BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0385.0012.p (333 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5N9.1 B3K5N9_9BACI Glycosidase PH1107-related 571 e-161 B3KEQ9.1 B3KEQ9_9BACI Glycosidase PH1107-related 517 e-145 A6PP50.1 A6PP50_9BACT Glycosidase, PH1107-related 383 e-104 C0A632.1 C0A632_9BACT Putative uncharacterized protein 368 e-100 Q6AKE2.1 Q6AKE2_DESPS Putative uncharacterized protein 226 2e-57 >B3K5N9.1 B3K5N9_9BACI Glycosidase PH1107-related Length = 333 Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust. Identities = 264/324 (81%), Positives = 295/324 (91%) Query: 9 LTSSPVIHRYEGNPVLDASKVPYNTALVFNAGVTKFKGKYVMVFRNDYGSLADQTIEPHH 68 L SS VI R+ NP+LDAS+VPY TALVFNAGVTKF GKYVMVFRNDYGS+ +T+EPHH Sbjct: 9 LISSSVIRRHPDNPILDASRVPYPTALVFNAGVTKFNGKYVMVFRNDYGSVERRTLEPHH 68 Query: 69 TTDLGIAFSDDGIHWEASPKKCFKLHDEEIIRAYDPRLTVIGDRCYMCFAVDTRHGIRGG 128 TTDLG+AFSDDG+HWE PK CFKLHD+EIIRAYDPRLTVI RCYMCFAVDT+HGIRGG Sbjct: 69 TTDLGVAFSDDGVHWEVQPKPCFKLHDQEIIRAYDPRLTVIDGRCYMCFAVDTQHGIRGG 128 Query: 129 IAVTDDFEEFEILSLSSPDLRNMVLFPEKIGGNYVRLERPFTVYSRGGKDRFDTWISESP 188 +AVTDDF FEILSLS+PDLRNMVLFPEKIGGNYVRLERPFTVYSRGG DRFD WISESP Sbjct: 129 VAVTDDFVSFEILSLSTPDLRNMVLFPEKIGGNYVRLERPFTVYSRGGVDRFDMWISESP 188 Query: 189 DLKYWGNSDLLLAVEHVPFANDKVGPAAPPVKTDKGWLTTFHAVDIDPSRGKHGWEPAWK 248 DLKYWGNS LLLAVE V FANDK+GPAAPP+KT GWLT+FHAVD+DP+RGK+GWEP+WK Sbjct: 189 DLKYWGNSGLLLAVEDVAFANDKIGPAAPPIKTKFGWLTSFHAVDLDPARGKNGWEPSWK 248 Query: 249 KRYTAGIMLLDLDNPKKILGMYKQPLLAPETSYEIDGGFRNNVIFPGGMILEDNGEVKIY 308 KRYTAG+M+LDLDNPKKI+GMYK+PLL PE SYE +GGFRNNVIFPGGMILE++GEVKIY Sbjct: 249 KRYTAGLMMLDLDNPKKIIGMYKEPLLTPEVSYETEGGFRNNVIFPGGMILEEDGEVKIY 308 Query: 309 YGSADTIECLATAHVDDLVSLCLK 332 YG+AD +ECLATAH+D+L+ LCL Sbjct: 309 YGAADAVECLATAHIDELIQLCLN 332 >B3KEQ9.1 B3KEQ9_9BACI Glycosidase PH1107-related Length = 337 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 242/325 (74%), Positives = 274/325 (84%) Query: 9 LTSSPVIHRYEGNPVLDASKVPYNTALVFNAGVTKFKGKYVMVFRNDYGSLADQTIEPHH 68 L SSP++ R+ NP+L VPY A+VFNAGV KFKGKYVMVFRNDYG + PHH Sbjct: 9 LFSSPIMTRHSANPILTPGDVPYGPAMVFNAGVAKFKGKYVMVFRNDYGDELKGIVAPHH 68 Query: 69 TTDLGIAFSDDGIHWEASPKKCFKLHDEEIIRAYDPRLTVIGDRCYMCFAVDTRHGIRGG 128 TT+LG+AFSDDGI W+ PK C+ HDEE+IR YDPRLTVIG++CYMCFAVDT+HG+RGG Sbjct: 69 TTNLGLAFSDDGIKWDVQPKPCWSWHDEEVIRVYDPRLTVIGEQCYMCFAVDTKHGLRGG 128 Query: 129 IAVTDDFEEFEILSLSSPDLRNMVLFPEKIGGNYVRLERPFTVYSRGGKDRFDTWISESP 188 IAVT+DF FE+LSLS PD RNMVLFPE+IGG YVRLERP VYSRGG DRFD W+S+SP Sbjct: 129 IAVTEDFRSFEVLSLSLPDNRNMVLFPERIGGKYVRLERPMPVYSRGGIDRFDMWMSDSP 