BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0386.0035.p (219 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z5Y3.1 C0Z5Y3_BREBN Putative uncharacterized protein 182 2e-44 B3KIW9.1 B3KIW9_9BACI DSBA oxidoreductase 176 9e-43 C5D3X8.1 C5D3X8_9BACI DSBA oxidoreductase 171 3e-41 C1I9F6.1 C1I9F6_9CLOT DSBA oxidoreductase 162 2e-38 C4L3X3.1 C4L3X3_EXISA DSBA oxidoreductase 158 4e-37 >C0Z5Y3.1 C0Z5Y3_BREBN Putative uncharacterized protein Length = 241 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 97/224 (43%), Positives = 132/224 (58%), Gaps = 10/224 (4%) Query: 2 IGKRKFENALGMFTMKDKVDVVYRSYQLDPNAENRTLSN--EQLAQEKGMNVEQLKAKQA 59 IGKR+ E AL F KD+V+VVYRS+QLDP E T + E LA + + +EQ K Sbjct: 16 IGKRRLEGALSQFPHKDQVEVVYRSFQLDPQMERDTDMDMHEVLAAKYSIPLEQAKGMND 75 Query: 60 HVANMIKKEAGFDVSYDQVVIANTFDGHRLVHFADKAGKGAELTERLFRAYLSQRMNIAD 119 V M K G D +D ++ NTFD HRL HFA GK E+ ER+ +AY ++ +++ D Sbjct: 76 QVTQMAKG-VGLDYHFDTMIPTNTFDAHRLTHFAHAHGKMKEMKERMLKAYFTESLHLGD 134 Query: 120 HNVLVALGSEAGLNEQYVAEMLKSDAYKDSVKADIAEARNLNISSLPTFVFNNKYVISGA 179 H VL L SE GL+++ ML D Y++ V+ D +L ++ +P FV NNKY +SGA Sbjct: 135 HEVLAQLASEVGLDKEATLAMLAGDEYREQVQEDKQRGNDLGVTGVPFFVINNKYAVSGA 194 Query: 180 QSEEVFLNALNSIWEKE------KVLQELEKTEQSSGEDGCEVG 217 Q EVFL ALN +WE+E K +Q EK ++ SG D C G Sbjct: 195 QPGEVFLGALNQVWEEESATPALKFVQNDEKKDEQSG-DNCADG 237 >B3KIW9.1 B3KIW9_9BACI DSBA oxidoreductase Length = 239 Score = 176 bits (447), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 137/213 (64%), Gaps = 7/213 (3%) Query: 2 IGKRKFENALGMFTMKDKVDVVYRSYQLDPNAE--NRTLSNEQLAQEKGMNVEQLKAKQA 59 IGKR+FE+AL F KD+V+VVYRS++LDPNA +E LA + GM++EQ KA A Sbjct: 16 IGKRRFESALEQFPHKDQVEVVYRSFELDPNASYMPGVSMDELLAAKYGMSIEQAKAANA 75 Query: 60 HVANMIKKEAGFDVSY--DQVVIANTFDGHRLVHFADKAGKGAELTERLFRAYLSQRMNI 117 N+ ++ AG ++Y D+V+ AN+FD HRLVHFA + GK ++TERLFRAY + N+ Sbjct: 76 ---NVTQQAAGVGLTYHMDRVIPANSFDAHRLVHFAAQHGKMKDMTERLFRAYFTDAENL 132 Query: 118 ADHNVLVALGSEAGLNEQYVAEMLKSDAYKDSVKADIAEARNLNISSLPTFVFNNKYVIS 177 D N+L L +E GL + +L+SDA++ V+AD A A NL I +P FV KY +S Sbjct: 133 EDKNLLADLAAEVGLEREQAMAVLESDAFQSEVRADEAAATNLGIRGVPFFVLGGKYAVS 192 Query: 178 GAQSEEVFLNALNSIWEKEKVLQELEKTEQSSG 210 GAQ EVF +AL+ + + L + +++ + G Sbjct: 193 GAQPLEVFTDALDKAYREANPLVMVNESDSNDG 225 >C5D3X8.1 C5D3X8_9BACI DSBA oxidoreductase Length = 236 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 3/211 (1%) Query: 2 IGKRKFENALGMFTMKDKVDVVYRSYQLDPNAENR--TLSNEQLAQEKGMNVEQLKAKQA 59 IGKR+ E AL F KD+V+VV+RS++LDPNA+ +E +AQ+ G++VE+ K A Sbjct: 16 IGKRRLEKALEQFPHKDEVEVVFRSFELDPNAKKHYDMTIHEIIAQKYGISVEEAKRVNA 75 Query: 60 HVANMIKKEAGFDVSYDQVVIANTFDGHRLVHFADKAGKGAELTERLFRAYLSQRMNIAD 119 + + G +D + NTFD HRL +A++ GK E+ ERLF+AY + I+D Sbjct: 76 