BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0385.0022.p (176 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFB4.1 B3KFB4_9BACI Erythromycin esterase 338 1e-91 B3ZHM2.1 B3ZHM2_BACCE Putative uncharacterized protein 318 1e-85 C3H2W8.1 C3H2W8_BACTU Erythromycin esterase 310 4e-83 C2YTI5.1 C2YTI5_BACCE Erythromycin esterase 310 4e-83 C2UUX0.1 C2UUX0_BACCE Erythromycin esterase 308 1e-82 >B3KFB4.1 B3KFB4_9BACI Erythromycin esterase Length = 446 Score = 338 bits (868), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 154/176 (87%), Positives = 170/176 (96%) Query: 1 MVAAYPDNLKDFYLKHDIAMYENAKWTEEHVGKTIVWGHNGHVSKTNMIPFVYPKVAGQY 60 M AAYPDNL DFYLKHDIAMYENAKWTEEH+GKTIVWGHNGHVSKTN+IPFVYPKVAGQ+ Sbjct: 271 MTAAYPDNLGDFYLKHDIAMYENAKWTEEHIGKTIVWGHNGHVSKTNLIPFVYPKVAGQH 330 Query: 61 LAEHYGKRYVSIGTSVYEGRYNVYNSKQEFGPFGTLKLDDPSSFNYSFGQVHYDQFFVDL 120 LAEHYGKRYV+IGTSV+EGRYNVYN+ Q+FGP+G LKLDDP+SFN++FGQV YDQFFVDL Sbjct: 331 LAEHYGKRYVTIGTSVFEGRYNVYNTSQQFGPYGILKLDDPNSFNHTFGQVKYDQFFVDL 390 Query: 121 RKASGVTKTWLNEQHPIFAGITTVGPDIPTTIDLSLGKTFDIIVQIQKVNPSQLNR 176 RKASGVTKTWLNEQHPIFAG+TTVGPDIPTT+++SLGKTFDIIVQIQKV PSQLN+ Sbjct: 391 RKASGVTKTWLNEQHPIFAGVTTVGPDIPTTVEVSLGKTFDIIVQIQKVKPSQLNQ 446 >B3ZHM2.1 B3ZHM2_BACCE Putative uncharacterized protein Length = 443 Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 146/176 (82%), Positives = 165/176 (93%) Query: 1 MVAAYPDNLKDFYLKHDIAMYENAKWTEEHVGKTIVWGHNGHVSKTNMIPFVYPKVAGQY 60 M+A+YPD DFYLKHDIAMYENAKWTEEH+GKTIVWGHNGHVSKTNMIPF+YPKVAGQ+ Sbjct: 268 MLASYPDKPSDFYLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMIPFIYPKVAGQH 327 Query: 61 LAEHYGKRYVSIGTSVYEGRYNVYNSKQEFGPFGTLKLDDPSSFNYSFGQVHYDQFFVDL 120 LAE+YGKRYVSIGTSVYEG+YNVYNS EFGP+GTLK DDP+S+NY FGQV DQFF+DL Sbjct: 328 LAEYYGKRYVSIGTSVYEGQYNVYNSNGEFGPYGTLKSDDPNSYNYIFGQVKKDQFFIDL 387 Query: 121 RKASGVTKTWLNEQHPIFAGITTVGPDIPTTIDLSLGKTFDIIVQIQKVNPSQLNR 176 RKA+GVTKTWLNEQHPIFAGITT GPDIP T+D+SLGK+FDI+VQIQKV+PSQL++ Sbjct: 388 RKANGVTKTWLNEQHPIFAGITTEGPDIPKTVDISLGKSFDILVQIQKVSPSQLHQ 443 >C3H2W8.1 C3H2W8_BACTU Erythromycin esterase Length = 443 Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 143/176 (81%), Positives = 161/176 (91%) Query: 1 MVAAYPDNLKDFYLKHDIAMYENAKWTEEHVGKTIVWGHNGHVSKTNMIPFVYPKVAGQY 60 M+A PD DFYLKHDIAMYENAKWTEEH+GKTIVWGHNGHVSKTNM+PF+YPKVAGQ+ Sbjct: 268 MLATPPDKPADFYLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMLPFIYPKVAGQH 327 Query: 61 LAEHYGKRYVSIGTSVYEGRYNVYNSKQEFGPFGTLKLDDPSSFNYSFGQVHYDQFFVDL 