BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0386.0015.p (397 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KK75.1 B3KK75_9BACI YqxK 474 e-132 A1HTQ5.1 A1HTQ5_9FIRM Putative uncharacterized protein 349 3e-94 C0ZC45.1 C0ZC45_BREBN Putative uncharacterized protein yqxK 341 7e-92 Q2B6A8.1 Q2B6A8_9BACI Putative uncharacterized protein 334 8e-90 Q65HS8.1 Q65HS8_BACLD YqxK 332 3e-89 >B3KK75.1 B3KK75_9BACI YqxK Length = 404 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 224/348 (64%), Positives = 266/348 (76%), Gaps = 2/348 (0%) Query: 6 KLRSYYCDLHVHIGRTSAGQAVKISGSSSLTFAGIAKEAAQRKGMELIGIIDSHAPGVLA 65 KL+SYYCD+H+HIGRTS+GQAVKIS S++LTF IA EA++RKG+++IGIID H+P V Sbjct: 12 KLQSYYCDMHIHIGRTSSGQAVKISASNNLTFENIAVEASERKGIQMIGIIDCHSPSVQE 71 Query: 66 DIRALLXXXXXXXXXXXXIAYQGTTIVLGTEIEIREPGRKECHVLAFLPDLAAMEDFSSW 125 DI L IAY+ T I+LG+EIEIRE GR HVLA+ PDL M++F+ W Sbjct: 72 DILQCLDSGVMQEIDGGGIAYRDTVILLGSEIEIRESGRGAAHVLAYFPDLGTMQEFTGW 131 Query: 126 MGKHMRNINLSSQRLYVPARDLQDEICGRGGILIPAHIFTPHKGLYGCTAERMAELFDLE 185 M +M+N+ LSSQR+YV +LQ EI RGG+LIPAH+FTPHKGLYG A+RM+E+FDL Sbjct: 132 MAGYMKNVQLSSQRIYVSPLELQQEITARGGLLIPAHVFTPHKGLYGSMADRMSEVFDLN 191 Query: 186 RIAAVELGLSADSEMAGYISELDPFTFLTNSDAHSLGKIGREYNVIEMEKPSFNELKLAL 245 IA +ELGLSADS MAG ISELD ++FLTNSDAHSLGKIGREYN I+M KPSF E + AL Sbjct: 192 GIAGIELGLSADSSMAGRISELDAYSFLTNSDAHSLGKIGREYNRIDMAKPSFAEFRQAL 251 Query: 246 ARQEGRRVSGNFGLNPRLGKYHRTYCAGCGSIVDEAYATSE--RCPYCGSQKLVQGVFDR 303 RR+S N+GLNPRLGKYHRTYC GC SI+DE + RCPYCGS KLVQGVFDR Sbjct: 252 QASNRRRISANYGLNPRLGKYHRTYCVGCDSILDEGSDVHDLVRCPYCGSTKLVQGVFDR 311 Query: 304 ILVIADREQPLIPAHRPPYHYQVPLEFIPGLGKRKLEALLAAFGTEMR 351 IL IADR +P++P RP YHYQVPLEFIPGLGK + LL AFGTEM Sbjct: 312 ILNIADRTEPVVPESRPAYHYQVPLEFIPGLGKSSMSKLLDAFGTEMN 359 >A1HTQ5.1 A1HTQ5_9FIRM Putative uncharacterized protein Length = 395 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 236/349 (67%), Gaps = 4/349 (1%) Query: 7 LRSYYCDLHVHIGRTSAGQAVKISGSSSLTFAGIAKEAAQRKGMELIGIIDSHAPGVLAD 66 +R Y+ DLH+H+GR AG+ VKI S +LT I +EA+ RKGM+++G++D+ +P VL+D Sbjct: 1 MREYFADLHIHVGRNEAGKWVKIPTSKNLTVRNILEEASTRKGMDIVGLVDALSPLVLSD 60 Query: 67 IRALLXXXXXXXXXXXXIAYQGTTIVLGTEIEIREPGRKECHVLAFLPDLAAMEDFSSWM 126 + L+ Y+ T++LG EIE E H L +LPD AAM+ FS M Sbjct: 61 LERLIAEGLLTPLGGGGYRYRDLTVLLGAEIETAEAEGGLAHTLIYLPDFAAMKRFSEVM 120 Query: 127 GKHMRNINLSSQRLYVPARDLQDEICGRGGILIPAHIFTPHKGLYGCTAERMAELFD--- 183 +++RNI++SSQ ++P L + ++IPAH+FTP+K LYG A+R++ L Sbjct: 121 SRYIRNIHISSQNAHMPLARLVEIAASFEAVIIPAHVFTPYKSLYGSCADRLSHLLPERL 180 Query: 184 LERIAAVELGLSADSEMAGYISELDPFTFLTNSDAHSLGKIGREYNVIEMEKPSFNELKL 