BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0385.0015.p (465 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5P2.1 B3K5P2_9BACI Extracellular solute-binding protein family 1 704 0.0 B3KEQ6.1 B3KEQ6_9BACI Extracellular solute-binding protein family 1 525 e-147 B1D7Q4.1 B1D7Q4_9BACL Extracellular solute-binding protein family 1 511 e-143 A9KI47.1 A9KI47_CLOPH Extracellular solute-binding protein family 1 274 1e-71 A8S1I5.1 A8S1I5_9CLOT Putative uncharacterized protein 112 9e-23 >B3K5P2.1 B3K5P2_9BACI Extracellular solute-binding protein family 1 Length = 456 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/465 (72%), Positives = 393/465 (84%), Gaps = 11/465 (2%) Query: 1 MKKQLLLTSLSAVLAFGLAACGNSNTAENSGEASNAGKTSDAGAASGEKTKITYWTGDRH 60 + K+ ++++ +L+ LAACG+S + + EA S +KTKITYWTGDRH Sbjct: 3 ISKRFFMSAICLMLSGSLAACGSSTSTDQGAEA-----------GSNDKTKITYWTGDRH 51 Query: 61 DAEFVKEKVAEFNKTNTDGIEVELVVKGDDFDTALDLSFQTSDSPDVIRVKENTIGTFYK 120 D+EFVKE + FNKTN D IEVELV+KGDDFD ALD+SFQTS+ PD+IRVKENTI TFYK Sbjct: 52 DSEFVKETIDTFNKTNKDNIEVELVIKGDDFDQALDMSFQTSEPPDIIRVKENTIQTFYK 111 Query: 121 KEYLAPIDEYLSDDMKAKFPEMTDLNIFDGKRYSLPNYGTTMRLIYNKDLFAKAGVTNPP 180 K +LAPIDE+L+D+MK KFP M DLN F+GKRYSLPNYGTTMRLIYNK+LFAKAG+ PP Sbjct: 112 KGFLAPIDEFLTDEMKEKFPLMEDLNSFEGKRYSLPNYGTTMRLIYNKELFAKAGIEQPP 171 Query: 181 TTLQELVDTAKKLTAAGKADGAYGFAQNFKSPASAFGRSARVIAEMSGFGGFGYDFKTAR 240 TTL ELV+TAKK+T AGKA GAYGFAQNFK+P+SA GRSARVIAE+SGFGGFGYDFKTAR Sbjct: 172 TTLDELVETAKKITEAGKASGAYGFAQNFKNPSSALGRSARVIAEVSGFGGFGYDFKTAR 231 Query: 241 FDFSGFKPIIEAFKQIRDDGSMLPGVESLDIDPLRAQFAEGKIGMYLSYSSEPGVYSTQF 300 +DFSGFKPI+EAFKQI+DDGSMLPGVESLDIDPLRAQFAEGKIGMYLS+S+E GVY +QF Sbjct: 232 YDFSGFKPIMEAFKQIKDDGSMLPGVESLDIDPLRAQFAEGKIGMYLSFSAEAGVYQSQF 291 Query: 301 PAKIDWAAAPAPTIDGKVKGASGFLGGQWLALSSKSKHKDAAWKFMEYMYSDQMLTTYQE 360 PAKI+WAAAP P+IDG+ GASGFLGGQWLA+SS+S+HK+AAWKF+ YMY + +L YQE Sbjct: 292 PAKIEWAAAPVPSIDGQFNGASGFLGGQWLAISSESEHKEAAWKFLTYMYDESILQQYQE 351 Query: 361 KGFGISMVPSISAAAKTPEVNGIEGFLPNQYDGVWPVYPSVAPEGMKSDDAFFKYMLNGG 420 KGFGISMVPS+SA A PEV GI+GFLPNQYDGVWPVYP+V +GMKSDDAFFKY+L+GG Sbjct: 352 KGFGISMVPSVSAVAAKPEVKGIDGFLPNQYDGVWPVYPTVPVQGMKSDDAFFKYILSGG 411 Query: 421 DLDATISDLNKRYNAALDDAIKNDGLKAEPDPSFDPAALAGKFAK 465 DLD+ I DLN RYNAALD AI + +KAEP F+P LAG++AK Sbjct: 412 DLDSIIDDLNTRYNAALDAAIASGEVKAEPMADFNPLDLAGQYAK 456 >B3KEQ6.1 B3KEQ6_9BACI Extracellular solute-binding protein family 1 Length = 510 