120 L E+YGKRYVSIGTSVYEG+YNV NS EFGP+GTLK DDP+S+NY FGQV DQFF+DL Sbjct: 328 LTEYYGKRYVSIGTSVYEGQYNVKNSNGEFGPYGTLKSDDPNSYNYIFGQVKKDQFFIDL 387 Query: 121 RKASGVTKTWLNEQHPIFAGITTVGPDIPTTIDLSLGKTFDIIVQIQKVNPSQLNR 176 RKA+GVTKTWLNEQHPIFAGITT GPDIP T+D+SLGKTFDI+VQIQKV+PSQL++ Sbjct: 388 RKANGVTKTWLNEQHPIFAGITTEGPDIPKTVDISLGKTFDILVQIQKVSPSQLHQ 443 >C2YTI5.1 C2YTI5_BACCE Erythromycin esterase Length = 443 Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 142/176 (80%), Positives = 162/176 (92%) Query: 1 MVAAYPDNLKDFYLKHDIAMYENAKWTEEHVGKTIVWGHNGHVSKTNMIPFVYPKVAGQY 60 M+A+ PD D +LKHDIAMYENAKWTEEH+GKTIVWGHNGHVSKTNMIPF+YPKVAGQ+ Sbjct: 268 MLASPPDKPSDIFLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMIPFIYPKVAGQH 327 Query: 61 LAEHYGKRYVSIGTSVYEGRYNVYNSKQEFGPFGTLKLDDPSSFNYSFGQVHYDQFFVDL 120 LAE+YGKRYVSIGTSVYEG+YNVYNS EFGP+GTLK DDP S+NY+FGQV DQFF+DL Sbjct: 328 LAEYYGKRYVSIGTSVYEGQYNVYNSDGEFGPYGTLKSDDPKSYNYTFGQVKKDQFFIDL 387 Query: 121 RKASGVTKTWLNEQHPIFAGITTVGPDIPTTIDLSLGKTFDIIVQIQKVNPSQLNR 176 RKA+GVTKTWLNEQHPIFAGITT GP IP T+D+SLGK+FDI+VQIQKV+PSQL++ Sbjct: 388 RKANGVTKTWLNEQHPIFAGITTEGPTIPKTVDISLGKSFDILVQIQKVSPSQLHQ 443 >C2UUX0.1 C2UUX0_BACCE Erythromycin esterase Length = 443 Score = 308 bits (790), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 142/176 (80%), Positives = 161/176 (91%) Query: 1 MVAAYPDNLKDFYLKHDIAMYENAKWTEEHVGKTIVWGHNGHVSKTNMIPFVYPKVAGQY 60 M+A+ PD DFYLKHDIAMYENAKWTEEH+GKTIVWGHNGHVSKTNM+PF+YPKVAGQ+ Sbjct: 268 MLASPPDKPSDFYLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMLPFIYPKVAGQH 327 Query: 61 LAEHYGKRYVSIGTSVYEGRYNVYNSKQEFGPFGTLKLDDPSSFNYSFGQVHYDQFFVDL 120 LAE+YGKRYVSIGTSVYEG+YNV NS EFGP+G LK DDP+S+NY FGQV DQFF+DL Sbjct: 328 LAEYYGKRYVSIGTSVYEGQYNVKNSDGEFGPYGILKSDDPNSYNYIFGQVKKDQFFIDL 387 Query: 121 RKASGVTKTWLNEQHPIFAGITTVGPDIPTTIDLSLGKTFDIIVQIQKVNPSQLNR 176 RKA+GVTKTWLNEQHPIFAGITT GPDIP T+D+SLGK FDI+VQIQKV+PSQL++ Sbjct: 388 RKANGVTKTWLNEQHPIFAGITTEGPDIPKTVDISLGKAFDILVQIQKVSPSQLHQ 443 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,160,025,531 Number of extensions: 48814099 Number of successful extensions: 92837 Number of sequences better than 1.0e-05: 103 Number of HSP's gapped: 92808 Number of HSP's successfully gapped: 103 Length of query: 176 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 50 Effective length of database: 1,873,648,313 Effective search space: 93682415650 Effective search space used: 93682415650 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)