSKXXXXXXXXXXXYSKPWIDKVGELKNNDIPVVRCSRIS 60
           V + Y++  A   IL  +A + +           YSK W+D++  L    I  VR SR++
Sbjct: 216 VGIVYYYAGAKVEILTLMAKIHQGIIIIGSGSGNYSKAWLDEIERLNKIGIIFVRASRVN 275

Query: 61  SGITLKDSYIDLSANSIPCNSLVPQKARILLSLALTQTTGYEEIAAMFNEY 111
            GI  +    D +   IP N+L  QKAR+LL LA+++T    EI  +F+EY
Sbjct: 276 QGIVYESEIFDPNNRCIPSNTLSGQKARVLLMLAMSKTKNVSEIKRIFDEY 326


>B0N6M4.1 B0N6M4_9FIRM Putative uncharacterized protein
          Length = 326

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 57/111 (51%)

Query: 1   VSVAYFHVDADPGILDYLATLSKXXXXXXXXXXXYSKPWIDKVGELKNNDIPVVRCSRIS 60
           V + Y++  A P IL  +A   +           YS+ W++++  L    I  VR SR++
Sbjct: 216 VGIVYYYAGAKPDILTMMAQNHRGIVIIGSGSGNYSQAWLNEIETLGAQGIIFVRASRVN 275

Query: 61  SGITLKDSYIDLSANSIPCNSLVPQKARILLSLALTQTTGYEEIAAMFNEY 111
            GI  +    D     IP N+L  QKAR+LL LAL+ T   +EI  +FNEY
Sbjct: 276 QGIVYESDVFDPHNVCIPSNTLSGQKARVLLMLALSVTQNTKEIKRIFNEY 326


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.134    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 555,729,140
Number of extensions: 17134186
Number of successful extensions: 28633
Number of sequences better than 1.0e-05: 103
Number of HSP's gapped: 28630
Number of HSP's successfully gapped: 103
Length of query: 111
Length of database: 3,060,696,203
Length adjustment: 78
Effective length of query: 33
Effective length of database: 2,325,857,033
Effective search space: 76753282089
Effective search space used: 76753282089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)