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 249/467 (53%), Positives = 332/467 (71%), Gaps = 5/467 (1%) Query: 1 MKKQLLLTSLSAVLAFGLAACGNSNTAENSGEASNA--GKTSDAGAASGEKTKITYWTGD 58 M+K+ L LS +LA G+A CG ++ + N G + G T+ +G+ ++ YWT D Sbjct: 44 MRKKWLSLGLSLILAAGIAGCGGNDNSSNGGTTNGKSDGGTTAPSTETGQPVQLKYWTDD 103 Query: 59 RHDAEFVKEKVAEFNKTNTDGIEVELVVKGDDFDTALDLSFQTSDSPDVIRVKENTIGTF 118 RHD E++KE + +FN+TN D I+VEL V +++ ++D++F ++ +PDV+R+K F Sbjct: 104 RHDQEYIKELINKFNETNGDNIQVELTVMSENYAQSVDIAFSSNQAPDVLRLKSANTSGF 163 Query: 119 YKKEYLAPIDEYLSDDMKAKFPEMT--DLNIFDGKRYSLPNYGTTMRLIYNKDLFAKAGV 176 KK YLAPIDEYL+DD+KAKF + D+N FDGK YSL N G TMRL+YNKDLFAKAG+ Sbjct: 164 VKKGYLAPIDEYLTDDLKAKFGSLLIDDVNRFDGKVYSLANTGLTMRLVYNKDLFAKAGI 223 Query: 177 TNPPTTLQELVDTAKKLTAAGKADGAYGFAQNFKSPASAFGRSARVIAEMSGFGGFGYDF 236 NPP +LQE+V+ AKK+T GKA+G YGFA NFK+P AF RS R I +SG+ G G+D Sbjct: 224 ENPPKSLQEMVEDAKKITEVGKAEGIYGFALNFKNPKQAFDRSVREILSLSGYQGLGFDL 283 Query: 237 KTARFDFSGFKPIIEAFKQIRDDGSMLPGVESLDIDPLRAQFAEGKIGMYLSYSSEPGVY 296 KT +FDF + +IE FKQ+ DGS+LPG E+LDIDPLRAQFA GKIGMYLS+S+EPGVY Sbjct: 284 KTGQFDFEPYSQVIEYFKQMHKDGSILPGAEALDIDPLRAQFAAGKIGMYLSFSTEPGVY 343 Query: 297 STQFPAKIDWAAAPAPTIDGKVKGASGFL-GGQWLALSSKSKHKDAAWKFMEYMYSDQML 355 QFP +I+W A APT+DG++KG S + G WL +S++S +K+AAWKFM+YMY D++L Sbjct: 344 MDQFPTEINWGGALAPTLDGEIKGTSEIVSAGTWLGISAQSANKEAAWKFMQYMYGDEVL 403 Query: 356 TTYQEKGFGISMVPSISAAAKTPEVNGIEGFLPNQYDGVWPVYPSVAPEGMKSDDAFFKY 415 TY EKGFGI++VPSI AK PE+NG+EGFL ++D +WP P+V PEG DAFFKY Sbjct: 404 KTYHEKGFGIAIVPSIVEQAKDPEINGMEGFLVGEHDSLWPASPNVTPEGSTYADAFFKY 463 Query: 416 MLNGGDLDATISDLNKRYNAALDDAIKNDGLKAEPDPSFDPAALAGK 462 +L DL A DLN RYNAAL A++ + P+P+FDP G+ Sbjct: 464 ILTDEDLKAITEDLNTRYNAALSKAVEKGEVTVTPNPAFDPTKPQGE 510 >B1D7Q4.1 B1D7Q4_9BACL Extracellular solute-binding protein family 1 Length = 475 Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust. Identities = 252/475 (53%), Positives = 339/475 (71%), Gaps = 10/475 (2%) Query: 1 MKKQLLLTSLSAVLAFGLAAC----GNS-NTAENSGEAS--NAGKTSDAGAASGEKTKIT 53 M K + +++AVLA L+AC GNS NT++ + EA+ ++ S G EK K+ Sbjct: 1 MLKNTRIVAVAAVLALSLSACSSGNGNSTNTSKGTNEAAPQSSNDASAQGTTKAEKVKLN 60 Query: 54 YWTGDRHDAEFVKEKVAEFNKTNTDGIEVELVVKGDDFDTALDLSFQTSDSPDVIRVKEN 113 YWT DRHD +++E V FN+TNTD IEVEL ++++ ++D++F + +PD+IR + Sbjct: 61 YWTEDRHDLTYIQEVVDRFNETNTDNIEVELKGLSENYNQSVDIAFSSKQAPDIIRTTPS 120 Query: 114 TIGTFYKKEYLAPIDEYLSDDMKAKF-PEMTDL-NIFDGKRYSLPNYGTTMRLIYNKDLF 