DIGRQAES-VGLTFRFDTMKPTNTFDAHRLAKYAEEQGKLREMVERLFQAYFTDSKLISD 134 Query: 120 HNVLVALGSEAGLNEQYVAEMLKSDAYKDSVKADIAEARNLNISSLPTFVFNNKYVISGA 179 H+VL+ L EAGL+ V ++L+SD Y D V+ D AEA + +P FV N KY ISGA Sbjct: 135 HDVLIELAGEAGLDRDKVKQVLESDRYTDEVRKDEAEAARFGVRGVPFFVLNRKYAISGA 194 Query: 180 QSEEVFLNALNSIWEKEKVLQELEKTEQSSG 210 Q EVF+ AL +WE+E L+ +G Sbjct: 195 QPTEVFMQALEKVWEEENANSPLQPLAMEAG 225 >C1I9F6.1 C1I9F6_9CLOT DSBA oxidoreductase Length = 215 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 126/200 (63%), Gaps = 3/200 (1%) Query: 2 IGKRKFENALGMFTMKDKVDVVYRSYQLDPNAENRTLSN--EQLAQEKGMNVEQLKAKQA 59 IGKRKFE AL F K+ ++++YRS++L+P+AE N E +A + G+ E+ K Sbjct: 16 IGKRKFEVALEKFDKKEDIEIIYRSFELNPSAEKHNDKNIHELIANKYGITYEEAKLNND 75 Query: 60 HVANMIKKEAGFDVSYDQVVIANTFDGHRLVHFADKAGKGAELTERLFRAYLSQRMNIAD 119 ++ N KE G + ++D +V N+FD HR++HFA + GK E+TE LF+AY + N++D Sbjct: 76 NIVNQ-AKELGLEYNFDTLVPTNSFDAHRMIHFAKEYGKMEEMTETLFKAYFTDSKNVSD 134 Query: 120 HNVLVALGSEAGLNEQYVAEMLKSDAYKDSVKADIAEARNLNISSLPTFVFNNKYVISGA 179 N LV + GLN++ +L S+ Y D V+AD A I+++P F+FN K+ +SGA Sbjct: 135 FNTLVEIAENVGLNKEEAINVLNSNKYSDLVRADEELAGRYGINAVPFFIFNEKFTVSGA 194 Query: 180 QSEEVFLNALNSIWEKEKVL 199 Q E+FL ALN + E+EK L Sbjct: 195 QPIELFLRALNKVSEEEKSL 214 >C4L3X3.1 C4L3X3_EXISA DSBA oxidoreductase Length = 231 Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 126/218 (57%), Gaps = 5/218 (2%) Query: 2 IGKRKFENALGMFTMKDKVDVVYRSYQLDPNA---ENRTLSNEQLAQEKGMNVEQLKAKQ 58 IGKR+ E AL F D+V+V ++S++LDPNA ++RT+ E LA + GM +EQ K Sbjct: 16 IGKRRLEEALEQFPQADQVEVEFKSFELDPNAPTDDSRTIY-EALATKYGMPIEQAKGTT 74 Query: 59 AHVANMIKKEAGFDVSYDQVVIANTFDGHRLVHFADKAGKGAELTERLFRAYLSQRMNIA 118 A VA +E G D ++ +V+ T D HRL H+A GK EL+E L +AY +I Sbjct: 75 AQVAAQ-AREVGLDYDFENMVVTGTLDSHRLTHYAKTVGKEKELSEALLQAYFVDAKHIG 133 Query: 119 DHNVLVALGSEAGLNEQYVAEMLKSDAYKDSVKADIAEARNLNISSLPTFVFNNKYVISG 178 +H+VL+ + + GL+ V ++L +D Y + V+ + A +L I+ +P FVF+NKY +SG Sbjct: 134 NHDVLLEIATSVGLDSDAVRDVLTTDMYTEDVRVEEKRASDLGITGVPFFVFDNKYGVSG 193 Query: 179 AQSEEVFLNALNSIWEKEKVLQELEKTEQSSGEDGCEV 216 AQ E F L +W + ++ + +D C++ Sbjct: 194 AQPTEAFTQVLEKVWSENNPTIQVLSNGATCTDDNCDI 231 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.129 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,178,087,615 Number of extensions: 44982908 Number of successful extensions: 118258 Number of sequences better than 1.0e-05: 561 Number of HSP's gapped: 117839 Number of HSP's successfully gapped: 561 Length of query: 219 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 89 Effective length of database: 1,835,964,253 Effective search space: 163400818517 Effective search space used: 163400818517 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 128 (53.9 bits)