243 + +I+A+ELGLSAD+ MA I EL PFTF+TNSDAHSL KI REYNV+ +E P++ E L Sbjct: 181 MAKISAIELGLSADTFMADRIDELAPFTFVTNSDAHSLVKIAREYNVLRLEAPTWQECLL 240 Query: 244 ALARQEGRRVSGNFGLNPRLGKYHRTYCAGCGSI-VDEAYATSERCPYCGSQKLVQGVFD 302 A+AR++GR V+GN+GLNP LGKYHR+ C+ CG + + CP+CGS K+++GVFD Sbjct: 241 AIARRDGRAVTGNYGLNPLLGKYHRSLCSACGYLDLAGEIPVHGACPHCGSIKIIKGVFD 300 Query: 303 RILVIADREQPLIPAHRPPYHYQVPLEFIPGLGKRKLEALLAAFGTEMR 351 RI IA P P HRPPYHYQ+PLEF+PGLG++ LE LL FG+EMR Sbjct: 301 RIEEIAAYPVPQHPVHRPPYHYQIPLEFVPGLGRKLLEKLLDRFGSEMR 349 >C0ZC45.1 C0ZC45_BREBN Putative uncharacterized protein yqxK Length = 390 Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 169/345 (48%), Positives = 229/345 (66%), Gaps = 2/345 (0%) Query: 7 LRSYYCDLHVHIGRTSAGQAVKISGSSSLTFAGIAKEAAQRKGMELIGIIDSHAPGVLAD 66 L SY+CD+H+HIG T G+ VKI+ S +T I +EA+ +KGM++IGIID+H+P V + Sbjct: 2 LTSYFCDMHIHIGGTWTGKPVKITASRQMTLTKILEEASDKKGMDVIGIIDAHSPEVQDE 61 Query: 67 IRALLXXXXXXXXXXXXIAYQGTTIVLGTEIEIREPGRKECHVLAFLPDLAAMEDFSSWM 126 + LL I+Y+ T ++LG E+EI+EPGR H L +LP L M+ F++W+ Sbjct: 62 LVDLLEKGLATEQADGGISYKDTLLILGCEVEIKEPGRGAAHFLVYLPKLQEMKQFTAWL 121 Query: 127 GKHMRNINLSSQRLYVPARDLQDEICGRGGILIPAHIFTPHKGLYGCTAERMAELFDLER 186 + +N+ LSSQR+Y R+LQ + G++IPAHIFTPHKG+YG + MAE+ D Sbjct: 122 SERCKNVQLSSQRIYTSLRELQACVHQLQGLMIPAHIFTPHKGMYGSCTDAMAEVLDPSL 181 Query: 187 IAAVELGLSADSEMAGYISELDPFTFLTNSDAHSLGKIGREYNVIEMEKPSFNELKLALA 246 + AVELGLSA++ MA ISEL TFLTNSDAHSL KIGREY + M++ SF E A+ Sbjct: 182 VYAVELGLSANTTMADRISELHDKTFLTNSDAHSLAKIGREYQAMHMQERSFAEWVKAIK 241 Query: 247 RQEGRRVSGNFGLNPRLGKYHRTYCAGCGSIVDEAYATSERCPYCGSQKLVQGVFDRILV 306 R GR V N+GL+P LGKYH+T C GC S++ A S +CP CG Q++V+GV RI Sbjct: 242 RIGGRGVHVNYGLHPELGKYHQTACQGCQSLL--AADASGKCPECGFQRIVRGVAARIDQ 299 Query: 307 IADREQPLIPAHRPPYHYQVPLEFIPGLGKRKLEALLAAFGTEMR 351 +AD E P RPPY Q+PLEFIPG+G + L+ L +FGT+M Sbjct: 300 LADVEAGQHPTFRPPYIEQIPLEFIPGVGPKLLDKLYRSFGTQMN 344 >Q2B6A8.1 Q2B6A8_9BACI Putative uncharacterized protein Length = 390 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 170/346 (49%), Positives = 231/346 (66%), Gaps = 7/346 (2%) Query: 7 LRSYYCDLHVHIGRTSAGQAVKISGSSSLTFAGIAKEAAQRKGMELIGIIDSHAPGVLAD 66 L++YY D+H+HIGRT +G+AVKI+G+ SL F+ I + A KG+++IGIID H+P V+ + Sbjct: 3 LQTYYADMHIHIGRTKSGRAVKITGARSLVFSNIIEHARDSKGLDMIGIIDCHSPEVIDE 62 Query: 67 IRALLXXXXXXXXXXXXIAYQGTTIVLGTEIEI-REPGRKECHVLAFLPDLAAMEDFSSW 125 + L+ + Y G I+ G+E+EI E + HVL + P+L M++FS W Sbjct: 63 MEELMATGELVQSPEGGLLYGGLAIIPGSELEIYDESCKGPIHVLCYFPNLDVMKEFSLW 122 Query: 126 MGKHMRNINLSSQRLYVPARDLQDEICGRGGILIPAHIFTPHKGLYGCTAER-MAELFDL 184 + ++NI+LSSQR+Y ++LQ ++ GG+ IPAH+FTP K +YG +R + E+FD Sbjct: 123 LKGRLKNIHLSSQRIYASGKELQSQVKAFGGLFIPAHVFTPFKSMYGKGVDRSLEEVFDK 182 Query: 185 ERIAAVELGLSADSEMAGYISELDPFTFLTNSDAHSLGKIGREYNVIEMEKPSFNELKLA 244 + I +ELGLS+D+EMA I EL + FLTNSDAHSLGKI REY IEM PSFNE LA Sbjct: 183 DLIDGIELGLSSDTEMADMIHELHQYPFLTNSDAHSLGKIAREYQQIEMAGPSFNEFHLA 242 Query: 245 LARQEGRRVSGNFGLNPRLGKYHRTYCAGCGSIVDEAYATSERCPYCGSQKLVQGVFDRI 304 L R+ GRR+S N+GL+P+LGKYH+T C C S + + C CGS K V+GV DRI Sbjct: 243 LKREGGRRISANYGLDPQLGKYHQTVCLDCHSPLASGHNG---CRKCGSIKQVKGVADRI 299 Query: 305 LVIADREQPLIPAHRPPYHYQVPLEFIPGLGKRKLEALLAAFGTEM 350 + + + PA RPPY +QVPLEFIPGLG + LE LL FGTEM Sbjct: 300 MEL--KTAGSAPADRPPYVHQVPLEFIPGLGPKILERLLDHFGTEM 343 >Q65HS8.1 Q65HS8_BACLD YqxK Length = 387 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 165/347 (47%), Positives = 232/347 (66%), Gaps = 7/347 (2%) Query: 7 LRSYYCDLHVHIGRTSAGQAVKISGSSSLTFAGIAKEAAQRKGMELIGIIDSHAPGVLAD 66 ++ + D+H+HIGRT +G+ VKI+ + +LT I EA++ KGMELIGIID H+P VLA+ Sbjct: 1 MKEIFADMHIHIGRTESGRPVKITAARTLTLDEILIEASEHKGMELIGIIDCHSPEVLAE 60 Query: 67 IRALLXXXXXXXXXXXXIAYQGTTIVLGTEIEIREPG-RKECHVLAFLPDLAAMEDFSSW 125 I + I Y+ T ++ G+E+EI + R HVLAF+P ++AM+ FS W Sbjct: 61 IEKGVSSGRYTELEDGGIKYKDTVLLCGSELEINDDRCRGPIHVLAFMPSISAMKQFSGW 120 Query: 126 MGKHMRNINLSSQRLYVPARDLQDEICGRGGILIPAHIFTPHKGLYGCTAE-RMAELFDL 184 + + + NI+LSSQR+Y LQ ++ GG+ IPAHIFTPHK LYG E + E+FD Sbjct: 121 LSERVTNIHLSSQRIYETGIGLQRKVKELGGLFIPAHIFTPHKSLYGKGVEFSLKEVFDP 180 Query: 185 ERIAAVELGLSADSEMAGYISELDPFTFLTNSDAHSLGKIGREYNVIEMEKPSFNELKLA 244 I AVELGLS+D++MA ++SEL+P+ FLTNSDAHSLGKIGREYN + ++ SF E LA Sbjct: 181 RMIDAVELGLSSDTDMASHVSELNPYAFLTNSDAHSLGKIGREYNKLHIKHASFQEFSLA 240 Query: 245 LARQEGRRVSGNFGLNPRLGKYHRTYCAGCGSIVDEAYATSERCPYCGSQKLVQGVFDRI 304 L QEGR ++ N+G+NP+LGKY +T C CG + + A C CGS+K +GV R+ Sbjct: 241 LKGQEGRSIAANYGMNPQLGKYFQTACETCGRLQE---ADETLCKACGSRKFTKGVSTRL 297 Query: 305 LVIADREQPLIPAHRPPYHYQVPLEFIPGLGKRKLEALLAAFGTEMR 351 + + D+++ P RPPY +QVPL+ IPG+G + ++ L AFGTEM Sbjct: 298 MELYDQDES--PVKRPPYVHQVPLQLIPGIGPKTIQKLKEAFGTEMN 342 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,977,279,279 Number of extensions: 79070241 Number of successful extensions: 163613 Number of sequences better than 1.0e-05: 128 Number of HSP's gapped: 163223 Number of HSP's successfully gapped: 128 Length of query: 397 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 259 Effective length of database: 1,760,596,133 Effective search space: 455994398447 Effective search space used: 455994398447 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)