171 F KK YL P+D YL+D+MK KF P + D N+ +G+ YSLPNYG + RLIYN DLF Sbjct: 121 NFIPFVKKGYLEPLDGYLNDEMKTKFQPALVDKSNMMNGQIYSLPNYGYSSRLIYNVDLF 180 Query: 172 AKAGVTNPPTTLQELVDTAKKLTAAGKADGAYGFAQNFKSPASAFGRSARVIAEMSGFGG 231 KAG+T+PPTTL ++V+ AKKLT AGK GAYGFA NFK ++F ++ R IAE+SG GG Sbjct: 181 EKAGITSPPTTLNDMVEVAKKLTEAGKDIGAYGFAINFKGADNSFEKAPRSIAELSGLGG 240 Query: 232 FGYDFKTARFDFSGFKPIIEAFKQIRDDGSMLPGVESLDIDPLRAQFAEGKIGMYLSYSS 291 +GYDFKT ++DFSGF I++AFKQ++DDGSMLPGVE+LDIDPLRAQFAEGKIGMYLS S+ Sbjct: 241 YGYDFKTGKYDFSGFTDIMKAFKQMKDDGSMLPGVEALDIDPLRAQFAEGKIGMYLSISA 300 Query: 292 EPGVYSTQFPAKIDWAAAPAPTIDGKVKGASGFL-GGQWLALSSKSKHKDAAWKFMEYMY 350 EP VY TQFP K++W+AA PTI+G + G +G+ G WL++SS++K+K AW F+EYMY Sbjct: 301 EPYVYQTQFPTKVNWSAALPPTINGNIAGVAGYWKTGPWLSISSQTKNKKEAWTFLEYMY 360 Query: 351 SDQMLTTYQEKGFGISMVPSISAAAKTPEVNGIEGFLPNQYDGVWPVYPSVAPEGMKSDD 410 SD++L TY E G+G+S++P I A +K PE+ G+ GFLP QYDG+WP+ PSV EG + Sbjct: 361 SDEVLKTYYEDGYGMSLLPEIVAQSKNPEMPGVAGFLPTQYDGLWPISPSVTVEGTSFSN 420 Query: 411 AFFKYMLNGGDLDATISDLNKRYNAALDDAIKNDGLKAEPDPSFDPAALAGKFAK 465 F KY+++GGDLD ISD N RYNAALD A + + E P FD ++ G K Sbjct: 421 LFIKYVISGGDLDKMISDANTRYNAALDKARASGDVTTEAMPDFDAKSMQGMLVK 475 >A9KI47.1 A9KI47_CLOPH Extracellular solute-binding protein family 1 Length = 465 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 159/468 (33%), Positives = 242/468 (51%), Gaps = 21/468 (4%) Query: 1 MKKQLLLTSLSAVLAFGLAACGNSNTAENSGEASNAGKTSDAGAASGEKTKITYWTGDRH 60 +K +L V+ GL C N N+ + ++ +K +T WT DRH Sbjct: 4 IKNSVLSILFVVVMLIGLTGCDNLK--------RNSASSLESKVEEKKKKIVTVWTKDRH 55 Query: 61 DAEFVKEKVAEFNKTNTDGIEVELVVKGDDFDTALDLSFQTSDSPDVIRVKENTIGTFYK 120 DAEF EK+ E+N +N+D IE+ + D++ A+DL+FQ++ +PD++ + Sbjct: 56 DAEFQLEKIEEYNASNSDNIEIRYSIFSDNYLQAVDLAFQSNSAPDILVFTSQVFNNYVV 115 Query: 121 KEYLAPIDEYLSDDMKAKFPE--MTDLNIFDGKRYSLPNYGTTMRLIYNKDLFAKAGVTN 178 + A + ++ + K F + LN+ DGK Y +P T RL YNKD+F + GV Sbjct: 116 SDQFADLTPFMDKEFKETFSSSMIEGLNVIDGKCYYIPTAATICRLFYNKDIFERVGVLE 175 Query: 179 PPTTLQELVDTAKKLTAAGKADGAYGFAQNFKSPASAFGRSARVIAEMSGFGGFGYDFKT 238 PP TL E+V+ A+K+T +G YGF+ N K P SA RS +A+M G+DFK Sbjct: 176 PPRTLDEMVEIAQKITKELSGEGIYGFSANMKYPNSALNRSLMPMAQMGLGIRSGFDFKK 235 Query: 239 ARFDFSGFKPIIEAFKQIRDDGSMLPGVESLDIDPLRAQFAEGKIGMYLSYS-SEPGVYS 297 +DFSG++ I+E ++ + P +SLDIDPLR FA GKIGMY+SY+ SE GVY Sbjct: 236 GVYDFSGYQTILEEWRTLLSPECAYPNSDSLDIDPLRKLFAAGKIGMYMSYAHSELGVYE 295 Query: 298 TQFPAKIDWAAAPAPTIDGKVKGASGFLGGQWLALSSKSKHKDAAWKFMEYMYSD-QMLT 