BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0386.0001.p
         (101 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KK64.1 B3KK64_9BACI Putative uncharacterized protein                106   6e-22
B1DJE0.1 B1DJE0_9BACL Putative uncharacterized protein                 73   1e-11

>B3KK64.1 B3KK64_9BACI Putative uncharacterized protein
          Length = 101

 Score =  106 bits (265), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 1/101 (0%)

Query: 1   MKLLTTRFIAILILVVPGLLAMKGFLMMKDDIFNYISMHGDE-TATPVFAWXXXXXXXXX 59
           MK+L +RFIAILILV+PG +AMKGFLMMKD +F YI++HGD+  A P F W         
Sbjct: 1   MKMLISRFIAILILVIPGFMAMKGFLMMKDAVFLYIAVHGDDNVANPAFGWLSFLGGLAL 60

Query: 60  XXXXXXXXXXWILTRDRKRNYVGPRFREKQKTQQPPSPDAT 100
                     WIL RDRKRNYVGPRF++K+   +  +P  +
Sbjct: 61  FVIGIGFLGGWILFRDRKRNYVGPRFKKKRPAPKSGTPSKS 101


>B1DJE0.1 B1DJE0_9BACL Putative uncharacterized protein
          Length = 97

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 45/81 (55%)

Query: 1  MKLLTTRFIAILILVVPGLLAMKGFLMMKDDIFNYISMHGDETATPVFAWXXXXXXXXXX 60
          M+L+  R +A+L+LV+PG+ A  GFL MK+ IFNY S  G++   P FAW          
Sbjct: 1  MRLVAARLVAVLLLVIPGIAACIGFLKMKNAIFNYFSDFGNDAIKPDFAWLSFLFGLVLF 60

Query: 61 XXXXXXXXXWILTRDRKRNYV 81
                   WI  RDRKRNYV
Sbjct: 61 AIGVGFIGGWIFFRDRKRNYV 81


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.326    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 452,741,023
Number of extensions: 11115693
Number of successful extensions: 32597
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 32621
Number of HSP's successfully gapped: 2
Length of query: 101
Length of database: 3,060,696,203
Length adjustment: 69
Effective length of query: 32
Effective length of database: 2,410,646,168
Effective search space: 77140677376
Effective search space used: 77140677376
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 126 (53.1 bits)