188 Query: 189 DLKYWGNSDLLLAVEHVPFANDKVGPAAPPVKTDKGWLTTFHAVDIDPSRGKHGWEPAWK 248 DLKYWGNS LLLAVE V +ANDKVGP APPVKTDKGWLT FHAVDIDPSRGK+GWE +WK Sbjct: 189 DLKYWGNSKLLLAVEDVAYANDKVGPGAPPVKTDKGWLTLFHAVDIDPSRGKNGWEDSWK 248 Query: 249 KRYTAGIMLLDLDNPKKILGMYKQPLLAPETSYEIDGGFRNNVIFPGGMILEDNGEVKIY 308 KRYT GI+LLDL +P +I+G + PLLAPE YE DGGFRN+VIFPGGMILED GEVKIY Sbjct: 249 KRYTTGILLLDLADPSRIIGRAETPLLAPEADYETDGGFRNHVIFPGGMILEDTGEVKIY 308 Query: 309 YGSADTIECLATAHVDDLVSLCLKG 333 YG+ADT+ECLATAHVDDL+ LCLKG Sbjct: 309 YGAADTVECLATAHVDDLLHLCLKG 333 >A6PP50.1 A6PP50_9BACT Glycosidase, PH1107-related Length = 331 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 189/324 (58%), Positives = 237/324 (73%), Gaps = 14/324 (4%) Query: 17 RYEGNPVLDASKVPYNTALVFNAGVTKFKGKYVMVFRNDYGSLADQTIEPHHTTDLGIAF 76 R+ NPVL A +P++ +L+FNAGV KF G+YVMVFRND G + + + T+LGIA+ Sbjct: 5 RHPSNPVLSAKDIPFDASLIFNAGVCKFNGRYVMVFRNDVGFGPNGYGKTY--TNLGIAY 62 Query: 77 SDDGIHWEASPKKC-----FKLHDEEIIRAYDPRLTVIGDRCYMCFAVDTRHGIRGGIAV 131 S DG+ WE P+ D E+ R YDPRLTVI RCY+CFAVDT HG+RGGIAV Sbjct: 63 SSDGVKWEVQPRPWKVAADIVAADPELSRFYDPRLTVIDGRCYLCFAVDTMHGVRGGIAV 122 Query: 132 TDDFEEFEILSLSSPDLRNMVLFPEKIGGNYVRLERPFTVYSRGGKDRFDTWISESPDLK 191 TDDF+ FE+LS+S+PD RNMVLFPEK G +VRLERPF YSRG +++FD W S SPD + Sbjct: 123 TDDFDHFEVLSMSAPDNRNMVLFPEKFDGKFVRLERPFPEYSRGYQEKFDIWSSMSPDCR 182 Query: 192 YWGNSDLLLAVEHVPFANDKVGPAAPPVKTDKGWLTTFHAVDIDPSRGKHGWEPA----- 246 YWG++ L+L +E VP+AN K+GPAAPP+KT KGWL TFHA D SR GWE A Sbjct: 183 YWGDTRLVLGMEDVPYANAKIGPAAPPIKTPKGWLCTFHATYKDMSRNLFGWENANNPDV 242 Query: 247 -WKKRYTAGIMLLDLDNPKKILGMYKQPLLAPETSYEIDGGFRNNVIFPGGMILEDNGEV 305 W K Y G+MLL LD+P+K++G+ +PLL YE++ GFR +VIFPGGM+LED+GEV Sbjct: 243 TWNKEYFGGLMLLALDDPQKVIGLAPEPLLKATEKYELE-GFRGSVIFPGGMLLEDDGEV 301 Query: 306 KIYYGSADTIECLATAHVDDLVSL 329 KIYYG ADT+ECLATA VDDL++L Sbjct: 302 KIYYGGADTVECLATASVDDLLAL 325 >C0A632.1 C0A632_9BACT Putative uncharacterized protein Length = 377 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/340 (52%), Positives = 234/340 (68%), Gaps = 20/340 (5%) Query: 8 ILTSSPVIHRYEGNPVLDASKVPYNTALVFNAGVTKFKGKYVMVFRNDYGSLADQTIEPH 67 +L S ++ R+ NPVL + P+ VFNAGV K++G+YVM+FRNDYG+ P Sbjct: 22 VLFSDAMLTRHPANPVLKHTDCPFKATTVFNAGVAKYQGRYVMLFRNDYGTWGQPP--PF 79 Query: 68 HTTDLGIAFSDDGIHWEASPKKCF----------------KLHDEEIIRAYDPRLTVIGD 111 T+LG+A+SDDGI W + + F + +EI R YDPR+TV+ Sbjct: 80 EGTNLGLAWSDDGIKWTVTKEPVFDEERARVALAGLYNVKRFGPQEIRRVYDPRITVVDG 139 Query: 112 RCYMCFAVDTRHGIRGGIAVTDDFEEFEILSLSSPDLRNMVLFPEKIGGNYVRLERPFTV 171 R +CFAVDT HG+ GG+A T+DF F+ LSLS+PD RNMV+FPEKIGG YVRLERPF + Sbjct: 140 RLILCFAVDTAHGVLGGVATTEDFSSFKFLSLSTPDNRNMVVFPEKIGGEYVRLERPFPI 199 Query: 172 YSRGGKDRFDTWISESPDLKYWGNSDLLLAVEHVPFANDKVGPAAPPVKTDKGWLTTFHA 231 Y RG + F+ W S SPDL YWG++ L+L E VPFAN K+GPAAPPV+T GWLT H+ Sbjct: 200 YGRGKPEAFEIWASRSPDLCYWGDTRLVLGSEEVPFANSKIGPAAPPVRTRAGWLTPIHS 259 Query: 232 VDIDPSRGKHGWEPA-WKKRYTAGIMLLDLDNPKKILGMYKQPLLAPETSYEIDGGFRNN 290 V D GWE + W KRY AG+MLLDL++P K++G+ ++PLL PE YE+D GFR + Sbjct: 260 VFKDELHPLKGWEKSPWIKRYDAGLMLLDLEDPTKVIGLCRKPLLTPEADYELD-GFRGS 318 Query: 291 VIFPGGMILEDNGEVKIYYGSADTIECLATAHVDDLVSLC 330 VIFP G+ILEDNGE ++YYG+ADT+ +A+AHVDDL++ C Sbjct: 319 VIFPCGLILEDNGEARLYYGAADTVVAMASAHVDDLIAAC 358 >Q6AKE2.1 Q6AKE2_DESPS Putative uncharacterized protein Length = 309 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 129/326 (39%), Positives = 186/326 (57%), Gaps = 32/326 (9%) Query: 14 VIHRYEGNPVLDASKVPYNTALVFNAGVTKFKGKYVMVFRNDYGSLADQTIEPHHTTDLG 73 +IHRYE NP+L VPY A V NAGVTKF KY+M+FR+ S + LG Sbjct: 3 IIHRYEKNPILSKDDVPYPVATVHNAGVTKFNDKYIMIFRSHLTS---------GRSILG 53 Query: 74 IAFSDDGIHWEASPKKCFKLHDEEIIRAY------DPRLTVIGDRCYMCFAVDTRHGIRG 127 +A SDDG ++ S K E + + Y DPR+T I D + ++ +R+G+R Sbjct: 54 LAVSDDGFRFKVSDKPFMTPAKEGLFQIYEEYGLEDPRITCIDDEYLITYSAYSRYGVRI 113 Query: 128 GIAVTDDFEEFEILSL-SSPDLRNMVLFPEKIGGNYVRLERPFTVYSRGGKDRFDTWISE 186 +A T DF+ + ++L + D RN+V+FPEKI G YVR++RP + S + WIS Sbjct: 114 ALAKTRDFKTIQRVALITEADYRNLVIFPEKIDGMYVRMDRPHSEISP-----WSIWISY 168 Query: 187 SPDLKYWGNSDLLLAVEHVPFANDKVGPAAPPVKTDKGWLTTFHAVDIDPSRGKHGWEPA 246 SPDLKYWG++ +++ + K+GP APP+KTD+GWL +H ++ Sbjct: 169 SPDLKYWGDAKVIMKPAAYHWDEMKIGPGAPPIKTDQGWLNIYHG----------AFQTM 218 Query: 247 WKKRYTAGIMLLDLDNPKKILGMYKQPLLAPETSYEIDGGFRNNVIFPGGMILEDNGEVK 306 Y G+ L DL +P KI G+ +L PET YE G+ NV+F G + E +G +K Sbjct: 219 AGCVYRLGVALHDLADPSKIRGVSDDWILEPETEYE-RIGYVPNVVFTCGAVPEPDGTLK 277 Query: 307 IYYGSADTIECLATAHVDDLVSLCLK 332 IY+G+ADT+ C TA + DLV+LCL+ Sbjct: 278 IYWGAADTVMCAGTASIKDLVNLCLQ 303 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.140 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,265,706,575 Number of extensions: 102574367 Number of successful extensions: 174734 Number of sequences better than 1.0e-05: 274 Number of HSP's gapped: 173712 Number of HSP's successfully gapped: 275 Length of query: 333 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 197 Effective length of database: 1,779,438,163 Effective search space: 350549318111 Effective search space used: 350549318111 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)