356 QFP + +W P + G + GA + ++KSK+ DAAWK +++D L Sbjct: 296 NQFPMEQEWRCTEIPVVGGIILGAQNYSLNNGYLFNAKSKNLDAAWKAYVSVFADIDNLA 355 Query: 357 TYQEKGFGISMVPSISAAAKTPEVNGIE--GFLPNQYDGVWPVYP------SVAPEGMKS 408 Y +G GIS VP + A T + I+ L + D +WP P ++ +G+ Sbjct: 356 EYHSQGLGISTVPKVLERA-TLNQSYIDNPALLVGENDKIWPKVPHEANVNAIVVDGLDM 414 Query: 409 DDAFFKYMLNGGDLDATISDLNKRYNAALDDAIKNDGLKAEPDPSFDP 456 + F + + D+ +SDL KRYN A + I + + FDP Sbjct: 415 YNTFAELIYGTMDIKEGLSDLTKRYNKAYQEGINSGIGEVYKIDDFDP 462 >A8S1I5.1 A8S1I5_9CLOT Putative uncharacterized protein Length = 436 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 33/381 (8%) Query: 3 KQLLLTSLSAVLAFGLAACGNSNTAEN--SGEASN-AGKTSDAG---AASGEKTKITYWT 56 ++ L +++A +A GL +S E +GEAS G+ +D+G A+GE+T I +W Sbjct: 6 RRTLSVTVAAAMAMGLMTGCSSGKGEQKPAGEASGPQGQAADSGKQAGAAGEQTTIKFWD 65 Query: 57 GDRHDAEFVKEKVAEFNKTNTDGIEVELVVKGDDFDTALDLSFQTSDSPDVIRVKENTIG 116 G+ +A + E A +N+ + D I++E + D + L+ +PDV+ + + Sbjct: 66 GNWQEAVW-PEVEAIWNQEHPD-IKIEAEFQADLANDKYMLALTNGTAPDVMACALDWVT 123 Query: 117 TFYKKEYLAPIDEYLSDDM--KAKFPE-MTDLNIFDGKRYSLPNYGTTMRLIYNKDLFAK 173 TF L P+DEY++ D ++F + D + DGK Y LP T + YNKD+ + Sbjct: 124 TFGSANLLEPLDEYVAKDSFDVSQFVQGANDASTVDGKLYGLPFRSETYVMYYNKDILSA 183 Query: 174 AGVTNPPTTLQELVDTAKKLTAAGKADGAYGFAQNFKSPASAFGRSARVIAEMSGFGGFG 233 AG PP T +E+ K++ AA YG+ + S F + SG Sbjct: 184 AGYDTPPATWEEV----KEVAAACTNGDVYGYGL-CGTNYSNFSFQYITMLRSSGSDILN 238 Query: 234 YDFKTARFDFSGFKPIIEAFKQIRDDGSMLPGVESLDIDPL--RAQFAEGKIGMYLSYSS 291 D + G +E + +D + P L+ D + R FA GKI MYLS Sbjct: 239 ADNSASEL---GNSVAVETAQLYKDLAAYSPA-SLLENDNIANRTLFASGKIAMYLS--- 291 Query: 292 EPGVYSTQFPAK----IDWAAAPAPTIDGKVKGASGFLGGQWLALSSKSKHKDAAWKFME 347 G+Y + K +++A A PT +G + LGG +A++ SK K+AAW+F++ Sbjct: 292 --GIYDLEEIVKTNPDLNFACAMVPTANGAERNT--ILGGWSVAVAECSKEKEAAWEFVK 347 Query: 348 YMYSDQMLTTYQEKGFGISMV 368 ++ + Y G + V Sbjct: 348 FLTRPDIAAIYTNTFTGTAEV 368 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,914,918,758 Number of extensions: 129005834 Number of successful extensions: 269693 Number of sequences better than 1.0e-05: 1746 Number of HSP's gapped: 269317 Number of HSP's successfully gapped: 1748 Length of query: 465 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 326 Effective length of database: 1,751,175,118 Effective search space: 570883088468 Effective search space used: 570883088468 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 133 (55.8 bits)